RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 FANCBQ8NB91 859 aa11.21□□□□□ -0.62
CTCFL-222ENST00000609232 BCS1LQ9Y276 419 aa11.21□□□□□ -0.62
CTCFL-222ENST00000609232 EVCP57679 992 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 RESTQ13127 1097 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 PLS1Q14651 629 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 AOC3Q16853 763 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 C15orf52Q6ZUT6 534 aaKnown RBP11.2□□□□□ -0.62
CTCFL-222ENST00000609232 SGMS1Q86VZ5 419 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 CPXCR1Q8N123 301 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 MMRN2Q9H8L6 949 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 SALL1Q9NSC2 1324 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 ZNF710Q8N1W2 664 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 FBXO18Q8NFZ0 1043 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 CDR1P51861 262 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 DPCR1Q3MIW9 517 aa11.2□□□□□ -0.62
CTCFL-222ENST00000609232 ATP1A3P13637 1013 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 CCT6AP40227 531 aaKnown RBP11.19□□□□□ -0.62
CTCFL-222ENST00000609232 PTPROQ16827 1216 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 FBXL16Q8N461 479 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 PLCD4Q9BRC7 762 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-222ENST00000609232 ZNF287Q9HBT7 754 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 ZNF277Q9NRM2 450 aaPredicted RBP11.19□□□□□ -0.62
CTCFL-222ENST00000609232 ANAPC4Q9UJX5 808 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 IRS2Q9Y4H2 1338 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 INF2Q27J81 1249 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 C12orf60Q5U649 245 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 WASF1Q92558 559 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 TEKT1Q969V4 418 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 TDRD3Q9H7E2 651 aaKnown RBP11.19□□□□□ -0.62
CTCFL-222ENST00000609232 IFNKQ9P0W0 207 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 DAGLAQ9Y4D2 1042 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 ZNF202O95125 648 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 STYK1Q6J9G0 422 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
CTCFL-222ENST00000609232 CCDC194A0A1B0GVG4 234 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 ECE2O60344 883 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 NAPAP54920 295 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 TTLL6Q8N841 843 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 MRPS27Q92552 414 aaKnown RBP11.18□□□□□ -0.62
CTCFL-222ENST00000609232 GPR75-ASB3A0A0A6YYF3 556 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 CHMP2AO43633 222 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 MYCNP04198 464 aaPredicted RBP11.18□□□□□ -0.62
CTCFL-222ENST00000609232 ANO1Q5XXA6 986 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 DYMQ7RTS9 669 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 PODNQ7Z5L7 613 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 CERS5Q8N5B7 392 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 KANSL2Q9H9L4 492 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 ARAP2Q8WZ64 1704 aa11.18□□□□□ -0.62
CTCFL-222ENST00000609232 PCP11498 1178 aaKnown RBP11.17□□□□□ -0.62
CTCFL-222ENST00000609232 XBP1P17861 261 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 TXKP42681 527 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 PPP4CP60510 307 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 NAA30Q147X3 362 aaPredicted RBP11.17□□□□□ -0.62
CTCFL-222ENST00000609232 LARGE2Q8N3Y3 721 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 HPS3Q969F9 1004 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 PLEKHA4Q9H4M7 779 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 MYH13Q9UKX3 1938 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 GOLGA6L6A8MZA4 724 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 DDX39AO00148 427 aaKnown RBP11.17□□□□□ -0.62
CTCFL-222ENST00000609232 NFIAQ12857 509 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 SBK1Q52WX2 424 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 PNMA1Q8ND90 353 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 TCHHQ07283 1943 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
CTCFL-222ENST00000609232 AP5Z1O43299 807 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 SERTAD1Q9UHV2 236 aa11.17□□□□□ -0.62
CTCFL-222ENST00000609232 WDHD1O75717 1129 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-222ENST00000609232 PFKFB1P16118 471 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 DPEP1P16444 411 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 IFNAR1P17181 557 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 POLD1P28340 1107 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 EARS2Q5JPH6 523 aaKnown RBP11.16□□□□□ -0.62
CTCFL-222ENST00000609232 SOGA3Q5TF21 947 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 TAF3Q5VWG9 929 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 PYCARDQ9ULZ3 195 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 FLT1P17948 1338 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 FAM205AQ6ZU69 1335 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 ADAMTS3O15072 1205 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 ORC4O43929 436 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 TNNT3P45378 269 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-222ENST00000609232 TMEM87AQ8NBN3 555 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 FAM217BQ9NTX9 383 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-222ENST00000609232 BAZ2AQ9UIF9 1905 aaKnown RBP11.16□□□□□ -0.62
CTCFL-222ENST00000609232 LAMA4Q16363 1823 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 DEXIO95424 95 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 FMNL1O95466 1100 aaPredicted RBP11.16□□□□□ -0.62
CTCFL-222ENST00000609232 CALM1P0DP23 149 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 CALM2P0DP24 149 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 CALM3P0DP25 149 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 CDK8P49336 464 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 SEC23AQ15436 765 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 UBE2SQ16763 222 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 TTBK2Q6IQ55 1244 aa11.16□□□□□ -0.62
CTCFL-222ENST00000609232 ERICH4A6NGS2 130 aa11.15□□□□□ -0.62
CTCFL-222ENST00000609232 KIF5BP33176 963 aa11.15□□□□□ -0.62
CTCFL-222ENST00000609232 CRKP46108 304 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms