RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 TNKSO95271 1327 aa15.07■□□□□ 0
CCL4-201ENST00000613947 EPB41L2O43491 1005 aaKnown RBP15.06■□□□□ 0
CCL4-201ENST00000613947 SEC24BO95487 1268 aa15.06■□□□□ 0
CCL4-201ENST00000613947 ANTXR2P58335 489 aa15.06■□□□□ 0
CCL4-201ENST00000613947 CCDC178Q5BJE1 867 aa15.06■□□□□ 0
CCL4-201ENST00000613947 SLFN13Q68D06 897 aa15.06■□□□□ 0
CCL4-201ENST00000613947 MTMR7Q9Y216 660 aa15.06■□□□□ 0
CCL4-201ENST00000613947 MCCP23508 829 aa15.06■□□□□ 0
CCL4-201ENST00000613947 HERVK_113P62684 666 aa15.06■□□□□ 0
CCL4-201ENST00000613947 ADCK5Q3MIX3 580 aa15.06■□□□□ 0
CCL4-201ENST00000613947 NOM1Q5C9Z4 860 aaKnown RBP15.06■□□□□ 0
CCL4-201ENST00000613947 POTEEQ6S8J3 1075 aa15.06■□□□□ 0
CCL4-201ENST00000613947 ANKS1AQ92625 1134 aa15.06■□□□□ 0
CCL4-201ENST00000613947 CENPFP49454 3210 aa15.05■□□□□ -0
CCL4-201ENST00000613947 PEX10O60683 326 aa15.05■□□□□ -0
CCL4-201ENST00000613947 FLOT1O75955 427 aa15.05■□□□□ -0
CCL4-201ENST00000613947 BCRP11274 1271 aa15.05■□□□□ -0
CCL4-201ENST00000613947 COG2Q14746 738 aa15.05■□□□□ -0
CCL4-201ENST00000613947 RASGRP2Q7LDG7 609 aa15.05■□□□□ -0
CCL4-201ENST00000613947 ANKRD13CQ8N6S4 541 aa15.05■□□□□ -0
CCL4-201ENST00000613947 FBXO28Q9NVF7 368 aa15.05■□□□□ -0
CCL4-201ENST00000613947 SNX14Q9Y5W7 946 aa15.05■□□□□ -0
CCL4-201ENST00000613947 IFIT3O14879 490 aaKnown RBP15.04■□□□□ -0
CCL4-201ENST00000613947 FKTNO75072 461 aa15.04■□□□□ -0
CCL4-201ENST00000613947 BMP3P12645 472 aa15.04■□□□□ -0
CCL4-201ENST00000613947 XRCC6P12956 609 aaKnown RBP eCLIP15.04■□□□□ -0
CCL4-201ENST00000613947 MCM5P33992 734 aa15.04■□□□□ -0
CCL4-201ENST00000613947 SLC1A4P43007 532 aa15.04■□□□□ -0
CCL4-201ENST00000613947 MRE11P49959 708 aa15.04■□□□□ -0
CCL4-201ENST00000613947 SP3Q02447 781 aa15.04■□□□□ -0
CCL4-201ENST00000613947 SEC23AQ15436 765 aa15.04■□□□□ -0
CCL4-201ENST00000613947 NEK1Q96PY6 1258 aa15.04■□□□□ -0
CCL4-201ENST00000613947 TXNRD2Q9NNW7 524 aa15.04■□□□□ -0
CCL4-201ENST00000613947 HOXC10Q9NYD6 342 aa15.04■□□□□ -0
CCL4-201ENST00000613947 RBPJLQ9UBG7 517 aa15.04■□□□□ -0
CCL4-201ENST00000613947 SPDYE16A6NNV3 312 aaPredicted RBP15.03■□□□□ -0
CCL4-201ENST00000613947 PRC1O43663 620 aa15.03■□□□□ -0
CCL4-201ENST00000613947 MCM4P33991 863 aa15.03■□□□□ -0
CCL4-201ENST00000613947 GCLCP48506 637 aaPredicted RBP15.03■□□□□ -0
CCL4-201ENST00000613947 KRT32Q14532 448 aa15.03■□□□□ -0
CCL4-201ENST00000613947 IFIT1BQ5T764 474 aaKnown RBP15.03■□□□□ -0
CCL4-201ENST00000613947 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
CCL4-201ENST00000613947 IGDCC4Q8TDY8 1250 aa15.03■□□□□ -0
CCL4-201ENST00000613947 GMCL1Q96IK5 515 aa15.03■□□□□ -0
CCL4-201ENST00000613947 KAT14Q9H8E8 782 aa15.03■□□□□ -0
CCL4-201ENST00000613947 SENP2Q9HC62 589 aa15.03■□□□□ -0
CCL4-201ENST00000613947 PRDM10Q9NQV6 1147 aa15.03■□□□□ -0
CCL4-201ENST00000613947 RLFQ13129 1914 aa15.03■□□□□ -0
CCL4-201ENST00000613947 HTTP42858 3142 aa15.03■□□□□ -0
CCL4-201ENST00000613947 DSG3P32926 999 aa15.03■□□□□ -0
CCL4-201ENST00000613947 CAP1Q01518 475 aa15.03■□□□□ -0
CCL4-201ENST00000613947 SART3Q15020 963 aaKnown RBP15.03■□□□□ -0
CCL4-201ENST00000613947 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
CCL4-201ENST00000613947 KCTD1Q719H9 257 aa15.03■□□□□ -0
CCL4-201ENST00000613947 PNMA1Q8ND90 353 aa15.03■□□□□ -0
CCL4-201ENST00000613947 PKNOX2Q96KN3 472 aa15.03■□□□□ -0
CCL4-201ENST00000613947 GPHNQ9NQX3 736 aaPredicted RBP15.03■□□□□ -0
CCL4-201ENST00000613947 ERICH2A1L162 156 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 TMEM232C9JQI7 657 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 ECM2O94769 699 aaPredicted RBP15.02□□□□□ -0.01
CCL4-201ENST00000613947 PDHBP11177 359 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 WTAPQ15007 396 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 FAM110CQ1W6H9 321 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 LBX2Q6XYB7 198 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 ATG4CQ96DT6 458 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 PAGR1Q9BTK6 254 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 LRRC2Q9BYS8 371 aa15.02□□□□□ -0.01
CCL4-201ENST00000613947 HSP90AA1P07900 732 aaKnown RBP15.01□□□□□ -0.01
CCL4-201ENST00000613947 CPA1P15085 419 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 LACTBP83111 547 aaPredicted RBP15.01□□□□□ -0.01
CCL4-201ENST00000613947 Q3C1V9 767 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 DHX32Q7L7V1 743 aaKnown RBP15.01□□□□□ -0.01
CCL4-201ENST00000613947 CD99L2Q8TCZ2 262 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 GTF3C2Q8WUA4 911 aaPredicted RBP15.01□□□□□ -0.01
CCL4-201ENST00000613947 DCAF4Q8WV16 495 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 TCEANC2Q96MN5 208 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 JAKMIP1Q96N16 626 aaKnown RBP15.01□□□□□ -0.01
CCL4-201ENST00000613947 SLF1Q9BQI6 1058 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 ARHGAP39Q9C0H5 1083 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 CHMP5Q9NZZ3 219 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 MORF4L1Q9UBU8 362 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 FEM1BQ9UK73 627 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 PPP1R9AQ9ULJ8 1098 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 FRMPD2Q68DX3 1309 aaPredicted RBP15.01□□□□□ -0.01
CCL4-201ENST00000613947 CNMDO75829 334 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 SNHG28P0DPA3 235 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 CTGFP29279 349 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 EXOSC10Q01780 885 aaKnown RBP15.01□□□□□ -0.01
CCL4-201ENST00000613947 CCDC96Q2M329 555 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 PRPF38AQ8NAV1 312 aaKnown RBP15.01□□□□□ -0.01
CCL4-201ENST00000613947 GPRC5AQ8NFJ5 357 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 KIFC2Q96AC6 838 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 TMEM87BQ96K49 555 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 MTA3Q9BTC8 594 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 LY9Q9HBG7 655 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 BTBD7Q9P203 1132 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 ADAMTS5Q9UNA0 930 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 RABGAP1Q9Y3P9 1069 aa15.01□□□□□ -0.01
CCL4-201ENST00000613947 MYPNQ86TC9 1320 aa15□□□□□ -0.01
CCL4-201ENST00000613947 SH2B2O14492 632 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms