RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 ZNF865P0CJ78 1059 aaPredicted RBP18.15■□□□□ 0.5
SSBP4-214ENST00000607020 FAAP100Q0VG06 881 aa18.15■□□□□ 0.5
SSBP4-214ENST00000607020 RIOX2Q8IUF8 465 aa18.15■□□□□ 0.5
SSBP4-214ENST00000607020 USP38Q8NB14 1042 aa18.15■□□□□ 0.5
SSBP4-214ENST00000607020 ZNF576Q9H609 170 aa18.15■□□□□ 0.5
SSBP4-214ENST00000607020 DCP1AQ9NPI6 582 aaPredicted RBP18.15■□□□□ 0.5
SSBP4-214ENST00000607020 PQBP1O60828 265 aaKnown RBP18.14■□□□□ 0.49
SSBP4-214ENST00000607020 ADAMTS4O75173 837 aa18.14■□□□□ 0.49
SSBP4-214ENST00000607020 AKR1A1P14550 325 aa18.14■□□□□ 0.49
SSBP4-214ENST00000607020 EVX2Q03828 476 aa18.14■□□□□ 0.49
SSBP4-214ENST00000607020 MSL3Q8N5Y2 521 aaKnown RBP18.14■□□□□ 0.49
SSBP4-214ENST00000607020 CCDC17Q96LX7 622 aa18.14■□□□□ 0.49
SSBP4-214ENST00000607020 MMP19Q99542 508 aa18.14■□□□□ 0.49
SSBP4-214ENST00000607020 ARHGEF10LQ9HCE6 1279 aa18.14■□□□□ 0.49
SSBP4-214ENST00000607020 DCDC2CA8MYV0 355 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 TIMP1P01033 207 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 PDE6AP16499 860 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 TAL1P17542 331 aaPredicted RBP18.13■□□□□ 0.49
SSBP4-214ENST00000607020 COPB2P35606 906 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 SLC9C2Q5TAH2 1124 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 ZKSCAN2Q63HK3 967 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 KLHDC9Q8NEP7 349 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 NUP133Q8WUM0 1156 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 ATXN2LQ8WWM7 1075 aaKnown RBP18.13■□□□□ 0.49
SSBP4-214ENST00000607020 TIFAQ96CG3 184 aa18.13■□□□□ 0.49
SSBP4-214ENST00000607020 MOXD2PA6NHM9 499 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 COL9A1P20849 921 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 STAT3P40763 770 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 ACLYP53396 1101 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 ICA1Q05084 483 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 KCTD2Q14681 263 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 AKNAD1Q5T1N1 836 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 RASIP1Q5U651 963 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 CCSAPQ6IQ19 270 aaPredicted RBP18.12■□□□□ 0.49
SSBP4-214ENST00000607020 ERC1Q8IUD2 1116 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 SPICE1Q8N0Z3 855 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 SLC44A5Q8NCS7 719 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 TBX21Q9UL17 535 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 CDK5RAP2Q96SN8 1893 aa18.12■□□□□ 0.49
SSBP4-214ENST00000607020 MUC3AQ02505 3323 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 TCRBV5S4A2TA0A5A2 114 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 VWA5AO00534 786 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 PGK2P07205 417 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 AKR1B1P15121 316 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 CDK7P50613 346 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 MFSD5Q6N075 450 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 CCDC174Q6PII3 467 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 REPS2Q8NFH8 660 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.11■□□□□ 0.49
SSBP4-214ENST00000607020 STARD7Q9NQZ5 370 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 ZNF214Q9UL59 606 aaPredicted RBP18.11■□□□□ 0.49
SSBP4-214ENST00000607020 CNPY2Q9Y2B0 182 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 ELP1O95163 1332 aa18.11■□□□□ 0.49
SSBP4-214ENST00000607020 ZNF532Q9HCE3 1301 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 CYP2D6P10635 497 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 MAMDC4Q6UXC1 1216 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 C16orf59Q7L2K0 433 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 AACSQ86V21 672 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 SDR42E1Q8WUS8 393 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 DYNLL2Q96FJ2 89 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.1■□□□□ 0.492e-9■□□□□ 11.2
SSBP4-214ENST00000607020 C1orf115Q9H7X2 142 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 ATP8A2Q9NTI2 1148 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 FAM184BQ9ULE4 1060 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 PPP1R9AQ9ULJ8 1098 aa18.1■□□□□ 0.49
SSBP4-214ENST00000607020 SYNGAP1Q96PV0 1343 aa18.09■□□□□ 0.49
SSBP4-214ENST00000607020 CST5P28325 142 aaPredicted RBP18.09■□□□□ 0.49
SSBP4-214ENST00000607020 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.492e-8■■■■□ 23.2
SSBP4-214ENST00000607020 KCNA10Q16322 511 aa18.09■□□□□ 0.49
SSBP4-214ENST00000607020 TMEM240Q5SV17 173 aa18.09■□□□□ 0.49
SSBP4-214ENST00000607020 LCORLQ8N3X6 602 aa18.09■□□□□ 0.49
SSBP4-214ENST00000607020 KANSL2Q9H9L4 492 aa18.09■□□□□ 0.49
SSBP4-214ENST00000607020 MROH7Q68CQ1 1323 aa18.08■□□□□ 0.49
SSBP4-214ENST00000607020 DUSP11O75319 330 aaKnown RBP18.08■□□□□ 0.48
SSBP4-214ENST00000607020 SNAI1O95863 264 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-214ENST00000607020 CDK8P49336 464 aa18.08■□□□□ 0.48
SSBP4-214ENST00000607020 C12orf60Q5U649 245 aa18.08■□□□□ 0.48
SSBP4-214ENST00000607020 CLEC10AQ8IUN9 316 aa18.08■□□□□ 0.48
SSBP4-214ENST00000607020 ASB2Q96Q27 587 aa18.08■□□□□ 0.48
SSBP4-214ENST00000607020 GAS2L1Q99501 681 aaPredicted RBP18.08■□□□□ 0.48
SSBP4-214ENST00000607020 PBX4Q9BYU1 374 aa18.08■□□□□ 0.48
SSBP4-214ENST00000607020 FBXO28Q9NVF7 368 aa18.08■□□□□ 0.48
SSBP4-214ENST00000607020 A0A0G2JMZ2 1700 aa18.08■□□□□ 0.48
SSBP4-214ENST00000607020 MYH1P12882 1939 aa18.08■□□□□ 0.48
SSBP4-214ENST00000607020 SYNRGQ9UMZ2 1314 aa18.07■□□□□ 0.48
SSBP4-214ENST00000607020 DNAJC25-GNG10A0A024R161 153 aa18.07■□□□□ 0.48
SSBP4-214ENST00000607020 EEF2P13639 858 aaKnown RBP18.07■□□□□ 0.48
SSBP4-214ENST00000607020 HSP90AB4PQ58FF6 505 aa18.07■□□□□ 0.48
SSBP4-214ENST00000607020 CEP85Q6P2H3 762 aa18.07■□□□□ 0.48
SSBP4-214ENST00000607020 C16orf86Q6ZW13 317 aa18.07■□□□□ 0.48
SSBP4-214ENST00000607020 ZNF467Q7Z7K2 595 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-214ENST00000607020 LENG1Q96BZ8 264 aaPredicted RBP18.07■□□□□ 0.48
SSBP4-214ENST00000607020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.06■□□□□ 0.488e-7■■■■□ 26.7
SSBP4-214ENST00000607020 TMEM199Q8N511 208 aa18.06■□□□□ 0.48
SSBP4-214ENST00000607020 PCSK9Q8NBP7 692 aaKnown RBP18.06■□□□□ 0.48
SSBP4-214ENST00000607020 GLT1D1Q96MS3 346 aa18.06■□□□□ 0.48
SSBP4-214ENST00000607020 GOPCQ9HD26 462 aa18.06■□□□□ 0.48
SSBP4-214ENST00000607020 ARVCFO00192 962 aa18.05■□□□□ 0.48
SSBP4-214ENST00000607020 ATP2A1O14983 1001 aa18.05■□□□□ 0.48
SSBP4-214ENST00000607020 PBX2P40425 430 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms