RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CNNM3Q8NE01 707 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 C8orf37Q96NL8 207 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SUGT1Q9Y2Z0 365 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PCDHB6Q9Y5E3 794 aa12.33□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PLA2G4AP47712 749 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 FAM193AP78312 1265 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GRM4Q14833 912 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ZNF804AQ7Z570 1209 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CLIC6Q96NY7 704 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 VPS18Q9P253 973 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 KCNJ14Q9UNX9 436 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GREB1LQ9C091 1923 aaPredicted RBP12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RGPD3A6NKT7 1758 aaPredicted RBP12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RGPD4Q7Z3J3 1758 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 NFIXQ14938 502 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 AMIGO3Q86WK7 504 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CRAMP1Q96RY5 1269 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 IRX2Q9BZI1 471 aaPredicted RBP12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 IQSEC3Q9UPP2 1182 aaPredicted RBP12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PCDHA5Q9Y5H7 936 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 BBOX1O75936 387 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 BMP6P22004 513 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CALML3P27482 149 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 OLFM4Q6UX06 510 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SRBD1Q8N5C6 995 aaKnown RBP12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 LZTFL1Q9NQ48 299 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 MAN1B1Q9UKM7 699 aa12.32□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GAKO14976 1311 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 FAM205AQ6ZU69 1335 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 BAG3O95817 575 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 HSPA1LP34931 641 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 FANCCQ00597 558 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TBX2Q13207 712 aaPredicted RBP12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ZSCAN26Q16670 478 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RHOXF2BP0C7M4 288 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SCG2P13521 617 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PRDX5P30044 214 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RFC4P35249 363 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ORC2Q13416 577 aaPredicted RBP12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PNOCQ13519 176 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ARMCX5Q6P1M9 558 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RHOXF2Q9BQY4 288 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 FHOD1Q9Y613 1164 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ANKRD31Q8N7Z5 1873 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 LDHBP07195 334 aaKnown RBP12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 NR5A1Q13285 461 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 VSTM4Q8IW00 320 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SUGCTQ9HAC7 445 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ZNF287Q9HBT7 754 aa12.31□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CCP110O43303 1012 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 COBLO75128 1261 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PLEKHA8P1O95397 391 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 ADKP55263 362 aaKnown RBP12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TXNRD3Q86VQ6 643 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 NUP133Q8WUM0 1156 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 DRC1Q96MC2 740 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CABP5Q9NP86 173 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 IL17RBQ9NRM6 502 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PLCG2P16885 1265 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GPS2Q13227 327 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SMC1AQ14683 1233 aaKnown RBP12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 E2F4Q16254 413 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PRR5LQ6MZQ0 368 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CSRNP2Q9H175 543 aa12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 V9GY48 417 aaPredicted RBP12.3□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 LAD1O00515 517 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CNBD1Q8NA66 436 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 RBM17Q96I25 401 aaKnown RBP12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 MYO3BQ8WXR4 1341 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 MYH1P12882 1939 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PALM3A6NDB9 673 aaPredicted RBP12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TMEM232C9JQI7 657 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 MYL1P05976 194 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 TBC1D22AQ8WUA7 517 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 DPF2Q92785 391 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 CYP2D7A0A087X1C5 515 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SMIM22K7EJ46 135 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 PLCD1P51178 756 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 UBASH3AP57075 661 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 DPYDQ12882 1025 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 KLHL10Q6JEL2 608 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 BICDL1Q6ZP65 573 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 C16orf86Q6ZW13 317 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 GPIHBP1Q8IV16 184 aa12.29□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
SENP3-EIF4A1-201ENST00000614237 LONP1P36776 959 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms