RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CPSF1Q10570 1443 aaKnown RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 LMTK2Q8IWU2 1503 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 CDC42BPBQ9Y5S2 1711 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 ADGRB2O60241 1585 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 SAMD9LQ8IVG5 1584 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 TRPM2O94759 1503 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 PABPN1LA6NDY0 278 aaKnown RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 RGL2O15211 777 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 FLOT1O75955 427 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 ALDH2P05091 517 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 TUBA4AP68366 448 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 WDR93Q6P2C0 686 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 ARHGAP18Q8N392 663 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 ENOX1Q8TC92 643 aaKnown RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 APPBP2Q92624 585 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 ANKZF1Q9H8Y5 726 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 ZNF304Q9HCX3 659 aa9.86□□□□□ -0.83
COMMD3-215ENST00000602574 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.86□□□□□ -0.83
COMMD3-215ENST00000602574 APBB1O00213 710 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 MTA2O94776 668 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 GSTA2P09210 222 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 ALADP13716 330 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 HSPA4P34932 840 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 KRT9P35527 623 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 WTAPQ15007 396 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 CCSAPQ6IQ19 270 aaPredicted RBP9.85□□□□□ -0.83
COMMD3-215ENST00000602574 SRGAP1Q7Z6B7 1085 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 THEMISQ8N1K5 641 aaPredicted RBP9.85□□□□□ -0.83
COMMD3-215ENST00000602574 STAMBPL1Q96FJ0 436 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 SPOCK3Q9BQ16 436 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 FAM192AQ9GZU8 254 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 TBCCD1Q9NVR7 557 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 MIS18AQ9NYP9 233 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 SUCLA2Q9P2R7 463 aaPredicted RBP9.85□□□□□ -0.83
COMMD3-215ENST00000602574 ZNF652Q9Y2D9 606 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 NDUFB5O43674 189 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 USO1O60763 962 aaKnown RBP9.85□□□□□ -0.83
COMMD3-215ENST00000602574 RAB11FIP3O75154 756 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 ANP32DO95626 131 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 LDHAP00338 332 aaKnown RBP9.85□□□□□ -0.83
COMMD3-215ENST00000602574 GNAI3P08754 354 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 PLOD1Q02809 727 aaPredicted RBP9.85□□□□□ -0.83
COMMD3-215ENST00000602574 ITIH3Q06033 890 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 FAM69CQ0P6D2 419 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 KANK3Q6NY19 840 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 C3orf62Q6ZUJ4 267 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 HOMER1Q86YM7 354 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 IFT81Q8WYA0 676 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 PMM1Q92871 262 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 VMP1Q96GC9 406 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 NEK1Q96PY6 1258 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 DCTPP1Q9H773 170 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 ABCB6Q9NP58 842 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 SEPT10Q9P0V9 454 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 WWC3Q9ULE0 1092 aa9.85□□□□□ -0.83
COMMD3-215ENST00000602574 IQCA1LA6NCM1 817 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 PFDN1O60925 122 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 TOP1P11387 765 aaKnown RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 ERCC5P28715 1186 aaPredicted RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 PDE1BQ01064 536 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 ITGA7Q13683 1181 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 TBC1D9BQ66K14 1250 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 PPP4R3CPQ6ZMV5 832 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 WDR75Q8IWA0 830 aaKnown RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 CENPTQ96BT3 561 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 IFT43Q96FT9 208 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 DDX27Q96GQ7 796 aaKnown RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 RPGRIP1Q96KN7 1286 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 AS3MTQ9HBK9 375 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 KIAA1522Q9P206 1035 aaPredicted RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 NPHP3Q7Z494 1330 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 DPPA5A6NC42 116 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 TRIM43BA6NCK2 446 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 GOLGA8KD6RF30 607 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 N4BP3O15049 544 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 CLK1P49759 484 aaKnown RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 GUCY2FP51841 1108 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 GNGT1P63211 74 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 GPSM2P81274 684 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 SAFBQ15424 915 aaKnown RBP eCLIP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 SAMD14Q8IZD0 417 aaPredicted RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 LSMEM2Q8N112 164 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 KIFAP3Q92845 792 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 RTFDC1Q9BY42 306 aaPredicted RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 INO80BQ9C086 356 aaPredicted RBP9.84□□□□□ -0.83
COMMD3-215ENST00000602574 NUP62CLQ9H1M0 184 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 ZBTB40Q9NUA8 1239 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 PCDHB2Q9Y5E7 798 aa9.84□□□□□ -0.83
COMMD3-215ENST00000602574 NRXN1Q9ULB1 1477 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 WNT7AO00755 349 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 HSPA1AP0DMV8 641 aaKnown RBP9.83□□□□□ -0.84
COMMD3-215ENST00000602574 HSPA1BP0DMV9 641 aaKnown RBP9.83□□□□□ -0.84
COMMD3-215ENST00000602574 RARSP54136 660 aaKnown RBP9.83□□□□□ -0.84
COMMD3-215ENST00000602574 GEMIN4P57678 1058 aaKnown RBP9.83□□□□□ -0.84
COMMD3-215ENST00000602574 CHMP4BP1P59074 171 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 AKAP17AQ02040 695 aaKnown RBP9.83□□□□□ -0.84
COMMD3-215ENST00000602574 WASHC5Q12768 1159 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 SPIDRQ14159 915 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 SEPT2Q15019 361 aa9.83□□□□□ -0.84
COMMD3-215ENST00000602574 C4orf46Q504U0 113 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms