RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 TFAP4Q01664 338 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 IFIT1BQ5T764 474 aaKnown RBP18.12■□□□□ 0.49
RTN1-209ENST00000611068 LRCH2Q5VUJ6 765 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 USP17L1Q7RTZ2 530 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 MRFAP1L1Q96HT8 127 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 MKRN1Q9UHC7 482 aaKnown RBP18.12■□□□□ 0.49
RTN1-209ENST00000611068 DNAI1Q9UI46 699 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 LIFRP42702 1097 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 MAP2K1Q02750 393 aaPredicted RBP18.12■□□□□ 0.49
RTN1-209ENST00000611068 C12orf60Q5U649 245 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 RPAINQ86UA6 219 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 SGMS1Q86VZ5 419 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 CNKSR1Q969H4 720 aa18.12■□□□□ 0.49
RTN1-209ENST00000611068 GPR75-ASB3A0A0A6YYF3 556 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 RHBDL3P58872 404 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 MICALL1Q8N3F8 863 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 TBC1D22AQ8WUA7 517 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 ALG1Q9BT22 464 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 ARPP21Q9UBL0 812 aaPredicted RBP18.11■□□□□ 0.49
RTN1-209ENST00000611068 IARSP41252 1262 aaKnown RBP18.11■□□□□ 0.49
RTN1-209ENST00000611068 KRT85P78386 507 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 R3HDM1Q15032 1099 aaKnown RBP18.11■□□□□ 0.49
RTN1-209ENST00000611068 SEC23AQ15436 765 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 RTN1Q16799 776 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 IQCA1Q86XH1 822 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 EYA3Q99504 573 aa18.11■□□□□ 0.49
RTN1-209ENST00000611068 PSDA5PKW4 1024 aaPredicted RBP18.1■□□□□ 0.49
RTN1-209ENST00000611068 IQCB1Q15051 598 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 NTRK3Q16288 839 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 TADA2BQ86TJ2 420 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 SPATA32Q96LK8 384 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 ZNF277Q9NRM2 450 aaPredicted RBP18.1■□□□□ 0.49
RTN1-209ENST00000611068 CCDC196A0A1B0GTZ2 297 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 RPS6KA5O75582 802 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 MNAT1P51948 309 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 PDE4BQ07343 736 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 TCP10Q12799 353 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 NBPF20Q3BBV1 942 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 C11orf57Q6ZUT1 292 aaPredicted RBP18.1■□□□□ 0.49
RTN1-209ENST00000611068 ILDR1Q86SU0 546 aaPredicted RBP18.1■□□□□ 0.49
RTN1-209ENST00000611068 C7orf43Q8WVR3 580 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 SRRTQ9BXP5 876 aaKnown RBP18.1■□□□□ 0.49
RTN1-209ENST00000611068 ARFGAP3Q9NP61 516 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.1■□□□□ 0.49
RTN1-209ENST00000611068 FLT1P17948 1338 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 FAM205AQ6ZU69 1335 aa18.1■□□□□ 0.49
RTN1-209ENST00000611068 KIF28PB7ZC32 967 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 PPIP5K2O43314 1243 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 SLC3A2P08195 630 aaKnown RBP18.09■□□□□ 0.49
RTN1-209ENST00000611068 PPP4CP60510 307 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 SARM1Q6SZW1 724 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 LRRC31Q6UY01 552 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 RASGRP2Q7LDG7 609 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 DDX4Q9NQI0 724 aaKnown RBP18.09■□□□□ 0.49
RTN1-209ENST00000611068 USP40Q9NVE5 1235 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 BAZ2BQ9UIF8 2168 aaKnown RBP18.09■□□□□ 0.49
RTN1-209ENST00000611068 GOLGA6L19H0YKK7 550 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 N4BP1O75113 896 aaKnown RBP18.09■□□□□ 0.49
RTN1-209ENST00000611068 URI1O94763 535 aaPredicted RBP18.09■□□□□ 0.49
RTN1-209ENST00000611068 HOMER1Q86YM7 354 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 LTBP1Q14766 1721 aa18.09■□□□□ 0.49
RTN1-209ENST00000611068 A0A087WWV3 80 aa18.08■□□□□ 0.49
RTN1-209ENST00000611068 EFCAB8A8MWE9 144 aa18.08■□□□□ 0.49
RTN1-209ENST00000611068 PLEKHA8P1O95397 391 aa18.08■□□□□ 0.49
RTN1-209ENST00000611068 MAP9Q49MG5 647 aa18.08■□□□□ 0.49
RTN1-209ENST00000611068 EFCAB13Q8IY85 973 aa18.08■□□□□ 0.49
RTN1-209ENST00000611068 TTLL6Q8N841 843 aa18.08■□□□□ 0.49
RTN1-209ENST00000611068 PDE11AQ9HCR9 933 aa18.08■□□□□ 0.49
RTN1-209ENST00000611068 KCNJ14Q9UNX9 436 aa18.08■□□□□ 0.49
RTN1-209ENST00000611068 LRRC37AA6NMS7 1700 aa18.08■□□□□ 0.48
RTN1-209ENST00000611068 SEMA3FQ13275 785 aa18.08■□□□□ 0.48
RTN1-209ENST00000611068 RBM43Q6ZSC3 357 aaKnown RBP18.08■□□□□ 0.48
RTN1-209ENST00000611068 ZFPM1Q8IX07 1006 aa18.08■□□□□ 0.48
RTN1-209ENST00000611068 IL17RBQ9NRM6 502 aa18.08■□□□□ 0.48
RTN1-209ENST00000611068 NR1I2O75469 434 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 RAD17O75943 681 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 KCNA3P22001 575 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 SSRP1Q08945 709 aaKnown RBP18.07■□□□□ 0.48
RTN1-209ENST00000611068 NFIAQ12857 509 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 SKIDA1Q1XH10 827 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 SBK1Q52WX2 424 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 AMOTL1Q8IY63 956 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 CLSTN2Q9H4D0 955 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 PPP1R12AO14974 1030 aaPredicted RBP18.07■□□□□ 0.48
RTN1-209ENST00000611068 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 BIRC2Q13490 618 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 GNL2Q13823 731 aaKnown RBP18.07■□□□□ 0.48
RTN1-209ENST00000611068 KCNV1Q6PIU1 500 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 CPLX2Q6PUV4 134 aaKnown RBP18.07■□□□□ 0.48
RTN1-209ENST00000611068 ZNF444Q8N0Y2 327 aaPredicted RBP18.07■□□□□ 0.48
RTN1-209ENST00000611068 LEO1Q8WVC0 666 aaPredicted RBP18.07■□□□□ 0.48
RTN1-209ENST00000611068 USP28Q96RU2 1077 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 PARD6BQ9BYG5 372 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 STX8Q9UNK0 236 aa18.07■□□□□ 0.48
RTN1-209ENST00000611068 FAM196BA6NMK8 535 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 YDJCA8MPS7 323 aa18.06■□□□□ 0.48
RTN1-209ENST00000611068 ETF1P62495 437 aaKnown RBP18.06■□□□□ 0.48
RTN1-209ENST00000611068 CATIPQ7Z7H3 387 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms