RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PRKG1Q13976 671 aa20.08■□□□□ 0.8
PPFIA3-207ENST00000602716 KIAA1755Q5JYT7 1200 aa20.08■□□□□ 0.8
PPFIA3-207ENST00000602716 IFFO2Q5TF58 517 aa20.08■□□□□ 0.8
PPFIA3-207ENST00000602716 USP50Q70EL3 339 aaPredicted RBP20.08■□□□□ 0.8
PPFIA3-207ENST00000602716 MKL1Q969V6 931 aa20.08■□□□□ 0.8
PPFIA3-207ENST00000602716 NUP88Q99567 741 aaPredicted RBP20.08■□□□□ 0.8
PPFIA3-207ENST00000602716 KLRF2D3W0D1 207 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 RAD21O60216 631 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 TTBK2Q6IQ55 1244 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 TRIM22Q8IYM9 498 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 UBA5Q9GZZ9 404 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 GPCPD1Q9NPB8 672 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 ZNF543Q08ER8 600 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 KCTD1Q719H9 257 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 FBXO18Q8NFZ0 1043 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 DCPSQ96C86 337 aaKnown RBP20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 KIF3AQ9Y496 699 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 PPP2R3BQ9Y5P8 575 aa20.07■□□□□ 0.8
PPFIA3-207ENST00000602716 ATAD5Q96QE3 1844 aa20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 PRPF3O43395 683 aaKnown RBP20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 DEXIO95424 95 aa20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 NDUFB10O96000 172 aa20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 KRT40Q6A162 431 aa20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 KRT26Q7Z3Y9 468 aa20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 WRNIP1Q96S55 665 aa20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 POLR2AP24928 1970 aaKnown RBP20.06■□□□□ 0.8
PPFIA3-207ENST00000602716 SCN4AP35499 1836 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 ZYXQ15942 572 aaKnown RBP20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 CCDC96Q2M329 555 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 SULF1Q8IWU6 871 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 SPICE1Q8N0Z3 855 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 ZKSCAN4Q969J2 545 aaPredicted RBP20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 ZNF341Q9BYN7 854 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 VPS54Q9P1Q0 977 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 KCNJ14Q9UNX9 436 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 DGKZQ13574 1117 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 SLFN13Q68D06 897 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 USP48Q86UV5 1035 aa20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 RBM27Q9P2N5 1060 aaKnown RBP20.05■□□□□ 0.8
PPFIA3-207ENST00000602716 F5H6K3 240 aa20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 SLC16A2P36021 539 aa20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 KLRC3Q07444 240 aa20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 DCAF15Q66K64 600 aa20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 ANP32BQ92688 251 aaKnown RBP20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 GPKOWQ92917 476 aaPredicted RBP eCLIP20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 GDPD2Q9HCC8 539 aa20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 ZNF112Q9UJU3 913 aa20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 BAZ2BQ9UIF8 2168 aaKnown RBP20.04■□□□□ 0.8
PPFIA3-207ENST00000602716 IQCA1LA6NCM1 817 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 ASNSP08243 561 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 ASPRV1Q53RT3 343 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 SPZ1Q9BXG8 430 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 DOCK1Q14185 1865 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 ADAMTS3O15072 1205 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 GNAQP50148 359 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 KIF23Q02241 960 aaPredicted RBP20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 DNM1Q05193 864 aaKnown RBP20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 PPP4R3BQ5MIZ7 849 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 TYW1BQ6NUM6 668 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 HOMER1Q86YM7 354 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 GMCL1P1Q8NEA9 526 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 RBSNQ9H1K0 784 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 PAPPA2Q9BXP8 1791 aa20.03■□□□□ 0.8
PPFIA3-207ENST00000602716 CTNND1O60716 968 aaKnown RBP20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 MBD3O95983 291 aa20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 AKAP17AQ02040 695 aaKnown RBP20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 FMR1Q06787 632 aaKnown RBP eCLIP20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 KLRG1Q96E93 195 aa20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 CDCA5Q96FF9 252 aa20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 ARHGEF10LQ9HCE6 1279 aa20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 VAT1LQ9HCJ6 419 aa20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 TMEM63CQ9P1W3 806 aa20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 CNPY2Q9Y2B0 182 aa20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 TMX2Q9Y320 296 aa20.02■□□□□ 0.8
PPFIA3-207ENST00000602716 SCG2P13521 617 aa20.02■□□□□ 0.79
PPFIA3-207ENST00000602716 SLC1A4P43007 532 aa20.02■□□□□ 0.79
PPFIA3-207ENST00000602716 PFKFB3Q16875 520 aaPredicted RBP20.02■□□□□ 0.79
PPFIA3-207ENST00000602716 PIGSQ96S52 555 aa20.02■□□□□ 0.79
PPFIA3-207ENST00000602716 WWC2Q6AWC2 1192 aa20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 MOB2Q70IA6 237 aa20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 SCYL3Q8IZE3 742 aa20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 OXER1Q8TDS5 423 aa20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 ZC3H15Q8WU90 426 aaKnown RBP20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 DCAF4Q8WV16 495 aa20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 WASF1Q92558 559 aa20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 FTOQ9C0B1 505 aaKnown RBP eCLIP20.01■□□□□ 0.79
PPFIA3-207ENST00000602716 USP2O75604 605 aaPredicted RBP20■□□□□ 0.79
PPFIA3-207ENST00000602716 NPY5RQ15761 445 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
PPFIA3-207ENST00000602716 RIOX1Q9H6W3 641 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 RRAGCQ9HB90 399 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 OTOFQ9HC10 1997 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 MYH6P13533 1939 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 MMP1P03956 469 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 SUPT20HL1Q3ZLR7 823 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 MAP1SQ66K74 1059 aaPredicted RBP20■□□□□ 0.79
PPFIA3-207ENST00000602716 LRSAM1Q6UWE0 723 aa20■□□□□ 0.79
PPFIA3-207ENST00000602716 GMCL1Q96IK5 515 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms