RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 DBNLQ9UJU6 430 aaKnown RBP16.18■□□□□ 0.18
CTSA-212ENST00000606394 MYO9BQ13459 2157 aa16.18■□□□□ 0.18
CTSA-212ENST00000606394 FLOT1O75955 427 aa16.17■□□□□ 0.18
CTSA-212ENST00000606394 POLR3DP05423 398 aaPredicted RBP16.17■□□□□ 0.18
CTSA-212ENST00000606394 TRIM27P14373 513 aa16.17■□□□□ 0.18
CTSA-212ENST00000606394 AKR1A1P14550 325 aa16.17■□□□□ 0.18
CTSA-212ENST00000606394 FAAP100Q0VG06 881 aa16.17■□□□□ 0.18
CTSA-212ENST00000606394 SLC44A5Q8NCS7 719 aa16.17■□□□□ 0.18
CTSA-212ENST00000606394 RIOK1Q9BRS2 568 aaKnown RBP16.17■□□□□ 0.18
CTSA-212ENST00000606394 NOP58Q9Y2X3 529 aaKnown RBP16.17■□□□□ 0.18
CTSA-212ENST00000606394 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
CTSA-212ENST00000606394 MOXD2PA6NHM9 499 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 MPHOSPH10O00566 681 aaKnown RBP16.16■□□□□ 0.18
CTSA-212ENST00000606394 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
CTSA-212ENST00000606394 PGK1P00558 417 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 TIMP1P01033 207 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 COPB2P35606 906 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 MSL3Q8N5Y2 521 aaKnown RBP16.16■□□□□ 0.18
CTSA-212ENST00000606394 ASB2Q96Q27 587 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 ARHGEF10LQ9HCE6 1279 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 SWAP70Q9UH65 585 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 TMX2Q9Y320 296 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 CHD7Q9P2D1 2997 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 MROH7Q68CQ1 1323 aa16.16■□□□□ 0.18
CTSA-212ENST00000606394 WDR46O15213 610 aaKnown RBP16.15■□□□□ 0.18
CTSA-212ENST00000606394 ADAMTS4O75173 837 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 ATP8B2P98198 1209 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 KCTD2Q14681 263 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 MFSD5Q6N075 450 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 ATG4CQ96DT6 458 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 MMP19Q99542 508 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 CRNKL1Q9BZJ0 848 aaKnown RBP16.15■□□□□ 0.18
CTSA-212ENST00000606394 STARD7Q9NQZ5 370 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 THEGQ9P2T0 379 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 TBX21Q9UL17 535 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 ADAMTS5Q9UNA0 930 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 CNPY2Q9Y2B0 182 aa16.15■□□□□ 0.18
CTSA-212ENST00000606394 MAGEB6P1A0A0J9YX57 407 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 ZNF865P0CJ78 1059 aaPredicted RBP16.14■□□□□ 0.17
CTSA-212ENST00000606394 ACLYP53396 1101 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 PPIGQ13427 754 aaKnown RBP eCLIP16.14■□□□□ 0.174e-6■■■■□ 20
CTSA-212ENST00000606394 TMEM132BQ14DG7 1078 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 ZNF792Q3KQV3 632 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 RASIP1Q5U651 963 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 RIOX2Q8IUF8 465 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 VCPKMTQ9H867 229 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 ELP1O95163 1332 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 NAV1Q8NEY1 1877 aa16.14■□□□□ 0.17
CTSA-212ENST00000606394 XIRP2A4UGR9 3374 aa16.13■□□□□ 0.17
CTSA-212ENST00000606394 PLA2G5P39877 138 aa16.13■□□□□ 0.17
CTSA-212ENST00000606394 MRPS5P82675 430 aaKnown RBP16.13■□□□□ 0.17
CTSA-212ENST00000606394 TTF1Q15361 905 aaPredicted RBP16.13■□□□□ 0.17
CTSA-212ENST00000606394 KIAA1755Q5JYT7 1200 aa16.13■□□□□ 0.17
CTSA-212ENST00000606394 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
CTSA-212ENST00000606394 ADAMTS19Q8TE59 1207 aa16.13■□□□□ 0.17
CTSA-212ENST00000606394 EAF2Q96CJ1 260 aaPredicted RBP16.13■□□□□ 0.17
CTSA-212ENST00000606394 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.13■□□□□ 0.173e-10■□□□□ 10.2
CTSA-212ENST00000606394 PBX4Q9BYU1 374 aa16.13■□□□□ 0.17
CTSA-212ENST00000606394 CCDC8Q9H0W5 538 aaPredicted RBP16.13■□□□□ 0.17
CTSA-212ENST00000606394 TLR7Q9NYK1 1049 aaKnown RBP16.13■□□□□ 0.17
CTSA-212ENST00000606394 PARP14Q460N5 1801 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 TRANK1O15050 2925 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 PLXNA1Q9UIW2 1896 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 CST5P28325 142 aaPredicted RBP16.12■□□□□ 0.17
CTSA-212ENST00000606394 ICA1Q05084 483 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 PSRC1Q6PGN9 363 aaPredicted RBP16.12■□□□□ 0.17
CTSA-212ENST00000606394 SIAH1Q8IUQ4 282 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 CCDC17Q96LX7 622 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 GLT1D1Q96MS3 346 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 ANTXR1Q9H6X2 564 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 SYNGAP1Q96PV0 1343 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 SYNRGQ9UMZ2 1314 aa16.12■□□□□ 0.17
CTSA-212ENST00000606394 PGK2P07205 417 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 TAL1P17542 331 aaPredicted RBP16.11■□□□□ 0.17
CTSA-212ENST00000606394 STAT3P40763 770 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 CDK7P50613 346 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 RAB30Q15771 203 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 TMEM240Q5SV17 173 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 CCSAPQ6IQ19 270 aaPredicted RBP16.11■□□□□ 0.17
CTSA-212ENST00000606394 CCDC129Q6ZRS4 1044 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 TMEM199Q8N511 208 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 IL27Q8NEV9 243 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
CTSA-212ENST00000606394 DCP1AQ9NPI6 582 aaPredicted RBP16.11■□□□□ 0.17
CTSA-212ENST00000606394 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
CTSA-212ENST00000606394 VWA5AO00534 786 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 DUSP11O75319 330 aaKnown RBP16.1■□□□□ 0.17
CTSA-212ENST00000606394 BCAR3O75815 825 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 KCNA10Q16322 511 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 SLC9C2Q5TAH2 1124 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 MAMDC4Q6UXC1 1216 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 C16orf59Q7L2K0 433 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 PCSK9Q8NBP7 692 aaKnown RBP16.1■□□□□ 0.17
CTSA-212ENST00000606394 FRAT1Q92837 279 aaPredicted RBP16.1■□□□□ 0.17
CTSA-212ENST00000606394 CCDC136Q96JN2 1154 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 PRDM12Q9H4Q4 367 aa16.1■□□□□ 0.17
CTSA-212ENST00000606394 ZNF214Q9UL59 606 aaPredicted RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms