RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 FDPSP14324 419 aaKnown RBP9.42□□□□□ -0.9
TARDBP-213ENST00000611963 PDCP20941 246 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 RCAN1P53805 252 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 GUCY1B3Q02153 619 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 TROAPQ12815 778 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 RRP1BQ14684 758 aaKnown RBP9.42□□□□□ -0.9
TARDBP-213ENST00000611963 NTRK3Q16288 839 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 CCDC178Q5BJE1 867 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 COL13A1Q5TAT6 717 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-213ENST00000611963 ANGEL2Q5VTE6 544 aaKnown RBP9.42□□□□□ -0.9
TARDBP-213ENST00000611963 FKBP1CQ5VVH2 108 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 CYP4F22Q6NT55 531 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 CPLX2Q6PUV4 134 aaKnown RBP9.42□□□□□ -0.9
TARDBP-213ENST00000611963 RASGRP2Q7LDG7 609 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 DGKHQ86XP1 1220 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 CMTR1Q8N1G2 835 aaKnown RBP9.42□□□□□ -0.9
TARDBP-213ENST00000611963 FANCBQ8NB91 859 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 ANKS1AQ92625 1134 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 AIFM3Q96NN9 605 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 TMEM47Q9BQJ4 181 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 SLC26A6Q9BXS9 759 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 ZNF408Q9H9D4 720 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 STX8Q9UNK0 236 aa9.42□□□□□ -0.9
TARDBP-213ENST00000611963 POTEMA6NI47 508 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 FOXN1O15353 648 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 CDKL5O76039 1030 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 GDF11O95390 407 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 BAG4O95429 457 aaKnown RBP9.41□□□□□ -0.9
TARDBP-213ENST00000611963 F13A1P00488 732 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 MCM4P33991 863 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 MMP14P50281 582 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 CERKLQ49MI3 558 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-213ENST00000611963 OTUD7BQ6GQQ9 843 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 POTEGQ6S5H5 508 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 FERMT3Q86UX7 667 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 FAM83AQ86UY5 434 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 METTL16Q86W50 562 aaKnown RBP9.41□□□□□ -0.9
TARDBP-213ENST00000611963 FOXP4Q8IVH2 680 aaPredicted RBP9.41□□□□□ -0.9
TARDBP-213ENST00000611963 LRRC47Q8N1G4 583 aaKnown RBP9.41□□□□□ -0.9
TARDBP-213ENST00000611963 CCDC82Q8N4S0 544 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 DCPSQ96C86 337 aaKnown RBP9.41□□□□□ -0.9
TARDBP-213ENST00000611963 CAPNS2Q96L46 248 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.41□□□□□ -0.9
TARDBP-213ENST00000611963 WBP1LQ9NX94 342 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 MTMR4Q9NYA4 1195 aa9.41□□□□□ -0.9
TARDBP-213ENST00000611963 CCDC196A0A1B0GTZ2 297 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 H3BQV1 296 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 FMNL1O95466 1100 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-213ENST00000611963 CALM1P0DP23 149 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 CALM2P0DP24 149 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 CALM3P0DP25 149 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 TOP1P11387 765 aaKnown RBP9.4□□□□□ -0.9
TARDBP-213ENST00000611963 IFNAR1P17181 557 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 GUCY1A2P33402 732 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 NOVP48745 357 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 TNNI2P48788 182 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 JAG1P78504 1218 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 ATP2B2Q01814 1243 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
TARDBP-213ENST00000611963 FUT2Q10981 343 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 RASA3Q14644 834 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 GRM4Q14833 912 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 SEPT2Q15019 361 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 PAXIP1Q6ZW49 1069 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-213ENST00000611963 TMTC3Q6ZXV5 915 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 MIGA2Q7L4E1 593 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 NBPF11Q86T75 865 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 CTCFLQ8NI51 663 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-213ENST00000611963 HHIPL1Q96JK4 782 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 C8orf76Q96K31 380 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 CCDC17Q96LX7 622 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 GBP4Q96PP9 640 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 ALG1Q9BT22 464 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 GJB4Q9NTQ9 266 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 RBM28Q9NW13 759 aaKnown RBP9.4□□□□□ -0.9
TARDBP-213ENST00000611963 KIF3AQ9Y496 699 aa9.4□□□□□ -0.9
TARDBP-213ENST00000611963 CNTNAP5Q8WYK1 1306 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 PITPNM2Q9BZ72 1349 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 STK36Q9NRP7 1315 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 hCG_1642624A0A1W2PR95 340 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 AOC2O75106 756 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 TTLL1O95922 423 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 GH2P01242 217 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 RESTQ13127 1097 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 TNFAIP1Q13829 316 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 ABCB5Q2M3G0 1257 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 MCTP1Q6DN14 999 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 TATDN1Q6P1N9 297 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 CLEC17AQ6ZS10 378 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 SRBD1Q8N5C6 995 aaKnown RBP9.39□□□□□ -0.91
TARDBP-213ENST00000611963 PIBF1Q8WXW3 757 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 CDCA5Q96FF9 252 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 TEPSINQ96N21 525 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 GBA2Q9HCG7 927 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-213ENST00000611963 CLIP2Q9UDT6 1046 aa9.39□□□□□ -0.91
TARDBP-213ENST00000611963 HERC5Q9UII4 1024 aaKnown RBP9.39□□□□□ -0.91
TARDBP-213ENST00000611963 DOCK1Q14185 1865 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms