RNA–Protein interactions for RNA: ENST00000613864.4

TARDBP-215, Transcript of TAR DNA binding protein, humanhuman

TSL 4

Gene TARDBP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-215ENST00000613864 KBTBD13C9JR72 458 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 FLOT1O75955 427 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 TAL1P17542 331 aaPredicted RBP17.35■□□□□ 0.37
TARDBP-215ENST00000613864 CDK8P49336 464 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 EPHB4P54760 987 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 PLS1Q14651 629 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 C12orf60Q5U649 245 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 NCAPG2Q86XI2 1143 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 DNAJC2Q99543 621 aaKnown RBP17.35■□□□□ 0.37
TARDBP-215ENST00000613864 FBXO28Q9NVF7 368 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 PRKAG2Q9UGJ0 569 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 SWAP70Q9UH65 585 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 PHF24Q9UPV7 400 aa17.35■□□□□ 0.37
TARDBP-215ENST00000613864 PGK2P07205 417 aa17.34■□□□□ 0.37
TARDBP-215ENST00000613864 MYH7P12883 1935 aa17.34■□□□□ 0.37
TARDBP-215ENST00000613864 ADD2P35612 726 aa17.34■□□□□ 0.37
TARDBP-215ENST00000613864 TLE2Q04725 743 aa17.34■□□□□ 0.37
TARDBP-215ENST00000613864 ICA1Q05084 483 aa17.34■□□□□ 0.37
TARDBP-215ENST00000613864 ZNF792Q3KQV3 632 aa17.34■□□□□ 0.37
TARDBP-215ENST00000613864 ZNF697Q5TEC3 545 aa17.34■□□□□ 0.37
TARDBP-215ENST00000613864 REPS2Q8NFH8 660 aa17.34■□□□□ 0.37
TARDBP-215ENST00000613864 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.34■□□□□ 0.37
TARDBP-215ENST00000613864 GREB1LQ9C091 1923 aaPredicted RBP17.34■□□□□ 0.37
TARDBP-215ENST00000613864 TTC28Q96AY4 2481 aa17.33■□□□□ 0.37
TARDBP-215ENST00000613864 WDR46O15213 610 aaKnown RBP17.33■□□□□ 0.36
TARDBP-215ENST00000613864 MBD4O95243 580 aa17.33■□□□□ 0.36
TARDBP-215ENST00000613864 ZNF865P0CJ78 1059 aaPredicted RBP17.33■□□□□ 0.36
TARDBP-215ENST00000613864 FCER1AP12319 257 aa17.33■□□□□ 0.36
TARDBP-215ENST00000613864 RIOX2Q8IUF8 465 aa17.33■□□□□ 0.36
TARDBP-215ENST00000613864 PRDM5Q9NQX1 630 aaPredicted RBP17.33■□□□□ 0.36
TARDBP-215ENST00000613864 ATP8A2Q9NTI2 1148 aa17.33■□□□□ 0.36
TARDBP-215ENST00000613864 USP17L12C9JPN9 530 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 USP17L21D6R901 530 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 APBB1O00213 710 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 MYCNP04198 464 aaPredicted RBP17.32■□□□□ 0.36
TARDBP-215ENST00000613864 EEF2P13639 858 aaKnown RBP17.32■□□□□ 0.36
TARDBP-215ENST00000613864 SMAD3P84022 425 aaKnown RBP17.32■□□□□ 0.36
TARDBP-215ENST00000613864 HSP90AB4PQ58FF6 505 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 C16orf86Q6ZW13 317 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 CLASRPQ8N2M8 674 aaKnown RBP17.32■□□□□ 0.36
TARDBP-215ENST00000613864 CCDC17Q96LX7 622 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 TINF2Q9BSI4 451 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 ARHGEF10LQ9HCE6 1279 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 PAG1Q9NWQ8 432 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 SLC5A4Q9NY91 659 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 ZNF214Q9UL59 606 aaPredicted RBP17.32■□□□□ 0.36
TARDBP-215ENST00000613864 CHD9Q3L8U1 2897 aa17.32■□□□□ 0.36
TARDBP-215ENST00000613864 ZBED9Q6R2W3 1325 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 VWA5AO00534 786 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 SLC25A27O95847 323 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 PGK1P00558 417 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 SAMD1Q6SPF0 538 aaPredicted RBP17.31■□□□□ 0.36
TARDBP-215ENST00000613864 MYLIPQ8WY64 445 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 LENG1Q96BZ8 264 aaPredicted RBP17.31■□□□□ 0.36
TARDBP-215ENST00000613864 KIF1BPQ96EK5 621 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 BOLA2Q9H3K6 86 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 XPNPEP3Q9NQH7 507 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 NRBP1Q9UHY1 535 aa17.31■□□□□ 0.36
TARDBP-215ENST00000613864 DIS3Q9Y2L1 958 aaKnown RBP17.31■□□□□ 0.36
TARDBP-215ENST00000613864 KIAA0355O15063 1070 aa17.3■□□□□ 0.36
TARDBP-215ENST00000613864 ATP5JP18859 108 aa17.3■□□□□ 0.36
TARDBP-215ENST00000613864 STAT3P40763 770 aa17.3■□□□□ 0.36
TARDBP-215ENST00000613864 CTR9Q6PD62 1173 aa17.3■□□□□ 0.36
TARDBP-215ENST00000613864 RPAP2Q8IXW5 612 aaPredicted RBP17.3■□□□□ 0.36
TARDBP-215ENST00000613864 MMP19Q99542 508 aa17.3■□□□□ 0.36
TARDBP-215ENST00000613864 ZBTB40Q9NUA8 1239 aa17.3■□□□□ 0.36
TARDBP-215ENST00000613864 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
TARDBP-215ENST00000613864 ROBO3Q96MS0 1386 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 MUC3AQ02505 3323 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 A0A1W2PQ45 241 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-215ENST00000613864 A0A1W2PQY0 241 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 ADAMTS4O75173 837 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 IFIT2P09913 472 aaKnown RBP17.29■□□□□ 0.36
TARDBP-215ENST00000613864 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
TARDBP-215ENST00000613864 CCSAPQ6IQ19 270 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-215ENST00000613864 MAFAQ8NHW3 353 aaPredicted RBP17.29■□□□□ 0.36
TARDBP-215ENST00000613864 HAUS7Q99871 368 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 PUS7LQ9H0K6 701 aaKnown RBP17.29■□□□□ 0.36
TARDBP-215ENST00000613864 KANSL2Q9H9L4 492 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 RIPK3Q9Y572 518 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 TACC3Q9Y6A5 838 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 MCM3APO60318 1980 aa17.29■□□□□ 0.36
TARDBP-215ENST00000613864 SNAI1O95863 264 aaPredicted RBP17.28■□□□□ 0.36
TARDBP-215ENST00000613864 CLTBP09497 229 aa17.28■□□□□ 0.36
TARDBP-215ENST00000613864 RARBP10826 455 aa17.28■□□□□ 0.36
TARDBP-215ENST00000613864 FAAP100Q0VG06 881 aa17.28■□□□□ 0.36
TARDBP-215ENST00000613864 UBE3CQ15386 1083 aa17.28■□□□□ 0.36
TARDBP-215ENST00000613864 FAM83BQ5T0W9 1011 aa17.28■□□□□ 0.36
TARDBP-215ENST00000613864 SH2D4AQ9H788 454 aa17.28■□□□□ 0.36
TARDBP-215ENST00000613864 DNAJC25-GNG10A0A024R161 153 aa17.27■□□□□ 0.36
TARDBP-215ENST00000613864 IRX5P78411 483 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-215ENST00000613864 KLHDC9Q8NEP7 349 aa17.27■□□□□ 0.36
TARDBP-215ENST00000613864 NUP88Q99567 741 aaPredicted RBP17.27■□□□□ 0.36
TARDBP-215ENST00000613864 ADCY6O43306 1168 aa17.26■□□□□ 0.35
TARDBP-215ENST00000613864 RAB11FIP3O75154 756 aa17.26■□□□□ 0.35
TARDBP-215ENST00000613864 KCTD2Q14681 263 aa17.26■□□□□ 0.35
TARDBP-215ENST00000613864 ANKRD33Q7Z3H0 272 aa17.26■□□□□ 0.35
TARDBP-215ENST00000613864 RNF180Q86T96 592 aa17.26■□□□□ 0.35
TARDBP-215ENST00000613864 FGD4Q96M96 766 aa17.26■□□□□ 0.35
TARDBP-215ENST00000613864 TSEN34Q9BSV6 310 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms