RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 TMEM40Q8WWA1 233 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 NCAPGQ9BPX3 1015 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 GSX1Q9H4S2 264 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 PICK1Q9NRD5 415 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 PSD3Q9NYI0 1048 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 VAV3Q9UKW4 847 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 TRAK1Q9UPV9 953 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 HDAC5Q9UQL6 1122 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 V9GYY5 206 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 IQGAP1P46940 1657 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 ADCY10Q96PN6 1610 aa4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 RNF17Q9BXT8 1623 aaKnown RBP4.83□□□□□ -1.64
HMGB1P50-201ENST00000605814 CFAP74Q9C0B2 1584 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 PLA2R1Q13018 1463 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 NUP155O75694 1391 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 TMEM265A0A087WTH1 108 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 LRRC10BA6NIK2 292 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 TMEM88BA6NKF7 163 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 NEMFO60524 1076 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 CDC45O75419 566 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 CEACAM5P06731 702 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 RNASE1P07998 156 aaKnown RBP4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 HCLS1P14317 486 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 MX1P20591 662 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 ITPKAP23677 461 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 CCDC183Q5T5S1 534 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 ICE2Q659A1 982 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 SEZ6L2Q6UXD5 910 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 ATF7IPQ6VMQ6 1270 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 DTHD1Q6ZMT9 781 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 TXLNBQ8N3L3 684 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 ARHGAP45Q92619 1136 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 KCNB2Q92953 911 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 FANCD2OSQ96PS1 177 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 SLC26A8Q96RN1 970 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 FUCA2Q9BTY2 467 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 UBXN6Q9BZV1 441 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 CRIM1Q9NZV1 1036 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 PCOLCE2Q9UKZ9 415 aa4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P50-201ENST00000605814 MYOM2P54296 1465 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 IQSEC2Q5JU85 1478 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 KIF24Q5T7B8 1368 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 KIAA1210Q9ULL0 1709 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 SYNGAP1Q96PV0 1343 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 KIF2AO00139 706 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 DHX16O60231 1041 aaKnown RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 GSTP1P09211 210 aaKnown RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 CD96P40200 585 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 GSCP56915 257 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 RBM6P78332 1123 aaKnown RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 PTPN12Q05209 780 aaKnown RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 ORC1Q13415 861 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 IKZF1Q13422 519 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 TTLL4Q14679 1199 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 KCNMB1Q16558 191 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 ALDH1L2Q3SY69 923 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 TEX35Q5T0J7 233 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 LRRN4CLQ8ND94 238 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 JARID2Q92833 1246 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 ACSBG1Q96GR2 724 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 ERO1AQ96HE7 468 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 MYCBPQ99417 103 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 CCDC86Q9H6F5 360 aaKnown RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 TTC12Q9H892 705 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 IQGAP2Q13576 1575 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 LAMC3Q9Y6N6 1575 aa4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 GPATCH8Q9UKJ3 1502 aaKnown RBP4.81□□□□□ -1.64
HMGB1P50-201ENST00000605814 NOS1P29475 1434 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 PDS5BQ9NTI5 1447 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 PIK3R4Q99570 1358 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 SHPRHQ149N8 1683 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 ARID1BQ8NFD5 2236 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 ARHGEF5Q12774 1597 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 TMEM238LA0A1B0GVL6 79 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 HTATSF1O43719 755 aaKnown RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 KIF1CO43896 1103 aaKnown RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 IGSF3O75054 1194 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 RPS6KA5O75582 802 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 CAVIN2O95810 425 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 H2AFXP16104 143 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 CASQ1P31415 396 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 TPM4P67936 248 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 RPS26P11Q5JNZ5 115 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 ZSWIM9Q86XI8 627 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 SUGP1Q8IWZ8 645 aaKnown RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 CCDC82Q8N4S0 544 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 MSL3Q8N5Y2 521 aaKnown RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 TOP6BLQ8N6T0 577 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 GLIS3Q8NEA6 775 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 CCDC112Q8NEF3 446 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 FAM84AQ96KN4 292 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 PUS7Q96PZ0 661 aaKnown RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 NOL10Q9BSC4 688 aaKnown RBP4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 MKNK2Q9HBH9 465 aa4.8□□□□□ -1.64
HMGB1P50-201ENST00000605814 SMC4Q9NTJ3 1288 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms