RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 CACNB2Q08289 660 aaPredicted RBP21.55■■□□□ 1.04
CCDC12-208ENST00000603885 ANKLE1Q8NAG6 615 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 MROH8Q9H579 483 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 FBXO28Q9NVF7 368 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 CLIP2Q9UDT6 1046 aa21.55■■□□□ 1.04
CCDC12-208ENST00000603885 PLIN4Q96Q06 1357 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 F5H6K3 240 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 FOXP2O15409 715 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 TSPY3P0CV98 308 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 TSPY8P0CW00 308 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 KLRC3Q07444 240 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 MFSD14CQ5VZR4 134 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 NCAPG2Q86XI2 1143 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 CEP95Q96GE4 821 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 MTMR4Q9NYA4 1195 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 PPP1R9AQ9ULJ8 1098 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 ADAMTS5Q9UNA0 930 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 ZNF236Q9UL36 1845 aa21.54■■□□□ 1.04
CCDC12-208ENST00000603885 TTLL1O95922 423 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 NDUFB10O96000 172 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 ADORA2AP29274 412 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 TMEM132BQ14DG7 1078 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 MCMDC2Q4G0Z9 681 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 VPS53Q5VIR6 699 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 DPP9Q86TI2 863 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 NEDD1Q8NHV4 660 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 SYNPO2Q9UMS6 1093 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 MYH4Q9Y623 1939 aa21.53■■□□□ 1.04
CCDC12-208ENST00000603885 A0A0D9SFI3 127 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 VWA5AO00534 786 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 SLC25A27O95847 323 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 TFAP4Q01664 338 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 NECAB2Q7Z6G3 386 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 NPLOC4Q8TAT6 608 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 MKL1Q969V6 931 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 RILPL2Q969X0 211 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 PAWRQ96IZ0 340 aaKnown RBP21.52■■□□□ 1.04
CCDC12-208ENST00000603885 FAM227BQ96M60 508 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 NUP88Q99567 741 aaPredicted RBP21.52■■□□□ 1.04
CCDC12-208ENST00000603885 FLRT1Q9NZU1 646 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 OGDHLQ9ULD0 1010 aa21.52■■□□□ 1.04
CCDC12-208ENST00000603885 COL11A1P12107 1806 aaPredicted RBP21.51■■□□□ 1.03
CCDC12-208ENST00000603885 H0YGN5 161 aa21.51■■□□□ 1.03
CCDC12-208ENST00000603885 CCND3P30281 292 aaPredicted RBP21.51■■□□□ 1.03
CCDC12-208ENST00000603885 FAM47AQ5JRC9 791 aa21.51■■□□□ 1.03
CCDC12-208ENST00000603885 PLEKHM2Q8IWE5 1019 aa21.51■■□□□ 1.03
CCDC12-208ENST00000603885 ABRAQ8N0Z2 381 aa21.51■■□□□ 1.03
CCDC12-208ENST00000603885 SLF1Q9BQI6 1058 aa21.51■■□□□ 1.03
CCDC12-208ENST00000603885 OSBPL3Q9H4L5 887 aa21.51■■□□□ 1.03
CCDC12-208ENST00000603885 SLC5A4Q9NY91 659 aa21.51■■□□□ 1.03
CCDC12-208ENST00000603885 CTDSPL2Q05D32 466 aa21.5■■□□□ 1.03
CCDC12-208ENST00000603885 NMIQ13287 307 aaPredicted RBP21.5■■□□□ 1.03
CCDC12-208ENST00000603885 ALX1Q15699 326 aa21.5■■□□□ 1.03
CCDC12-208ENST00000603885 PPP4R3BQ5MIZ7 849 aa21.5■■□□□ 1.03
CCDC12-208ENST00000603885 RIOX2Q8IUF8 465 aa21.5■■□□□ 1.03
CCDC12-208ENST00000603885 LRRC47Q8N1G4 583 aaKnown RBP21.5■■□□□ 1.03
CCDC12-208ENST00000603885 DIS3LQ8TF46 1054 aaKnown RBP21.5■■□□□ 1.03
CCDC12-208ENST00000603885 ANAPC4Q9UJX5 808 aa21.5■■□□□ 1.03
CCDC12-208ENST00000603885 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.5■■□□□ 1.03
CCDC12-208ENST00000603885 NR2E3Q9Y5X4 410 aa21.5■■□□□ 1.03
CCDC12-208ENST00000603885 FCER1AP12319 257 aa21.49■■□□□ 1.03
CCDC12-208ENST00000603885 COPB2P35606 906 aa21.49■■□□□ 1.03
CCDC12-208ENST00000603885 STAT3P40763 770 aa21.49■■□□□ 1.03
CCDC12-208ENST00000603885 OLFML2BQ68BL8 750 aa21.49■■□□□ 1.03
CCDC12-208ENST00000603885 PRPF38AQ8NAV1 312 aaKnown RBP21.49■■□□□ 1.03
CCDC12-208ENST00000603885 GMCL1P1Q8NEA9 526 aa21.49■■□□□ 1.03
CCDC12-208ENST00000603885 NBPF3Q9H094 633 aa21.49■■□□□ 1.03
CCDC12-208ENST00000603885 ZNF214Q9UL59 606 aaPredicted RBP21.49■■□□□ 1.03
CCDC12-208ENST00000603885 TSPY2A6NKD2 308 aa21.48■■□□□ 1.03
CCDC12-208ENST00000603885 SLC34A2O95436 690 aa21.48■■□□□ 1.03
CCDC12-208ENST00000603885 CYP2C19P33261 490 aa21.48■■□□□ 1.03
CCDC12-208ENST00000603885 REPS2Q8NFH8 660 aa21.48■■□□□ 1.03
CCDC12-208ENST00000603885 CCDC171Q6TFL3 1326 aa21.48■■□□□ 1.03
CCDC12-208ENST00000603885 EVI5O60447 810 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 COBLO75128 1261 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 FGAP02671 866 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 HSPD1P10809 573 aaKnown RBP21.47■■□□□ 1.03
CCDC12-208ENST00000603885 SDSP20132 328 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 MFAP1P55081 439 aaKnown RBP21.47■■□□□ 1.03
CCDC12-208ENST00000603885 SLFN13Q68D06 897 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 LHX8Q68G74 356 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 ZNF589Q86UQ0 364 aaPredicted RBP21.47■■□□□ 1.03
CCDC12-208ENST00000603885 MMP19Q99542 508 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 TEX13BQ9BXU2 312 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 FEM1BQ9UK73 627 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 CTDP1Q9Y5B0 961 aaPredicted RBP21.47■■□□□ 1.03
CCDC12-208ENST00000603885 ZMYM6O95789 1325 aa21.47■■□□□ 1.03
CCDC12-208ENST00000603885 ORC4O43929 436 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 RANBP6O60518 1105 aaKnown RBP21.46■■□□□ 1.03
CCDC12-208ENST00000603885 MSCO60682 206 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 IGHA2P01877 340 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 CNGA1P29973 690 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 MNX1P50219 401 aaPredicted RBP21.46■■□□□ 1.03
CCDC12-208ENST00000603885 KCTD2Q14681 263 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 KIFC2Q96AC6 838 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 C11orf49Q9H6J7 331 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 INCENPQ9NQS7 918 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 STX8Q9UNK0 236 aa21.46■■□□□ 1.03
CCDC12-208ENST00000603885 ZBED4O75132 1171 aa21.45■■□□□ 1.02
CCDC12-208ENST00000603885 BMP3P12645 472 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms