RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 TCRBV5S4A2TA0A5A2 114 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 HLA-DOAP06340 250 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 CYP2D6P10635 497 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 ZKSCAN1P17029 563 aaPredicted RBP12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 MAPK4P31152 587 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 USP5P45974 858 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 AACSQ86V21 672 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 TIFAQ96CG3 184 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 RNPC3Q96LT9 517 aaKnown RBP12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 KIAA1683Q9H0B3 1180 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 ZBED9Q6R2W3 1325 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 DNAH14Q0VDD8 3507 aa12.29□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 MAST4O15021 2626 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 USP24Q9UPU5 2620 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 PDE6AP16499 860 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 IGFBP4P22692 258 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 RGS2P41220 211 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 MAP2K5Q13163 448 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 COL9A2Q14055 689 aaPredicted RBP12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SEPT2Q15019 361 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 RAB3GAP1Q15042 981 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 ABCB5Q2M3G0 1257 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 LBX2Q6XYB7 198 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SIAH1Q8IUQ4 282 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SIRT2Q8IXJ6 389 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 LCORLQ8N3X6 602 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 SDR42E1Q8WUS8 393 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 TRIM34Q9BYJ4 488 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 RABGAP1Q9Y3P9 1069 aa12.28□□□□□ -0.44
MIA-RAB4B-201ENST00000600729 USP17L15C9J2P7 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP17L13C9JLJ4 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP17L11C9JVI0 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP17L18D6R9N7 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP17L22D6RA61 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 GFRA3O60609 400 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 PTPREP23469 700 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 GRB14Q14449 540 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CSPP1Q1MSJ5 1256 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CERKLQ49MI3 558 aaPredicted RBP12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 FTSJ3Q8IY81 847 aaKnown RBP12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 FEZ1Q99689 392 aa12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 RPAP3Q9H6T3 665 aaPredicted RBP12.27□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ZNF292O60281 2723 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 PRKAB2O43741 272 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 TLL1O43897 1013 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 IGSF3O75054 1194 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CYP2C19P33261 490 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 RHPN1Q8TCX5 695 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 BADQ92934 168 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 DYNLL2Q96FJ2 89 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CD320Q9NPF0 282 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ZNF532Q9HCE3 1301 aa12.26□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 FLNBO75369 2602 aaKnown RBP12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 DMDP11532 3685 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CYP2D7A0A087X1C5 515 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MAGEB6P1A0A0J9YX57 407 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 SLC15A5A6NIM6 579 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ERC2O15083 957 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 HOXC6P09630 235 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CYBAP13498 195 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 TTC6Q86TZ1 520 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 GTF3C2Q8WUA4 911 aaPredicted RBP12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MOV10L1Q9BXT6 1211 aaKnown RBP12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 DCP1AQ9NPI6 582 aaPredicted RBP12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 PLXNA3P51805 1871 aa12.25□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 APBB1O00213 710 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 GOLIM4O00461 696 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MCM3APO60318 1980 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 COBLO75128 1261 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 USP14P54578 494 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 SLC9C2Q5TAH2 1124 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 WDR78Q5VTH9 848 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ANO1Q5XXA6 986 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 TRMT44Q8IYL2 757 aaKnown RBP12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 DNAJC2Q99543 621 aaKnown RBP12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ARMT1Q9H993 441 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MCM9Q9NXL9 1143 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 DDX20Q9UHI6 824 aaKnown RBP12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MYH4Q9Y623 1939 aa12.24□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 POLR3DP05423 398 aaPredicted RBP12.23□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 AKR1B1P15121 316 aa12.23□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ATN1P54259 1190 aaPredicted RBP12.23□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ANKS1AQ92625 1134 aa12.23□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 SENP6Q9GZR1 1112 aaPredicted RBP12.23□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ADORA2AP29274 412 aa12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 RTP1P59025 263 aa12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 PRAMEF19Q5SWL8 479 aa12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CERS3Q8IU89 383 aa12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 MICALL1Q8N3F8 863 aa12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 ATG4CQ96DT6 458 aa12.22□□□□□ -0.45
MIA-RAB4B-201ENST00000600729 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms