RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 PRAMEF13Q5VWM6 474 aa6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 SEC16BQ96JE7 1060 aa6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 TMEM87BQ96K49 555 aa6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 GMLQ99445 158 aa6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 GINM1Q9NU53 330 aa6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 USP35Q9P2H5 1018 aa6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 TMEM59LQ9UK28 342 aa6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 TPX2Q9ULW0 747 aaKnown RBP6.75□□□□□ -1.33
SMCHD1-213ENST00000609587 HPXP02790 462 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 SYN1P17600 705 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 NASPP49321 788 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 ZNF165P49910 485 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 DBX2Q6ZNG2 339 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 MYLIPQ8WY64 445 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 ACSF2Q96CM8 615 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 DRC1Q96MC2 740 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 RNF32Q9H0A6 362 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 BRMS1Q9HCU9 246 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 PPP1R1BQ9UD71 204 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 POLR3KQ9Y2Y1 108 aaPredicted RBP6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 CORINQ9Y5Q5 1042 aa6.74□□□□□ -1.33
SMCHD1-213ENST00000609587 PLCG1P19174 1290 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 ATP2B1P20020 1258 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 TRHRP34981 398 aaPredicted RBP6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 SOX9P48436 509 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 HK2P52789 917 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 NFIXQ14938 502 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 ZNF746Q6NUN9 644 aaPredicted RBP6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 LETMD1Q6P1Q0 360 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 MIPEPQ99797 713 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 MCOLN1Q9GZU1 580 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 RTEL1Q9NZ71 1219 aa6.73□□□□□ -1.33
SMCHD1-213ENST00000609587 GRIN3BO60391 1043 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 TRIM13O60858 407 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 ESR1P03372 595 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 FGRP09769 529 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 GK5Q6ZS86 529 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 MCF2L2Q86YR7 1114 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 REXO1Q8N1G1 1221 aaKnown RBP6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 RIN3Q8TB24 985 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 BAHD1Q8TBE0 780 aaPredicted RBP6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 UBE2FQ969M7 185 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 COX4I2Q96KJ9 171 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 SP110Q9HB58 689 aa6.72□□□□□ -1.33
SMCHD1-213ENST00000609587 MYOCOSA0A1B0GUC4 107 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 HTR3BO95264 441 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 SSBP05455 408 aaKnown RBP eCLIP6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 DLG4P78352 724 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 SLFN12Q8IYM2 578 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 FERD3LQ96RJ6 166 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 ZSWIM5Q9P217 1185 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 REV1Q9UBZ9 1251 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 STRIP2Q9ULQ0 834 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 PPT2Q9UMR5 302 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 PCDHB14Q9Y5E9 798 aa6.71□□□□□ -1.34
SMCHD1-213ENST00000609587 ATE1O95260 518 aa6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 YARSP54577 528 aaKnown RBP6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 NFKB2Q00653 900 aa6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 CLCQ05315 142 aa6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 SKOR2Q2VWA4 1001 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 FBXW10Q5XX13 1052 aa6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 GGNQ86UU5 652 aa6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 XAGE3Q8WTP9 111 aa6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 DPH2Q9BQC3 489 aaPredicted RBP6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 SRRTQ9BXP5 876 aaKnown RBP6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 CEP131Q9UPN4 1083 aa6.7□□□□□ -1.34
SMCHD1-213ENST00000609587 UPK3BL1B0FP48 263 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 UPK3BL2E5RIL1 263 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 IGSF3O75054 1194 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 CBX7O95931 251 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 CYP7A1P22680 504 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 GTF2F1P35269 517 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 CCDC81Q6ZN84 652 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 MARCH10Q8NA82 808 aaPredicted RBP6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 FAM13CQ8NE31 585 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 DNAJB8Q8NHS0 232 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 CYB5D2Q8WUJ1 264 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 ADAMTS10Q9H324 1103 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 EHMT1Q9H9B1 1298 aa6.69□□□□□ -1.34
SMCHD1-213ENST00000609587 SEMA7AO75326 666 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 IMPDH2P12268 514 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 ETV3P41162 512 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 KIR3DL1P43629 444 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 TNK2Q07912 1038 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 MLECQ14165 292 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 TIGD5Q53EQ6 642 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 CDH24Q86UP0 819 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 IRF2BP1Q8IU81 584 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 CXorf38Q8TB03 319 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 PPP1R13LQ8WUF5 828 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 UBXN4Q92575 508 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 DHX38Q92620 1227 aaKnown RBP6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 CRBNQ96SW2 442 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 ZNRF3Q9ULT6 936 aa6.68□□□□□ -1.34
SMCHD1-213ENST00000609587 CHURC1-FNTBB4DL54 471 aa6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 STK10O94804 968 aaKnown RBP6.67□□□□□ -1.34
SMCHD1-213ENST00000609587 EIF6P56537 245 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms