RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 GOLGA6L4A6NEF3 574 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CYTH3O43739 400 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 PPP6R2O75170 966 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 EEF2P13639 858 aaKnown RBP14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CAP2P40123 477 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ZNF445P59923 1031 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ANO1Q5XXA6 986 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 OTUD7BQ6GQQ9 843 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 FAM173BQ6P4H8 233 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ILDR2Q71H61 639 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CMTR1Q8N1G2 835 aaKnown RBP14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CCDC82Q8N4S0 544 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 LINC00301Q8NCQ3 95 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 TNFRSF25Q93038 417 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 L3MBTL3Q96JM7 780 aaPredicted RBP14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 TMEM39BQ9GZU3 492 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GLT8D2Q9H1C3 349 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GDPD2Q9HCC8 539 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ZBTB21Q9ULJ3 1066 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CEP131Q9UPN4 1083 aa14.14□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 USP17L5A8MUK1 530 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 PLA2G6O60733 806 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 PPFIA3O75145 1194 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GH2P01242 217 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 FOSBP53539 338 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 TRAF1Q13077 416 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SEPT2Q15019 361 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 NPY5RQ15761 445 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 USP17L2Q6R6M4 530 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 BTNL9Q6UXG8 535 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SIAH1Q8IUQ4 282 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 LRRC47Q8N1G4 583 aaKnown RBP14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CHAMP1Q96JM3 812 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ZMYND12Q9H0C1 365 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GOPCQ9HD26 462 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 VPS54Q9P1Q0 977 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 HACL1Q9UJ83 578 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 NOL7Q9UMY1 257 aaKnown RBP14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 TMX2Q9Y320 296 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 OTOFQ9HC10 1997 aa14.13□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 PTPRFP10586 1907 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 FAM196BA6NMK8 535 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 BTBD18B2RXH4 712 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 STXBP3O00186 592 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GRIN3BO60391 1043 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CTNND1O60716 968 aaKnown RBP14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 YBX3P16989 372 aaKnown RBP eCLIP14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 LMOD1P29536 600 aaPredicted RBP14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GNA11P29992 359 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SLC35G1Q2M3R5 365 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CCDC183Q5T5S1 534 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ADALQ6DHV7 355 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SAMD7Q7Z3H4 446 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 BICD2Q8TD16 824 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GJB4Q9NTQ9 266 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 DDX19AQ9NUU7 478 aaKnown RBP14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 RNF181Q9P0P0 153 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 TFIP11Q9UBB9 837 aaKnown RBP14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 KCNJ14Q9UNX9 436 aa14.12□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 PNMA6FA0A0J9YX94 578 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SHTN1A0MZ66 631 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 PHF20L1A8MW92 1017 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 UBE2Q2LH0YL09 131 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 M0R2N6 131 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SPTLC2O15270 562 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GADD45BO75293 160 aaPredicted RBP14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 GDF11O95390 407 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 EGFRP00533 1210 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SLC1A4P43007 532 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 NLRP5P59047 1200 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ORC2Q13416 577 aaPredicted RBP14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 STK38Q15208 465 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 TBC1D10BQ4KMP7 808 aaPredicted RBP14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SLFN13Q68D06 897 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 WWC2Q6AWC2 1192 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CAVIN1Q6NZI2 390 aaKnown RBP14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 BLIDQ8IZY5 108 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 SHISA4Q96DD7 197 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 DEFB129Q9H1M3 183 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ZNF112Q9UJU3 913 aa14.11□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 MYH7BA7E2Y1 1941 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 F5H6K3 240 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ZBTB5O15062 677 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 KLRC3Q07444 240 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 PTPAQ15257 358 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 CCDC96Q2M329 555 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ZSCAN23Q3MJ62 389 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 MCTP2Q6DN12 878 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 DPY19L2Q6NUT2 758 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 ZNF341Q9BYN7 854 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 C6orf50Q9HD87 102 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 TMEM63CQ9P1W3 806 aa14.1□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 FAM237AA0A1B0GTK4 181 aa14.09□□□□□ -0.15
NEDD8-MDP1-203ENST00000604306 NDUFB10O96000 172 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms