RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 F5H6K3 240 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 WDR46O15213 610 aaKnown RBP10.35□□□□□ -0.75
SMAD4-217ENST00000611848 NOVP48745 357 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 SP3Q02447 781 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 KLRC3Q07444 240 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 NECTIN1Q15223 517 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 RNF20Q5VTR2 975 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 IQCA1Q86XH1 822 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 TTC14Q96N46 770 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 P2RX7Q99572 595 aaKnown RBP10.35□□□□□ -0.75
SMAD4-217ENST00000611848 RPAP3Q9H6T3 665 aaPredicted RBP10.35□□□□□ -0.75
SMAD4-217ENST00000611848 STX8Q9UNK0 236 aa10.35□□□□□ -0.75
SMAD4-217ENST00000611848 E7EWF7 191 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 KDM4AO75164 1064 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 BCRP11274 1271 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 ARHGEF6Q15052 776 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 KIAA1755Q5JYT7 1200 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 GMCL1P1Q8NEA9 526 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 NCOA7Q8NI08 942 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 ERO1AQ96HE7 468 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 GBP4Q96PP9 640 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 ZSWIM5Q9P217 1185 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 CPA4Q9UI42 421 aa10.34□□□□□ -0.75
SMAD4-217ENST00000611848 DOCK3Q8IZD9 2030 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 SLC27A2O14975 620 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 RAD21O60216 631 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 NMT2O60551 498 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 NDUFB10O96000 172 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 TOP1P11387 765 aaKnown RBP10.33□□□□□ -0.76
SMAD4-217ENST00000611848 PTMSP20962 102 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 NEK4P51957 841 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 HERVK_113P62684 666 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 NUCB2P80303 420 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 CUL4AQ13619 759 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 COG2Q14746 738 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 KIF22Q14807 665 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 FAM110CQ1W6H9 321 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 CREB3L3Q68CJ9 461 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 RALYLQ86SE5 291 aaKnown RBP10.33□□□□□ -0.76
SMAD4-217ENST00000611848 DGKHQ86XP1 1220 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 SPICE1Q8N0Z3 855 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 TANGO6Q9C0B7 1094 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 HOXC10Q9NYD6 342 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 MYPNQ86TC9 1320 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 RLFQ13129 1914 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 TRAK2O60296 914 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 SLFN13Q68D06 897 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 LBX2Q6XYB7 198 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 LRRC47Q8N1G4 583 aaKnown RBP10.33□□□□□ -0.76
SMAD4-217ENST00000611848 ANKRD13CQ8N6S4 541 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 NKX2-3Q8TAU0 364 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 ANKS1AQ92625 1134 aa10.33□□□□□ -0.76
SMAD4-217ENST00000611848 ZSCAN10Q96SZ4 725 aaPredicted RBP10.33□□□□□ -0.76
SMAD4-217ENST00000611848 PARP14Q460N5 1801 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 MGAMO43451 1857 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 FLOT1O75955 427 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 ZKSCAN1P17029 563 aaPredicted RBP10.32□□□□□ -0.76
SMAD4-217ENST00000611848 LACTBP83111 547 aaPredicted RBP10.32□□□□□ -0.76
SMAD4-217ENST00000611848 TSGA10IPQ3SY00 556 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 FAM83BQ5T0W9 1011 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 RCSD1Q6JBY9 416 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 STOX1Q6ZVD7 989 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 CD99L2Q8TCZ2 262 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 GMCL1Q96IK5 515 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 TMX3Q96JJ7 454 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 TMEM47Q9BQJ4 181 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 ZKSCAN3Q9BRR0 538 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 UBAC1Q9BSL1 405 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 MTA3Q9BTC8 594 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 MORF4L1Q9UBU8 362 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 RABGAP1Q9Y3P9 1069 aa10.32□□□□□ -0.76
SMAD4-217ENST00000611848 TNKSO95271 1327 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-217ENST00000611848 GNRH1P01148 92 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 BMP3P12645 472 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 SLC1A4P43007 532 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 KRT32Q14532 448 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 SART3Q15020 963 aaKnown RBP10.31□□□□□ -0.76
SMAD4-217ENST00000611848 CTU1Q7Z7A3 348 aaKnown RBP10.31□□□□□ -0.76
SMAD4-217ENST00000611848 MB21D2Q8IYB1 491 aaPredicted RBP10.31□□□□□ -0.76
SMAD4-217ENST00000611848 MB21D1Q8N884 522 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 GPRC5AQ8NFJ5 357 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 DCAF4Q8WV16 495 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 KCNB2Q92953 911 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 INTS4Q96HW7 963 aaKnown RBP10.31□□□□□ -0.76
SMAD4-217ENST00000611848 FEM1BQ9UK73 627 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 SNX14Q9Y5W7 946 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 TAF6LQ9Y6J9 622 aa10.31□□□□□ -0.76
SMAD4-217ENST00000611848 ERICH2A1L162 156 aa10.3□□□□□ -0.76
SMAD4-217ENST00000611848 PLA2G6O60733 806 aa10.3□□□□□ -0.76
SMAD4-217ENST00000611848 MCM5P33992 734 aa10.3□□□□□ -0.76
SMAD4-217ENST00000611848 ERVK-9P63128 1117 aa10.3□□□□□ -0.76
SMAD4-217ENST00000611848 ERVK-24P63145 666 aa10.3□□□□□ -0.76
SMAD4-217ENST00000611848 PKN2Q16513 984 aaKnown RBP10.3□□□□□ -0.76
SMAD4-217ENST00000611848 SKOR2Q2VWA4 1001 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-217ENST00000611848 COL13A1Q5TAT6 717 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-217ENST00000611848 CYB5R4Q7L1T6 521 aa10.3□□□□□ -0.76
SMAD4-217ENST00000611848 ENAHQ8N8S7 591 aaPredicted RBP10.3□□□□□ -0.76
SMAD4-217ENST00000611848 PRPF38AQ8NAV1 312 aaKnown RBP10.3□□□□□ -0.76
SMAD4-217ENST00000611848 NUP88Q99567 741 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms