RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 PLEKHH3Q7Z736 793 aa20.75■□□□□ 0.91
IRF3-230ENST00000601809 MB21D1Q8N884 522 aa20.75■□□□□ 0.91
IRF3-230ENST00000601809 NUP88Q99567 741 aaPredicted RBP20.75■□□□□ 0.91
IRF3-230ENST00000601809 MOV10L1Q9BXT6 1211 aaKnown RBP20.75■□□□□ 0.91
IRF3-230ENST00000601809 SPATC1LQ9H0A9 340 aa20.75■□□□□ 0.91
IRF3-230ENST00000601809 PPP1R9AQ9ULJ8 1098 aa20.75■□□□□ 0.91
IRF3-230ENST00000601809 RAD50Q92878 1312 aa20.75■□□□□ 0.91
IRF3-230ENST00000601809 HAND2P61296 217 aa20.74■□□□□ 0.91
IRF3-230ENST00000601809 MLLT1Q03111 559 aaPredicted RBP20.74■□□□□ 0.91
IRF3-230ENST00000601809 SKAP1Q86WV1 359 aa20.74■□□□□ 0.91
IRF3-230ENST00000601809 LRRC47Q8N1G4 583 aaKnown RBP20.74■□□□□ 0.91
IRF3-230ENST00000601809 TCP11L1Q9NUJ3 509 aa20.74■□□□□ 0.91
IRF3-230ENST00000601809 TSPY2A6NKD2 308 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 IGHA2P01877 340 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 PCP11498 1178 aaKnown RBP20.73■□□□□ 0.91
IRF3-230ENST00000601809 XRCC5P13010 732 aaKnown RBP20.73■□□□□ 0.91
IRF3-230ENST00000601809 EN2P19622 333 aaPredicted RBP20.73■□□□□ 0.91
IRF3-230ENST00000601809 CCNA1P78396 465 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 TMEM132BQ14DG7 1078 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 AKNAD1Q5T1N1 836 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 SHCBP1Q8NEM2 672 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 SOCS4Q8WXH5 440 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 TRIB2Q92519 343 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 SHISA4Q96DD7 197 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 NUDT12Q9BQG2 462 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 ZNF214Q9UL59 606 aaPredicted RBP20.73■□□□□ 0.91
IRF3-230ENST00000601809 NEDD4P46934 1319 aa20.73■□□□□ 0.91
IRF3-230ENST00000601809 VWA5AO00534 786 aa20.72■□□□□ 0.91
IRF3-230ENST00000601809 INHAP05111 366 aa20.72■□□□□ 0.91
IRF3-230ENST00000601809 CCL5P13501 91 aa20.72■□□□□ 0.91
IRF3-230ENST00000601809 PTPREP23469 700 aa20.72■□□□□ 0.91
IRF3-230ENST00000601809 GRB14Q14449 540 aa20.72■□□□□ 0.91
IRF3-230ENST00000601809 RANBP6O60518 1105 aaKnown RBP20.71■□□□□ 0.91
IRF3-230ENST00000601809 HOXC6P09630 235 aa20.71■□□□□ 0.91
IRF3-230ENST00000601809 TRIM32Q13049 653 aa20.71■□□□□ 0.91
IRF3-230ENST00000601809 MAP3K21Q5TCX8 1036 aa20.71■□□□□ 0.91
IRF3-230ENST00000601809 RCSD1Q6JBY9 416 aa20.71■□□□□ 0.91
IRF3-230ENST00000601809 GMCL1Q96IK5 515 aa20.71■□□□□ 0.91
IRF3-230ENST00000601809 UNC93B1Q9H1C4 597 aa20.71■□□□□ 0.91
IRF3-230ENST00000601809 SLC15A5A6NIM6 579 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 SGSM2O43147 1006 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 MYCP01106 439 aaPredicted RBP20.7■□□□□ 0.9
IRF3-230ENST00000601809 HMGCRP04035 888 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 ERCC3P19447 782 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 UBXN2AP68543 259 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 MAP2K5Q13163 448 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 SLFN13Q68D06 897 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 SLF1Q9BQI6 1058 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 TMEM106CQ9BVX2 250 aa20.7■□□□□ 0.9
IRF3-230ENST00000601809 PAK6Q9NQU5 681 aaPredicted RBP20.7■□□□□ 0.9
IRF3-230ENST00000601809 ZNFX1Q9P2E3 1918 aaKnown RBP20.69■□□□□ 0.9
IRF3-230ENST00000601809 ZNF213O14771 459 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 GJB1P08034 283 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 CYP2B6P20813 491 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 PTH1RQ03431 593 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 CCL14Q16627 93 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 PPP4R3BQ5MIZ7 849 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 MFSD6Q6ZSS7 791 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 RASGRP2Q7LDG7 609 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 RIOX2Q8IUF8 465 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 APBA2Q99767 749 aa20.69■□□□□ 0.9
IRF3-230ENST00000601809 ATP2A1O14983 1001 aa20.68■□□□□ 0.9
IRF3-230ENST00000601809 RGS2P41220 211 aa20.68■□□□□ 0.9
IRF3-230ENST00000601809 GJA8P48165 433 aa20.68■□□□□ 0.9
IRF3-230ENST00000601809 PRPF38AQ8NAV1 312 aaKnown RBP20.68■□□□□ 0.9
IRF3-230ENST00000601809 RNF41Q9H4P4 317 aaPredicted RBP20.68■□□□□ 0.9
IRF3-230ENST00000601809 FLRT1Q9NZU1 646 aa20.68■□□□□ 0.9
IRF3-230ENST00000601809 FEM1BQ9UK73 627 aa20.68■□□□□ 0.9
IRF3-230ENST00000601809 STX8Q9UNK0 236 aa20.68■□□□□ 0.9
IRF3-230ENST00000601809 RAD21O60216 631 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 PLA2G6O60733 806 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 BMP3P12645 472 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 NT5C2P49902 561 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 RRP12Q5JTH9 1297 aaKnown RBP20.67■□□□□ 0.9
IRF3-230ENST00000601809 UBE2Q1Q7Z7E8 422 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 ABRAQ8N0Z2 381 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 NPLOC4Q8TAT6 608 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 TMEM47Q9BQJ4 181 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 RNF208Q9H0X6 261 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 MROH8Q9H579 483 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 SLC38A10Q9HBR0 1119 aa20.67■□□□□ 0.9
IRF3-230ENST00000601809 BIN2Q9UBW5 565 aaPredicted RBP20.67■□□□□ 0.9
IRF3-230ENST00000601809 STRNO43815 780 aa20.66■□□□□ 0.9
IRF3-230ENST00000601809 SLC25A27O95847 323 aa20.66■□□□□ 0.9
IRF3-230ENST00000601809 BMP2KLQ5H9B9 411 aa20.66■□□□□ 0.9
IRF3-230ENST00000601809 CCAR1Q8IX12 1150 aaKnown RBP20.66■□□□□ 0.9
IRF3-230ENST00000601809 TRMT44Q8IYL2 757 aaKnown RBP20.66■□□□□ 0.9
IRF3-230ENST00000601809 RUFY2Q8WXA3 655 aa20.66■□□□□ 0.9
IRF3-230ENST00000601809 TOMM22Q9NS69 142 aa20.66■□□□□ 0.9
IRF3-230ENST00000601809 CTNNA3Q9UI47 895 aa20.66■□□□□ 0.9
IRF3-230ENST00000601809 PDE4DIPQ5VU43 2346 aa20.65■□□□□ 0.9
IRF3-230ENST00000601809 COBLO75128 1261 aa20.65■□□□□ 0.9
IRF3-230ENST00000601809 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
IRF3-230ENST00000601809 MCCP23508 829 aa20.65■□□□□ 0.9
IRF3-230ENST00000601809 ADORA2AP29274 412 aa20.65■□□□□ 0.9
IRF3-230ENST00000601809 STAT3P40763 770 aa20.65■□□□□ 0.9
IRF3-230ENST00000601809 IMMTQ16891 758 aaKnown RBP20.65■□□□□ 0.9
IRF3-230ENST00000601809 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.65■□□□□ 0.9
IRF3-230ENST00000601809 U2AF1L4Q8WU68 220 aaKnown RBP20.65■□□□□ 0.9
IRF3-230ENST00000601809 ESR2Q92731 530 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms