RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 PHKBQ93100 1093 aa26.73■■□□□ 1.87
IRF3-227ENST00000600911 GPCPD1Q9NPB8 672 aa26.73■■□□□ 1.87
IRF3-227ENST00000600911 RLFQ13129 1914 aa26.73■■□□□ 1.87
IRF3-227ENST00000600911 CYTH3O43739 400 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 CALM1P0DP23 149 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 CALM2P0DP24 149 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 CALM3P0DP25 149 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 HMGCS2P54868 508 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 MAP3K14Q99558 947 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 UBA5Q9GZZ9 404 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 AS3MTQ9HBK9 375 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 CNTNAP5Q8WYK1 1306 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 PARP1P09874 1014 aaKnown RBP26.72■■□□□ 1.87
IRF3-227ENST00000600911 HUNKP57058 714 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 PPATQ06203 517 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 FAM83BQ5T0W9 1011 aa26.72■■□□□ 1.87
IRF3-227ENST00000600911 CTCFLQ8NI51 663 aaPredicted RBP26.72■■□□□ 1.87
IRF3-227ENST00000600911 hCG_1642624A0A1W2PR95 340 aa26.71■■□□□ 1.87
IRF3-227ENST00000600911 FDPSP14324 419 aaKnown RBP26.71■■□□□ 1.87
IRF3-227ENST00000600911 SLC16A2P36021 539 aa26.71■■□□□ 1.87
IRF3-227ENST00000600911 MKRN3Q13064 507 aaKnown RBP26.71■■□□□ 1.87
IRF3-227ENST00000600911 CCDC96Q2M329 555 aa26.71■■□□□ 1.87
IRF3-227ENST00000600911 SAPCD2Q86UD0 394 aa26.71■■□□□ 1.87
IRF3-227ENST00000600911 SMARCC2Q8TAQ2 1214 aa26.71■■□□□ 1.87
IRF3-227ENST00000600911 DDX11Q96FC9 970 aa26.71■■□□□ 1.87
IRF3-227ENST00000600911 GMCL1Q96IK5 515 aa26.71■■□□□ 1.87
IRF3-227ENST00000600911 SYNPO2Q9UMS6 1093 aa26.71■■□□□ 1.87
IRF3-227ENST00000600911 PTPDC1A2A3K4 754 aa26.7■■□□□ 1.86
IRF3-227ENST00000600911 SLC1A4P43007 532 aa26.7■■□□□ 1.86
IRF3-227ENST00000600911 DCAF4Q8WV16 495 aa26.7■■□□□ 1.86
IRF3-227ENST00000600911 SLC10A4Q96EP9 437 aa26.7■■□□□ 1.86
IRF3-227ENST00000600911 GOPCQ9HD26 462 aa26.7■■□□□ 1.86
IRF3-227ENST00000600911 KLRF2D3W0D1 207 aa26.69■■□□□ 1.86
IRF3-227ENST00000600911 PPIL2Q13356 520 aa26.69■■□□□ 1.86
IRF3-227ENST00000600911 MOGSQ13724 837 aa26.69■■□□□ 1.86
IRF3-227ENST00000600911 WNK4Q96J92 1243 aa26.69■■□□□ 1.86
IRF3-227ENST00000600911 KCNH4Q9UQ05 1017 aa26.69■■□□□ 1.86
IRF3-227ENST00000600911 VCAM1P19320 739 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 SH2D4AQ9H788 454 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 FBXO28Q9NVF7 368 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 RBM28Q9NW13 759 aaKnown RBP26.68■■□□□ 1.86
IRF3-227ENST00000600911 BMP3P12645 472 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 IFNAR1P17181 557 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 FSTL1Q12841 308 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 ASPRV1Q53RT3 343 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 SH3D19Q5HYK7 790 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 PIBF1Q8WXW3 757 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 INTS4Q96HW7 963 aaKnown RBP26.68■■□□□ 1.86
IRF3-227ENST00000600911 AIFM3Q96NN9 605 aa26.68■■□□□ 1.86
IRF3-227ENST00000600911 SMCHD1A6NHR9 2005 aa26.67■■□□□ 1.86
IRF3-227ENST00000600911 GJB2P29033 226 aa26.67■■□□□ 1.86
IRF3-227ENST00000600911 C12orf42Q96LP6 360 aa26.67■■□□□ 1.86
IRF3-227ENST00000600911 ISY1Q9ULR0 285 aaKnown RBP26.67■■□□□ 1.86
IRF3-227ENST00000600911 TLL2Q9Y6L7 1015 aa26.67■■□□□ 1.86
IRF3-227ENST00000600911 A0A0G2JLL6 359 aaPredicted RBP26.66■■□□□ 1.86
IRF3-227ENST00000600911 UNCXA6NJT0 531 aa26.66■■□□□ 1.86
IRF3-227ENST00000600911 TMEM232C9JQI7 657 aa26.66■■□□□ 1.86
IRF3-227ENST00000600911 CPLX1O14810 134 aa26.66■■□□□ 1.86
IRF3-227ENST00000600911 KIF5BP33176 963 aa26.66■■□□□ 1.86
IRF3-227ENST00000600911 TREML2Q5T2D2 321 aa26.66■■□□□ 1.86
IRF3-227ENST00000600911 PRRT2Q7Z6L0 340 aaPredicted RBP26.66■■□□□ 1.86
IRF3-227ENST00000600911 SLC26A6Q9BXS9 759 aa26.66■■□□□ 1.86
IRF3-227ENST00000600911 RASAL3Q86YV0 1011 aa26.65■■□□□ 1.86
IRF3-227ENST00000600911 SHISA4Q96DD7 197 aa26.65■■□□□ 1.86
IRF3-227ENST00000600911 COL11A1P12107 1806 aaPredicted RBP26.65■■□□□ 1.86
IRF3-227ENST00000600911 C19orf81C9J6K1 198 aa26.65■■□□□ 1.86
IRF3-227ENST00000600911 USP14P54578 494 aa26.65■■□□□ 1.86
IRF3-227ENST00000600911 SNAP25P60880 206 aa26.65■■□□□ 1.86
IRF3-227ENST00000600911 PKN1Q16512 942 aa26.65■■□□□ 1.86
IRF3-227ENST00000600911 LLPHQ9BRT6 129 aaKnown RBP26.65■■□□□ 1.86
IRF3-227ENST00000600911 RPAP3Q9H6T3 665 aaPredicted RBP26.65■■□□□ 1.86
IRF3-227ENST00000600911 VAT1LQ9HCJ6 419 aa26.65■■□□□ 1.86
IRF3-227ENST00000600911 GJB4Q9NTQ9 266 aa26.65■■□□□ 1.86
IRF3-227ENST00000600911 CCDC196A0A1B0GTZ2 297 aa26.64■■□□□ 1.85
IRF3-227ENST00000600911 TMEM88BA6NKF7 163 aa26.64■■□□□ 1.85
IRF3-227ENST00000600911 FMNL1O95466 1100 aaPredicted RBP26.64■■□□□ 1.85
IRF3-227ENST00000600911 HSP90AA1P07900 732 aaKnown RBP26.64■■□□□ 1.85
IRF3-227ENST00000600911 PPP2R5BQ15173 497 aa26.64■■□□□ 1.85
IRF3-227ENST00000600911 GPATCH4Q5T3I0 446 aaKnown RBP26.64■■□□□ 1.85
IRF3-227ENST00000600911 SPRYD7Q5W111 196 aa26.64■■□□□ 1.85
IRF3-227ENST00000600911 LPAR1Q92633 364 aa26.64■■□□□ 1.85
IRF3-227ENST00000600911 MS4A4AQ96JQ5 239 aa26.64■■□□□ 1.85
IRF3-227ENST00000600911 RIOX1Q9H6W3 641 aa26.64■■□□□ 1.85
IRF3-227ENST00000600911 SMC3Q9UQE7 1217 aa26.64■■□□□ 1.85
IRF3-227ENST00000600911 WDR46O15213 610 aaKnown RBP26.63■■□□□ 1.85
IRF3-227ENST00000600911 ADGRF4Q8IZF3 695 aa26.63■■□□□ 1.85
IRF3-227ENST00000600911 JMJD4Q9H9V9 463 aa26.63■■□□□ 1.85
IRF3-227ENST00000600911 ORC3Q9UBD5 711 aaPredicted RBP26.63■■□□□ 1.85
IRF3-227ENST00000600911 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.63■■□□□ 1.85
IRF3-227ENST00000600911 V9GY48 417 aaPredicted RBP26.63■■□□□ 1.85
IRF3-227ENST00000600911 CXCL11O14625 94 aa26.62■■□□□ 1.85
IRF3-227ENST00000600911 DHX16O60231 1041 aaKnown RBP26.62■■□□□ 1.85
IRF3-227ENST00000600911 TAL1P17542 331 aaPredicted RBP26.62■■□□□ 1.85
IRF3-227ENST00000600911 DDIT3P35638 169 aa26.62■■□□□ 1.85
IRF3-227ENST00000600911 FOSBP53539 338 aa26.62■■□□□ 1.85
IRF3-227ENST00000600911 BTNL9Q6UXG8 535 aa26.62■■□□□ 1.85
IRF3-227ENST00000600911 PIGSQ96S52 555 aa26.62■■□□□ 1.85
IRF3-227ENST00000600911 SPZ1Q9BXG8 430 aa26.62■■□□□ 1.85
IRF3-227ENST00000600911 ZNF157P51786 506 aaPredicted RBP26.61■■□□□ 1.85
IRF3-227ENST00000600911 RGMBQ6NW40 437 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms