RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 HOXC6P09630 235 aa30.99■■■□□ 2.55
PNKP-216ENST00000601816 CEP95Q96GE4 821 aa30.99■■■□□ 2.55
PNKP-216ENST00000601816 MROH8Q9H579 483 aa30.99■■■□□ 2.55
PNKP-216ENST00000601816 PPP1R9AQ9ULJ8 1098 aa30.99■■■□□ 2.55
PNKP-216ENST00000601816 PARP14Q460N5 1801 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 PLIN4Q96Q06 1357 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 F5H6K3 240 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 STRNO43815 780 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 TSPY3P0CV98 308 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 TSPY8P0CW00 308 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 KLRC3Q07444 240 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 VPS53Q5VIR6 699 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 MFSD14CQ5VZR4 134 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 NCAPG2Q86XI2 1143 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 FAM227BQ96M60 508 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 MTMR4Q9NYA4 1195 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 ADAMTS5Q9UNA0 930 aa30.98■■■□□ 2.55
PNKP-216ENST00000601816 NDUFB10O96000 172 aa30.97■■■□□ 2.55
PNKP-216ENST00000601816 TMEM132BQ14DG7 1078 aa30.97■■■□□ 2.55
PNKP-216ENST00000601816 MCMDC2Q4G0Z9 681 aa30.97■■■□□ 2.55
PNKP-216ENST00000601816 ANKLE1Q8NAG6 615 aa30.97■■■□□ 2.55
PNKP-216ENST00000601816 NEDD1Q8NHV4 660 aa30.97■■■□□ 2.55
PNKP-216ENST00000601816 RILPL2Q969X0 211 aa30.97■■■□□ 2.55
PNKP-216ENST00000601816 NUP88Q99567 741 aaPredicted RBP30.97■■■□□ 2.55
PNKP-216ENST00000601816 A0A0D9SFI3 127 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 TTLL1O95922 423 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 ADORA2AP29274 412 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 DPP9Q86TI2 863 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 PLEKHM2Q8IWE5 1019 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 NPLOC4Q8TAT6 608 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 FLRT1Q9NZU1 646 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 SYNPO2Q9UMS6 1093 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 ZNF236Q9UL36 1845 aa30.96■■■□□ 2.55
PNKP-216ENST00000601816 VWA5AO00534 786 aa30.95■■■□□ 2.55
PNKP-216ENST00000601816 SLC25A27O95847 323 aa30.95■■■□□ 2.55
PNKP-216ENST00000601816 CCND3P30281 292 aaPredicted RBP30.95■■■□□ 2.55
PNKP-216ENST00000601816 TFAP4Q01664 338 aa30.95■■■□□ 2.55
PNKP-216ENST00000601816 FAM47AQ5JRC9 791 aa30.95■■■□□ 2.55
PNKP-216ENST00000601816 MKL1Q969V6 931 aa30.95■■■□□ 2.55
PNKP-216ENST00000601816 PAWRQ96IZ0 340 aaKnown RBP30.95■■■□□ 2.55
PNKP-216ENST00000601816 H0YGN5 161 aa30.94■■■□□ 2.54
PNKP-216ENST00000601816 NMIQ13287 307 aaPredicted RBP30.94■■■□□ 2.54
PNKP-216ENST00000601816 NECAB2Q7Z6G3 386 aa30.94■■■□□ 2.54
PNKP-216ENST00000601816 LRRC47Q8N1G4 583 aaKnown RBP30.94■■■□□ 2.54
PNKP-216ENST00000601816 SLF1Q9BQI6 1058 aa30.94■■■□□ 2.54
PNKP-216ENST00000601816 OSBPL3Q9H4L5 887 aa30.94■■■□□ 2.54
PNKP-216ENST00000601816 OGDHLQ9ULD0 1010 aa30.94■■■□□ 2.54
PNKP-216ENST00000601816 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.94■■■□□ 2.54
PNKP-216ENST00000601816 CTDSPL2Q05D32 466 aa30.93■■■□□ 2.54
PNKP-216ENST00000601816 ALX1Q15699 326 aa30.93■■■□□ 2.54
PNKP-216ENST00000601816 ABRAQ8N0Z2 381 aa30.93■■■□□ 2.54
PNKP-216ENST00000601816 DIS3LQ8TF46 1054 aaKnown RBP30.93■■■□□ 2.54
PNKP-216ENST00000601816 RIOX2Q8IUF8 465 aa30.92■■■□□ 2.54
PNKP-216ENST00000601816 SLC5A4Q9NY91 659 aa30.92■■■□□ 2.54
PNKP-216ENST00000601816 ANAPC4Q9UJX5 808 aa30.92■■■□□ 2.54
PNKP-216ENST00000601816 MYH4Q9Y623 1939 aa30.92■■■□□ 2.54
PNKP-216ENST00000601816 FCER1AP12319 257 aa30.91■■■□□ 2.54
PNKP-216ENST00000601816 STAT3P40763 770 aa30.91■■■□□ 2.54
PNKP-216ENST00000601816 PPP4R3BQ5MIZ7 849 aa30.91■■■□□ 2.54
PNKP-216ENST00000601816 GMCL1P1Q8NEA9 526 aa30.91■■■□□ 2.54
PNKP-216ENST00000601816 ZNF214Q9UL59 606 aaPredicted RBP30.91■■■□□ 2.54
PNKP-216ENST00000601816 COL11A1P12107 1806 aaPredicted RBP30.9■■■□□ 2.54
PNKP-216ENST00000601816 TSPY2A6NKD2 308 aa30.9■■■□□ 2.54
PNKP-216ENST00000601816 CYP2C19P33261 490 aa30.9■■■□□ 2.54
PNKP-216ENST00000601816 COPB2P35606 906 aa30.9■■■□□ 2.54
PNKP-216ENST00000601816 OLFML2BQ68BL8 750 aa30.9■■■□□ 2.54
PNKP-216ENST00000601816 ZNF589Q86UQ0 364 aaPredicted RBP30.9■■■□□ 2.54
PNKP-216ENST00000601816 REPS2Q8NFH8 660 aa30.9■■■□□ 2.54
PNKP-216ENST00000601816 NR2E3Q9Y5X4 410 aa30.9■■■□□ 2.54
PNKP-216ENST00000601816 CCDC171Q6TFL3 1326 aa30.9■■■□□ 2.54
PNKP-216ENST00000601816 COBLO75128 1261 aa30.89■■■□□ 2.54
PNKP-216ENST00000601816 PRPF38AQ8NAV1 312 aaKnown RBP30.89■■■□□ 2.54
PNKP-216ENST00000601816 NBPF3Q9H094 633 aa30.89■■■□□ 2.54
PNKP-216ENST00000601816 INCENPQ9NQS7 918 aa30.89■■■□□ 2.54
PNKP-216ENST00000601816 SLC34A2O95436 690 aa30.88■■■□□ 2.53
PNKP-216ENST00000601816 FGAP02671 866 aa30.88■■■□□ 2.53
PNKP-216ENST00000601816 HSPD1P10809 573 aaKnown RBP30.88■■■□□ 2.53
PNKP-216ENST00000601816 SDSP20132 328 aa30.88■■■□□ 2.53
PNKP-216ENST00000601816 MNX1P50219 401 aaPredicted RBP30.88■■■□□ 2.53
PNKP-216ENST00000601816 SLFN13Q68D06 897 aa30.88■■■□□ 2.53
PNKP-216ENST00000601816 MMP19Q99542 508 aa30.88■■■□□ 2.53
PNKP-216ENST00000601816 FEM1BQ9UK73 627 aa30.88■■■□□ 2.53
PNKP-216ENST00000601816 RANBP6O60518 1105 aaKnown RBP30.87■■■□□ 2.53
PNKP-216ENST00000601816 IGHA2P01877 340 aa30.87■■■□□ 2.53
PNKP-216ENST00000601816 LHX8Q68G74 356 aa30.87■■■□□ 2.53
PNKP-216ENST00000601816 TEX13BQ9BXU2 312 aa30.87■■■□□ 2.53
PNKP-216ENST00000601816 CTDP1Q9Y5B0 961 aaPredicted RBP30.87■■■□□ 2.53
PNKP-216ENST00000601816 ORC4O43929 436 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 EVI5O60447 810 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 CNGA1P29973 690 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 MFAP1P55081 439 aaKnown RBP30.86■■■□□ 2.53
PNKP-216ENST00000601816 KCTD2Q14681 263 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 KIFC2Q96AC6 838 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 C11orf49Q9H6J7 331 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 STX8Q9UNK0 236 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 TACC3Q9Y6A5 838 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 ZMYM6O95789 1325 aa30.86■■■□□ 2.53
PNKP-216ENST00000601816 MSCO60682 206 aa30.85■■■□□ 2.53
PNKP-216ENST00000601816 ZBED4O75132 1171 aa30.85■■■□□ 2.53
PNKP-216ENST00000601816 BMP3P12645 472 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms