RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 CAMK2GQ13555 558 aaPredicted RBP6.54□□□□□ -1.36
NEAT1-205ENST00000616315 TIGD5Q53EQ6 642 aa6.54□□□□□ -1.36
NEAT1-205ENST00000616315 GOLM1Q8NBJ4 401 aa6.54□□□□□ -1.36
NEAT1-205ENST00000616315 DPH2Q9BQC3 489 aaPredicted RBP6.54□□□□□ -1.36
NEAT1-205ENST00000616315 LNPKQ9C0E8 428 aa6.54□□□□□ -1.36
NEAT1-205ENST00000616315 GREM1O60565 184 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 SSBP05455 408 aaKnown RBP eCLIP6.53□□□□□ -1.36
NEAT1-205ENST00000616315 BMP7P18075 431 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 CYP7A1P22680 504 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 NASPP49321 788 aaPredicted RBP6.53□□□□□ -1.36
NEAT1-205ENST00000616315 DLG4P78352 724 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 RBL2Q08999 1139 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 APOBRQ0VD83 1088 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 COL9A2Q14055 689 aaPredicted RBP6.53□□□□□ -1.36
NEAT1-205ENST00000616315 GAB4Q2WGN9 574 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 SOGA3Q5TF21 947 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 BAHD1Q8TBE0 780 aaPredicted RBP6.53□□□□□ -1.36
NEAT1-205ENST00000616315 PIWIL2Q8TC59 973 aaKnown RBP6.53□□□□□ -1.36
NEAT1-205ENST00000616315 COX4I2Q96KJ9 171 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 TJP2Q9UDY2 1190 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 STRIP2Q9ULQ0 834 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 EFR3BQ9Y2G0 817 aa6.53□□□□□ -1.36
NEAT1-205ENST00000616315 GFRA2O00451 464 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 ZGLP1P0C6A0 271 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 TPP2P29144 1249 aaPredicted RBP6.52□□□□□ -1.37
NEAT1-205ENST00000616315 SOX9P48436 509 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 FAM196AQ6ZSG2 479 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 CCDC84Q86UT8 332 aaPredicted RBP6.52□□□□□ -1.37
NEAT1-205ENST00000616315 PMFBP1Q8TBY8 1022 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 MIR1-1HGQ9H1L0 117 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 ZCCHC4Q9H5U6 513 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 GINM1Q9NU53 330 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
NEAT1-205ENST00000616315 FOXD2O60548 495 aaPredicted RBP6.51□□□□□ -1.37
NEAT1-205ENST00000616315 DIEXFQ68CQ4 756 aaKnown RBP6.51□□□□□ -1.37
NEAT1-205ENST00000616315 ZNF605Q86T29 641 aa6.51□□□□□ -1.37
NEAT1-205ENST00000616315 DNAJB8Q8NHS0 232 aa6.51□□□□□ -1.37
NEAT1-205ENST00000616315 KCNC2Q96PR1 638 aa6.51□□□□□ -1.37
NEAT1-205ENST00000616315 LRRC3Q9BY71 257 aa6.51□□□□□ -1.37
NEAT1-205ENST00000616315 GCM1Q9NP62 436 aa6.51□□□□□ -1.37
NEAT1-205ENST00000616315 ROBO2Q9HCK4 1378 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 SMARCA5O60264 1052 aaPredicted RBP6.5□□□□□ -1.37
NEAT1-205ENST00000616315 CRKP46108 304 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 CCDC144BQ3MJ40 725 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 IRF2BP1Q8IU81 584 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 CKAP2LQ8IYA6 745 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 FAM177A1Q8N128 213 aaPredicted RBP6.5□□□□□ -1.37
NEAT1-205ENST00000616315 PDZD8Q8NEN9 1154 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 NKD1Q969G9 470 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 SGPP1Q9BX95 441 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 PCDHB5Q9Y5E4 795 aa6.5□□□□□ -1.37
NEAT1-205ENST00000616315 F13A1P00488 732 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 EGR3Q06889 387 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 SEPT6Q14141 434 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 NBPF6Q5VWK0 638 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 BNC2Q6ZN30 1099 aaPredicted RBP6.49□□□□□ -1.37
NEAT1-205ENST00000616315 NOP9Q86U38 636 aaKnown RBP6.49□□□□□ -1.37
NEAT1-205ENST00000616315 SLITRK4Q8IW52 837 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 MRPL41Q8IXM3 137 aaKnown RBP6.49□□□□□ -1.37
NEAT1-205ENST00000616315 GATAD2BQ8WXI9 593 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 NBPF4Q96M43 638 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 OSBPL2Q9H1P3 480 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 ZNF408Q9H9D4 720 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 DUSP13Q9UII6 198 aa6.49□□□□□ -1.37
NEAT1-205ENST00000616315 TLR3O15455 904 aaKnown RBP6.48□□□□□ -1.37
NEAT1-205ENST00000616315 PEX10O60683 326 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 TRIM13O60858 407 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 KRTAP10-2P60368 255 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 MPP2Q14168 576 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 CWF19L2Q2TBE0 894 aaKnown RBP6.48□□□□□ -1.37
NEAT1-205ENST00000616315 SEZ6Q53EL9 994 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 LILRA2Q8N149 483 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 MARCH10Q8NA82 808 aaPredicted RBP6.48□□□□□ -1.37
NEAT1-205ENST00000616315 PPP1R13LQ8WUF5 828 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 CPLX3Q8WVH0 158 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 JARID2Q92833 1246 aaPredicted RBP6.48□□□□□ -1.37
NEAT1-205ENST00000616315 INTS4Q96HW7 963 aaKnown RBP6.48□□□□□ -1.37
NEAT1-205ENST00000616315 TMEM87BQ96K49 555 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 SLC6A17Q9H1V8 727 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 ZNF552Q9H707 407 aaPredicted RBP6.48□□□□□ -1.37
NEAT1-205ENST00000616315 EBF1Q9UH73 591 aa6.48□□□□□ -1.37
NEAT1-205ENST00000616315 CNOT6Q9ULM6 557 aaKnown RBP6.48□□□□□ -1.37
NEAT1-205ENST00000616315 YBX2Q9Y2T7 364 aaKnown RBP6.48□□□□□ -1.37
NEAT1-205ENST00000616315 FAM221AA4D161 298 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 SEMA7AO75326 666 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 CILPO75339 1184 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 BPNT1O95861 308 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 PGRP06401 933 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 CANXP27824 592 aaKnown RBP6.47□□□□□ -1.37
NEAT1-205ENST00000616315 ETV3P41162 512 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 GIMAP6Q6P9H5 292 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 TSPYL5Q86VY4 417 aaPredicted RBP6.47□□□□□ -1.37
NEAT1-205ENST00000616315 FBXO27Q8NI29 283 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 SRRTQ9BXP5 876 aaKnown RBP6.47□□□□□ -1.37
NEAT1-205ENST00000616315 GPR62Q9BZJ7 368 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 ZSWIM4Q9H7M6 989 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 KCTD3Q9Y597 815 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 PCDHA11Q9Y5I1 949 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 MRVI1Q9Y6F6 885 aa6.47□□□□□ -1.37
NEAT1-205ENST00000616315 TEX51A0A1B0GUA7 166 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms