RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 TEPSINQ96N21 525 aa14.68□□□□□ -0.06
HERPUD2-207ENST00000603731 ARHGEF10LQ9HCE6 1279 aa14.68□□□□□ -0.06
HERPUD2-207ENST00000603731 RBM27Q9P2N5 1060 aaKnown RBP14.68□□□□□ -0.06
HERPUD2-207ENST00000603731 RAD21O60216 631 aa14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 PTMSP20962 102 aa14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 CAP2P40123 477 aa14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 MAP3K10Q02779 954 aa14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 ASPRV1Q53RT3 343 aa14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 FERMT3Q86UX7 667 aa14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 SRBD1Q8N5C6 995 aaKnown RBP14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 ZSCAN16Q9H4T2 348 aaPredicted RBP14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 MAD2L2Q9UI95 211 aa14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 ZBTB21Q9ULJ3 1066 aa14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 ISY1Q9ULR0 285 aaKnown RBP14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 V9GY48 417 aaPredicted RBP14.67□□□□□ -0.06
HERPUD2-207ENST00000603731 CNTNAP5Q8WYK1 1306 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 PALM3A6NDB9 673 aaPredicted RBP14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 KLRF2D3W0D1 207 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 PDHBP11177 359 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 GUCY1A2P33402 732 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 EPHX2P34913 555 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 ECE1P42892 770 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 RRP1BQ14684 758 aaKnown RBP14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 CCDC96Q2M329 555 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 SHROOM1Q2M3G4 852 aaPredicted RBP14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 FOXD4L6Q3SYB3 417 aaPredicted RBP14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 SUPT20HL1Q3ZLR7 823 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 NBPF12Q5TAG4 269 aaPredicted RBP14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 USP17L2Q6R6M4 530 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 FOXD4L3Q6VB84 417 aaPredicted RBP14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 USP50Q70EL3 339 aaPredicted RBP14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 SULF1Q8IWU6 871 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 STAG2Q8N3U4 1231 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 FBXO18Q8NFZ0 1043 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 MKL1Q969V6 931 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 ZNF341Q9BYN7 854 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 GINM1Q9NU53 330 aa14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 BAZ2BQ9UIF8 2168 aaKnown RBP14.66□□□□□ -0.06
HERPUD2-207ENST00000603731 USP17L5A8MUK1 530 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 AOC2O75106 756 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 ASNSP08243 561 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 GOLGA8HP0CJ92 632 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 SMARCA1P28370 1054 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 FUT2Q10981 343 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 GNL2Q13823 731 aaKnown RBP14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 SAFBQ15424 915 aaKnown RBP eCLIP14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 SLFN13Q68D06 897 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 KRT40Q6A162 431 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 DCAF4Q8WV16 495 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 AIFM3Q96NN9 605 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 DOCK1Q14185 1865 aa14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 FRMPD2Q68DX3 1309 aaPredicted RBP14.65□□□□□ -0.06
HERPUD2-207ENST00000603731 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 JAG1P78504 1218 aa14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 FMR1Q06787 632 aaKnown RBP eCLIP14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 RESTQ13127 1097 aa14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 GPATCH4Q5T3I0 446 aaKnown RBP14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 OTUD7BQ6GQQ9 843 aa14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 USP48Q86UV5 1035 aa14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 PIBF1Q8WXW3 757 aa14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 SPZ1Q9BXG8 430 aa14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 GPCPD1Q9NPB8 672 aa14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 SYNPO2Q9UMS6 1093 aa14.64□□□□□ -0.07
HERPUD2-207ENST00000603731 hCG_1642624A0A1W2PR95 340 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 CTNND1O60716 968 aaKnown RBP14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 SNHG28P0DPA3 235 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 SCG2P13521 617 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 SLC1A4P43007 532 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 ZNF543Q08ER8 600 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 CSPP1Q1MSJ5 1256 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 PRAMEF18Q5VWM3 479 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 GMCL1P1Q8NEA9 526 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 ZC3H15Q8WU90 426 aaKnown RBP14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 RRP36Q96EU6 259 aaKnown RBP14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 GOPCQ9HD26 462 aa14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 SEC63Q9UGP8 760 aaKnown RBP14.63□□□□□ -0.07
HERPUD2-207ENST00000603731 PHF20L1A8MW92 1017 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 F5H6K3 240 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 UBE2Q2LH0YL09 131 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 KRT85P78386 507 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 KLRC3Q07444 240 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 PKN1Q16512 942 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 PFKFB3Q16875 520 aaPredicted RBP14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 RASGRP2Q7LDG7 609 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 BRAPQ7Z569 592 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 ZNF396Q96N95 335 aaPredicted RBP14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 VAT1LQ9HCJ6 419 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 BRMS1Q9HCU9 246 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 GJB4Q9NTQ9 266 aa14.62□□□□□ -0.07
HERPUD2-207ENST00000603731 TRPM7Q96QT4 1865 aa14.61□□□□□ -0.07
HERPUD2-207ENST00000603731 CA12O43570 354 aa14.61□□□□□ -0.07
HERPUD2-207ENST00000603731 NF2P35240 595 aa14.61□□□□□ -0.07
HERPUD2-207ENST00000603731 MAP2K2P36507 400 aa14.61□□□□□ -0.07
HERPUD2-207ENST00000603731 DNM1Q05193 864 aaKnown RBP14.61□□□□□ -0.07
HERPUD2-207ENST00000603731 KCTD1Q719H9 257 aa14.61□□□□□ -0.07
HERPUD2-207ENST00000603731 KRT26Q7Z3Y9 468 aa14.61□□□□□ -0.07
HERPUD2-207ENST00000603731 PNMA8AQ86V59 439 aaPredicted RBP14.61□□□□□ -0.07
HERPUD2-207ENST00000603731 FEZ1Q99689 392 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms