RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 DCTPP1Q9H773 170 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 GOPCQ9HD26 462 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 ADAMTS5Q9UNA0 930 aa15.78■□□□□ 0.12
RPS28-204ENST00000602140 GSG1L2A8MUP6 293 aa15.77■□□□□ 0.12
RPS28-204ENST00000602140 SLC25A27O95847 323 aa15.77■□□□□ 0.12
RPS28-204ENST00000602140 ATN1P54259 1190 aaPredicted RBP15.77■□□□□ 0.12
RPS28-204ENST00000602140 MDM2Q00987 491 aaPredicted RBP15.77■□□□□ 0.12
RPS28-204ENST00000602140 SBK1Q52WX2 424 aa15.77■□□□□ 0.12
RPS28-204ENST00000602140 PRAMEF19Q5SWL8 479 aa15.77■□□□□ 0.12
RPS28-204ENST00000602140 GJC2Q5T442 439 aaPredicted RBP15.77■□□□□ 0.12
RPS28-204ENST00000602140 APPBP2Q92624 585 aa15.77■□□□□ 0.12
RPS28-204ENST00000602140 OSBP2Q969R2 916 aa15.77■□□□□ 0.12
RPS28-204ENST00000602140 MAML3Q96JK9 1138 aa15.77■□□□□ 0.12
RPS28-204ENST00000602140 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.77■□□□□ 0.12
RPS28-204ENST00000602140 MINDY4BA8MYZ0 360 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 VWA5AO00534 786 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 RNF113AO15541 343 aaKnown RBP15.76■□□□□ 0.11
RPS28-204ENST00000602140 SEPT4O43236 478 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 RASA1P20936 1047 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 LRIT3Q3SXY7 679 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 FAM83BQ5T0W9 1011 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 GIMAP6Q6P9H5 292 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 RIOX2Q8IUF8 465 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 ARRDC4Q8NCT1 418 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 MKNK2Q9HBH9 465 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 PPP1R9AQ9ULJ8 1098 aa15.76■□□□□ 0.11
RPS28-204ENST00000602140 PARP14Q460N5 1801 aa15.75■□□□□ 0.11
RPS28-204ENST00000602140 MYCNP04198 464 aaPredicted RBP15.75■□□□□ 0.11
RPS28-204ENST00000602140 STAT3P40763 770 aa15.75■□□□□ 0.11
RPS28-204ENST00000602140 MMP19Q99542 508 aa15.75■□□□□ 0.11
RPS28-204ENST00000602140 NUP88Q99567 741 aaPredicted RBP15.75■□□□□ 0.11
RPS28-204ENST00000602140 COL11A1P12107 1806 aaPredicted RBP15.74■□□□□ 0.11
RPS28-204ENST00000602140 KBTBD13C9JR72 458 aa15.74■□□□□ 0.11
RPS28-204ENST00000602140 GPAA1O43292 621 aa15.74■□□□□ 0.11
RPS28-204ENST00000602140 PGK2P07205 417 aa15.74■□□□□ 0.11
RPS28-204ENST00000602140 ZFYP08048 801 aaPredicted RBP15.74■□□□□ 0.11
RPS28-204ENST00000602140 RTP1P59025 263 aa15.74■□□□□ 0.11
RPS28-204ENST00000602140 GPR153Q6NV75 609 aa15.74■□□□□ 0.11
RPS28-204ENST00000602140 REPS2Q8NFH8 660 aa15.74■□□□□ 0.11
RPS28-204ENST00000602140 LBHD1Q9BQE6 289 aaPredicted RBP15.74■□□□□ 0.11
RPS28-204ENST00000602140 EPB41L4AQ9HCS5 686 aaPredicted RBP15.74■□□□□ 0.11
RPS28-204ENST00000602140 NYAP2Q9P242 653 aa15.74■□□□□ 0.11
RPS28-204ENST00000602140 ZNF214Q9UL59 606 aaPredicted RBP15.74■□□□□ 0.11
RPS28-204ENST00000602140 ROBO3Q96MS0 1386 aa15.74■□□□□ 0.11
RPS28-204ENST00000602140 COL6A3P12111 3177 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 F5H6K3 240 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 M0R2C6 588 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 APPP05067 770 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 GNAT2P19087 354 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 TDO2P48775 406 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 KLRC3Q07444 240 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 KCTD2Q14681 263 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 SLC39A5Q6ZMH5 540 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 DEFB123Q8N688 67 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 SLF1Q9BQI6 1058 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 ATP11BQ9Y2G3 1177 aa15.73■□□□□ 0.11
RPS28-204ENST00000602140 GREB1LQ9C091 1923 aaPredicted RBP15.72■□□□□ 0.11
RPS28-204ENST00000602140 NDUFB10O96000 172 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 COPB2P35606 906 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 ADCYAP1R1P41586 468 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 LRRC41Q15345 812 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 ZNF792Q3KQV3 632 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 FAM47AQ5JRC9 791 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 Q7L0L9 218 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 ZNF444Q8N0Y2 327 aaPredicted RBP15.72■□□□□ 0.11
RPS28-204ENST00000602140 TINF2Q9BSI4 451 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 CLIP2Q9UDT6 1046 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 PRKAG2Q9UGJ0 569 aa15.72■□□□□ 0.11
RPS28-204ENST00000602140 DIS3Q9Y2L1 958 aaKnown RBP15.72■□□□□ 0.11
RPS28-204ENST00000602140 PATL2C9JE40 543 aaKnown RBP15.71■□□□□ 0.11
RPS28-204ENST00000602140 PRDM1O75626 825 aa15.71■□□□□ 0.11
RPS28-204ENST00000602140 LRRFIP1Q32MZ4 808 aaKnown RBP15.71■□□□□ 0.11
RPS28-204ENST00000602140 FERMT2Q96AC1 680 aa15.71■□□□□ 0.11
RPS28-204ENST00000602140 SEC62Q99442 399 aaKnown RBP15.71■□□□□ 0.11
RPS28-204ENST00000602140 ZNF287Q9HBT7 754 aa15.71■□□□□ 0.11
RPS28-204ENST00000602140 NRBP1Q9UHY1 535 aa15.71■□□□□ 0.11
RPS28-204ENST00000602140 PCDHB15Q9Y5E8 787 aa15.71■□□□□ 0.11
RPS28-204ENST00000602140 TTC41PQ6P2S7 1318 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 ZNFX1Q9P2E3 1918 aaKnown RBP15.7■□□□□ 0.1
RPS28-204ENST00000602140 IGKV6D-41A0A0C4DH26 115 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 RARBP10826 455 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 TAL1P17542 331 aaPredicted RBP15.7■□□□□ 0.1
RPS28-204ENST00000602140 SLC4A3P48751 1232 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 SNRNP48Q6IEG0 339 aaKnown RBP15.7■□□□□ 0.1
RPS28-204ENST00000602140 IFNL3Q8IZI9 196 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 PRPF38AQ8NAV1 312 aaKnown RBP15.7■□□□□ 0.1
RPS28-204ENST00000602140 SLC17A8Q8NDX2 589 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 PI4K2BQ8TCG2 481 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 CEP95Q96GE4 821 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 TEX13BQ9BXU2 312 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 XPNPEP3Q9NQH7 507 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 RIPK3Q9Y572 518 aa15.7■□□□□ 0.1
RPS28-204ENST00000602140 ERC2O15083 957 aa15.69■□□□□ 0.1
RPS28-204ENST00000602140 SNX17Q15036 470 aa15.69■□□□□ 0.1
RPS28-204ENST00000602140 TRIM60Q495X7 471 aa15.69■□□□□ 0.1
RPS28-204ENST00000602140 CPXCR1Q8N123 301 aa15.69■□□□□ 0.1
RPS28-204ENST00000602140 OTUD7AQ8TE49 926 aaPredicted RBP15.69■□□□□ 0.1
RPS28-204ENST00000602140 MKL1Q969V6 931 aa15.69■□□□□ 0.1
RPS28-204ENST00000602140 KIFC2Q96AC6 838 aa15.69■□□□□ 0.1
RPS28-204ENST00000602140 FSD1Q9BTV5 496 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms