RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PLEKHA4Q9H4M7 779 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 RTL9Q8NET4 1388 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 PNPLA7Q6ZV29 1317 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 LOC102724428A0A0B4J2F2 783 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 ERVV-1B6SEH8 477 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 TNNT3P45378 269 aaPredicted RBP15.86■□□□□ 0.13
COL6A1-207ENST00000612273 KLK7P49862 253 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 SIK1P57059 783 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 TMTC3Q6ZXV5 915 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 TRIM47Q96LD4 638 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 GPR101Q96P66 508 aaPredicted RBP15.86■□□□□ 0.13
COL6A1-207ENST00000612273 PANX2Q96RD6 677 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 ANKZF1Q9H8Y5 726 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 ATRNO75882 1429 aa15.86■□□□□ 0.13
COL6A1-207ENST00000612273 USP17L3A6NCW0 530 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 USP17L4A6NCW7 530 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 PRPF3O43395 683 aaKnown RBP15.85■□□□□ 0.13
COL6A1-207ENST00000612273 SCG2P13521 617 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 MECOMQ03112 1051 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 NPY5RQ15761 445 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 USP17L1Q7RTZ2 530 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 CNGA4Q8IV77 575 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 ANKRD20A12PQ8NF67 263 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 SPATA20Q8TB22 786 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 ABHD10Q9NUJ1 306 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 FAM205AQ6ZU69 1335 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 CYP27A1Q02318 531 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 GSPT2Q8IYD1 628 aaKnown RBP15.85■□□□□ 0.13
COL6A1-207ENST00000612273 FAM84BQ96KN1 310 aaPredicted RBP15.85■□□□□ 0.13
COL6A1-207ENST00000612273 ADAM21Q9UKJ8 722 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 TTC26A0AVF1 554 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 RPN1P04843 607 aaKnown RBP15.85■□□□□ 0.13
COL6A1-207ENST00000612273 DNA2P51530 1060 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 CDKAL1Q5VV42 579 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 TXNRD3Q86VQ6 643 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 FERMT2Q96AC1 680 aa15.85■□□□□ 0.13
COL6A1-207ENST00000612273 SAP30BPQ9UHR5 308 aaKnown RBP15.85■□□□□ 0.13
COL6A1-207ENST00000612273 MACROD2A1Z1Q3 448 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 CTAGE15A4D2H0 777 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 CAMTA2O94983 1202 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 CTAGE8P0CG41 777 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 TFAP4Q01664 338 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 CCDC178Q5BJE1 867 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 CTAGE6Q86UF2 777 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 CTAGE4Q8IX94 777 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 CTAGE1Q96RT6 745 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 TMEM60Q9H2L4 133 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 RABEP2Q9H5N1 569 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 C4AP0C0L4 1744 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 C4BP0C0L5 1744 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 CCDC194A0A1B0GVG4 234 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 UBA7P41226 1012 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 NAPGQ99747 312 aaPredicted RBP15.84■□□□□ 0.13
COL6A1-207ENST00000612273 LMTK3Q96Q04 1460 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 NUP188Q5SRE5 1749 aa15.84■□□□□ 0.13
COL6A1-207ENST00000612273 B4DLN1 442 aa15.83■□□□□ 0.13
COL6A1-207ENST00000612273 MYO1BO43795 1136 aa15.83■□□□□ 0.13
COL6A1-207ENST00000612273 NTSR2O95665 410 aa15.83■□□□□ 0.13
COL6A1-207ENST00000612273 TCP11X2Q5H9J9 407 aa15.83■□□□□ 0.13
COL6A1-207ENST00000612273 TYW1BQ6NUM6 668 aa15.83■□□□□ 0.13
COL6A1-207ENST00000612273 CALCOCO1Q9P1Z2 691 aa15.83■□□□□ 0.13
COL6A1-207ENST00000612273 FAN1Q9Y2M0 1017 aa15.83■□□□□ 0.13
COL6A1-207ENST00000612273 DUSP10Q9Y6W6 482 aa15.83■□□□□ 0.13
COL6A1-207ENST00000612273 NKRFO15226 690 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL6A1-207ENST00000612273 MATR3P43243 847 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL6A1-207ENST00000612273 ATP2C1P98194 919 aaPredicted RBP15.83■□□□□ 0.12
COL6A1-207ENST00000612273 TSR1Q2NL82 804 aaKnown RBP15.83■□□□□ 0.12
COL6A1-207ENST00000612273 DCP1AQ9NPI6 582 aaPredicted RBP15.83■□□□□ 0.12
COL6A1-207ENST00000612273 MINPP1Q9UNW1 487 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 PARP1P09874 1014 aaKnown RBP15.83■□□□□ 0.12
COL6A1-207ENST00000612273 IRX5P78411 483 aaPredicted RBP15.83■□□□□ 0.12
COL6A1-207ENST00000612273 PPARDQ03181 441 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 DIXDC1Q155Q3 683 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 CCDC122Q5T0U0 273 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 SH3RF1Q7Z6J0 888 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 KIAA1328Q86T90 577 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 KAT14Q9H8E8 782 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 MKNK2Q9HBH9 465 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 AGPAT5Q9NUQ2 364 aa15.83■□□□□ 0.12
COL6A1-207ENST00000612273 CNTNAP5Q8WYK1 1306 aa15.82■□□□□ 0.12
COL6A1-207ENST00000612273 TRIM21P19474 475 aaKnown RBP15.82■□□□□ 0.12
COL6A1-207ENST00000612273 USP5P45974 858 aa15.82■□□□□ 0.12
COL6A1-207ENST00000612273 GPS2Q13227 327 aa15.82■□□□□ 0.12
COL6A1-207ENST00000612273 DDB1Q16531 1140 aa15.82■□□□□ 0.12
COL6A1-207ENST00000612273 EPN1Q9Y6I3 576 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-207ENST00000612273 ATP2B2Q01814 1243 aa15.82■□□□□ 0.12
COL6A1-207ENST00000612273 RIN2Q8WYP3 895 aaPredicted RBP15.82■□□□□ 0.12
COL6A1-207ENST00000612273 BCL9O00512 1426 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 ZNF185O15231 689 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 CAPN2P17655 700 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 ZSCAN26Q16670 478 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 LETM2Q2VYF4 491 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 FAM182BQ5T319 152 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 CYP26C1Q6V0L0 522 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 DZIP1Q86YF9 867 aaKnown RBP15.81■□□□□ 0.12
COL6A1-207ENST00000612273 CAGE1Q8TC20 777 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 LUC7L2Q9Y383 392 aaKnown RBP15.81■□□□□ 0.12
COL6A1-207ENST00000612273 SPEF2Q9C093 1822 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 FAM170AA1A519 330 aa15.81■□□□□ 0.12
COL6A1-207ENST00000612273 CCDC151A5D8V7 595 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms