RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PLIN4Q96Q06 1357 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 COBLO75128 1261 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 FLOT1O75955 427 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 FGRP09769 529 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 CHMLP26374 656 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 TFAP4Q01664 338 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 COL9A3Q14050 684 aaPredicted RBP10.3□□□□□ -0.76
SNCA-212ENST00000611107 ARHGEF6Q15052 776 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 ALX1Q15699 326 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 CWC27Q6UX04 472 aaKnown RBP10.3□□□□□ -0.76
SNCA-212ENST00000611107 PLEKHH3Q7Z736 793 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 SLAIN1Q8ND83 568 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 TRPV1Q8NER1 839 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 DIS3LQ8TF46 1054 aaKnown RBP10.3□□□□□ -0.76
SNCA-212ENST00000611107 DDRGK1Q96HY6 314 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 RNF208Q9H0X6 261 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 ARHGEF10LQ9HCE6 1279 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 BIN2Q9UBW5 565 aaPredicted RBP10.3□□□□□ -0.76
SNCA-212ENST00000611107 ANAPC4Q9UJX5 808 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 ADAMTS5Q9UNA0 930 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 TAF6LQ9Y6J9 622 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 ZMYM6O95789 1325 aa10.3□□□□□ -0.76
SNCA-212ENST00000611107 ZNF236Q9UL36 1845 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 F5H6K3 240 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 HIP1O00291 1037 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 WDR46O15213 610 aaKnown RBP10.29□□□□□ -0.76
SNCA-212ENST00000611107 RAD21O60216 631 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 GJB1P08034 283 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 ERCC3P19447 782 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 PTPREP23469 700 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 CCND3P30281 292 aaPredicted RBP10.29□□□□□ -0.76
SNCA-212ENST00000611107 GJA8P48165 433 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 SNAP25P60880 206 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 KLRC3Q07444 240 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 CACNB2Q08289 660 aaPredicted RBP10.29□□□□□ -0.76
SNCA-212ENST00000611107 MAP3K21Q5TCX8 1036 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 NBPF11Q86T75 865 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 AMOTL1Q8IY63 956 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 PXYLP1Q8TE99 480 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 MKL1Q969V6 931 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 SPATC1LQ9H0A9 340 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 PAK6Q9NQU5 681 aaPredicted RBP10.29□□□□□ -0.76
SNCA-212ENST00000611107 RIPK3Q9Y572 518 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 NEDD4P46934 1319 aa10.29□□□□□ -0.76
SNCA-212ENST00000611107 VWA5AO00534 786 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 MAPK4P31152 587 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 NOVP48745 357 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 MAP2K5Q13163 448 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 GRB14Q14449 540 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 WDR78Q5VTH9 848 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 RCSD1Q6JBY9 416 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 ZNF444Q8N0Y2 327 aaPredicted RBP10.28□□□□□ -0.76
SNCA-212ENST00000611107 U2AF1L4Q8WU68 220 aaKnown RBP10.28□□□□□ -0.76
SNCA-212ENST00000611107 LPAR1Q92633 364 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 DEFB118Q96PH6 123 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 NUDT12Q9BQG2 462 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 TMEM106CQ9BVX2 250 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 NACAP1Q9BZK3 213 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.28□□□□□ -0.76
SNCA-212ENST00000611107 ZNF214Q9UL59 606 aaPredicted RBP10.28□□□□□ -0.76
SNCA-212ENST00000611107 PPP1R9AQ9ULJ8 1098 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 GTF3C3Q9Y5Q9 886 aa10.28□□□□□ -0.76
SNCA-212ENST00000611107 SGSM2O43147 1006 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 ORC4O43929 436 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 SGPL1O95470 568 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 HMGCRP04035 888 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 CYP2C19P33261 490 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 PTH1RQ03431 593 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 PLS1Q14651 629 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 PRAMEF19Q5SWL8 479 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 HOXC10Q9NYD6 342 aa10.27□□□□□ -0.77
SNCA-212ENST00000611107 DDX49Q9Y6V7 483 aaKnown RBP10.27□□□□□ -0.77
SNCA-212ENST00000611107 SLC15A5A6NIM6 579 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 RANBP6O60518 1105 aaKnown RBP10.26□□□□□ -0.77
SNCA-212ENST00000611107 CDC45O75419 566 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 TTLL1O95922 423 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 PGK2P07205 417 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 TSPY3P0CV98 308 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 TSPY8P0CW00 308 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 XRCC5P13010 732 aaKnown RBP10.26□□□□□ -0.77
SNCA-212ENST00000611107 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
SNCA-212ENST00000611107 MCCP23508 829 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 ADORA2AP29274 412 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 UBXN2AP68543 259 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 PDE4BQ07343 736 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 RRP12Q5JTH9 1297 aaKnown RBP10.26□□□□□ -0.77
SNCA-212ENST00000611107 SLFN13Q68D06 897 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 LHX8Q68G74 356 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 KCTD1Q719H9 257 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 NCAPG2Q86XI2 1143 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 GTF3C2Q8WUA4 911 aaPredicted RBP10.26□□□□□ -0.77
SNCA-212ENST00000611107 FGD4Q96M96 766 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 APBA2Q99767 749 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 ZKSCAN3Q9BRR0 538 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 RAVER2Q9HCJ3 691 aaKnown RBP10.26□□□□□ -0.77
SNCA-212ENST00000611107 GOPCQ9HD26 462 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 MTMR7Q9Y216 660 aa10.26□□□□□ -0.77
SNCA-212ENST00000611107 BAZ2BQ9UIF8 2168 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms