RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 DDX39AO00148 427 aaKnown RBP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 MYCLP12524 364 aaPredicted RBP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 ABCB4P21439 1286 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 PHEXP78562 749 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 GRIN2AQ12879 1464 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 NR1I2O75469 434 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 MUM1L1Q5H9M0 696 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 TMOD4Q9NZQ9 345 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 ARHGAP44Q17R89 818 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 MYL10Q9BUA6 226 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 ZNF215Q9UL58 517 aaPredicted RBP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 IL2RBP14784 551 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 TNNI1P19237 187 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 INPP1P49441 399 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 NONOQ15233 471 aaKnown RBP eCLIP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 MTHFSDQ2M296 383 aaKnown RBP10.55□□□□□ -0.72
CSMD1-217ENST00000602723 OTUD7BQ6GQQ9 843 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 APPBP2Q92624 585 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 NLRC4Q9NPP4 1024 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 RAB20Q9NX57 234 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 USH1GQ495M9 461 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 FAM173BQ6P4H8 233 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 RPAINQ86UA6 219 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 KSR1Q8IVT5 923 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 EPS15L1Q9UBC2 864 aa10.55□□□□□ -0.72
CSMD1-217ENST00000602723 LRRD1A4D1F6 860 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 SART1O43290 800 aaKnown RBP10.54□□□□□ -0.72
CSMD1-217ENST00000602723 PPP2R5BQ15173 497 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 DYMQ7RTS9 669 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 TSC1Q92574 1164 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 RIOK1Q9BRS2 568 aaKnown RBP10.54□□□□□ -0.72
CSMD1-217ENST00000602723 ORC6Q9Y5N6 252 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 PASKQ96RG2 1323 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 FAM170AA1A519 330 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 STAT1P42224 750 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 NELFCDQ8IXH7 590 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 UIMC1Q96RL1 719 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 RIMBP2O15034 1052 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 CYP2J2P51589 502 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 JDP2Q8WYK2 163 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 ATF2P15336 505 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 VPS41P49754 854 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 BCAS4Q8TDM0 211 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 KCNJ14Q9UNX9 436 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 JAK2O60674 1132 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 SEPT10Q9P0V9 454 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 DENND4BO75064 1496 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-217ENST00000602723 MMEL1Q495T6 779 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 DRC3Q9H069 523 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 NT5C3AQ9H0P0 336 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 MX2P20592 715 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 PHACTR3Q96KR7 559 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 AATFQ9NY61 560 aaKnown RBP eCLIP10.54□□□□□ -0.72
CSMD1-217ENST00000602723 PCDH11XQ9BZA7 1347 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 PCDH11YQ9BZA8 1340 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 SSH2Q76I76 1423 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 UFL1O94874 794 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 BRDTQ58F21 947 aaPredicted RBP10.54□□□□□ -0.72
CSMD1-217ENST00000602723 CCDC197Q8NCU1 140 aa10.54□□□□□ -0.72
CSMD1-217ENST00000602723 CCT5P48643 541 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 HSP90AA5PQ58FG0 334 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 XAGE2Q96GT9 111 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 PRPF6O94906 941 aaKnown RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 IFT88Q13099 833 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 ANKFY1Q9P2R3 1169 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 CTDSPL2Q05D32 466 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 RBM17Q96I25 401 aaKnown RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 TMEM63CQ9P1W3 806 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 ZNF500O60304 480 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 PRDM1O75626 825 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 ITGA6P23229 1130 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 LRMPQ12912 555 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 hCG_1642624A0A1W2PR95 340 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 PTPROQ16827 1216 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 KRT24Q2M2I5 525 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 GPBP1Q86WP2 473 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 MORC4Q8TE76 937 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 N4BP1O75113 896 aaKnown RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 PFKFB1P16118 471 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 RASIP1Q5U651 963 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 ADAT2Q7Z6V5 191 aaKnown RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 POMGNT1Q8WZA1 660 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 SPATS2LQ9NUQ6 558 aaKnown RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 CABP7Q86V35 215 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 TPH2Q8IWU9 490 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 LRRC8CQ8TDW0 803 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 RABGGTAQ92696 567 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 AZI2Q9H6S1 392 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 VPS54Q9P1Q0 977 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 NOD1Q9Y239 953 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 GAS7O60861 476 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 RBM26Q5T8P6 1007 aaKnown RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 TTC19Q6DKK2 380 aaPredicted RBP10.53□□□□□ -0.72
CSMD1-217ENST00000602723 CNBD1Q8NA66 436 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 CLEC11AQ9Y240 323 aa10.53□□□□□ -0.72
CSMD1-217ENST00000602723 EYA2O00167 538 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms