RNA–Protein interactions for RNA: ENST00000600297.1

SLC27A1-209, Transcript of solute carrier family 27 member 1, humanhuman

TSL 2

Gene SLC27A1, Length 1,163 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-209ENST00000600297 NBPF3Q9H094 633 aa27.41■■□□□ 1.98
SLC27A1-209ENST00000600297 TXNRD2Q9NNW7 524 aa27.41■■□□□ 1.98
SLC27A1-209ENST00000600297 TCP11L1Q9NUJ3 509 aa27.41■■□□□ 1.98
SLC27A1-209ENST00000600297 FLOT1O75955 427 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 INHAP05111 366 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 GJB1P08034 283 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 CCNA1P78396 465 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 RRP12Q5JTH9 1297 aaKnown RBP27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 MB21D1Q8N884 522 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 GMCL1P1Q8NEA9 526 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 PAGR1Q9BTK6 254 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 UNC93B1Q9H1C4 597 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 IL17RBQ9NRM6 502 aa27.4■■□□□ 1.98
SLC27A1-209ENST00000600297 DSG3P32926 999 aa27.39■■□□□ 1.98
SLC27A1-209ENST00000600297 NOVP48745 357 aa27.39■■□□□ 1.98
SLC27A1-209ENST00000600297 SKAP1Q86WV1 359 aa27.39■■□□□ 1.98
SLC27A1-209ENST00000600297 TBC1D10CQ8IV04 446 aa27.39■■□□□ 1.98
SLC27A1-209ENST00000600297 ESR2Q92731 530 aa27.39■■□□□ 1.98
SLC27A1-209ENST00000600297 SHISA4Q96DD7 197 aa27.39■■□□□ 1.98
SLC27A1-209ENST00000600297 STX8Q9UNK0 236 aa27.39■■□□□ 1.98
SLC27A1-209ENST00000600297 RAD21O60216 631 aa27.38■■□□□ 1.97
SLC27A1-209ENST00000600297 NDUFB10O96000 172 aa27.38■■□□□ 1.97
SLC27A1-209ENST00000600297 MAPK4P31152 587 aa27.38■■□□□ 1.97
SLC27A1-209ENST00000600297 GJA8P48165 433 aa27.38■■□□□ 1.97
SLC27A1-209ENST00000600297 POTEEQ6S8J3 1075 aa27.38■■□□□ 1.97
SLC27A1-209ENST00000600297 CCAR1Q8IX12 1150 aaKnown RBP27.38■■□□□ 1.97
SLC27A1-209ENST00000600297 U3KPZ7 1027 aaPredicted RBP27.38■■□□□ 1.97
SLC27A1-209ENST00000600297 A0A0G2JMZ2 1700 aa27.38■■□□□ 1.97
SLC27A1-209ENST00000600297 Q3C1V9 767 aa27.37■■□□□ 1.97
SLC27A1-209ENST00000600297 FAM83BQ5T0W9 1011 aa27.37■■□□□ 1.97
SLC27A1-209ENST00000600297 CNNM2Q9H8M5 875 aa27.37■■□□□ 1.97
SLC27A1-209ENST00000600297 PEX10O60683 326 aa27.36■■□□□ 1.97
SLC27A1-209ENST00000600297 CNMDO75829 334 aa27.36■■□□□ 1.97
SLC27A1-209ENST00000600297 KIAA1211Q6ZU35 1233 aa27.36■■□□□ 1.97
SLC27A1-209ENST00000600297 LRRC47Q8N1G4 583 aaKnown RBP27.36■■□□□ 1.97
SLC27A1-209ENST00000600297 TTC14Q96N46 770 aa27.36■■□□□ 1.97
SLC27A1-209ENST00000600297 ADAMTS5Q9UNA0 930 aa27.36■■□□□ 1.97
SLC27A1-209ENST00000600297 PTH1RQ03431 593 aa27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 CCDC178Q5BJE1 867 aa27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 CASC1Q6TDU7 716 aa27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 U2AF1L4Q8WU68 220 aaKnown RBP27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 MAP4K1Q92918 833 aa27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 ESYT1Q9BSJ8 1104 aa27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 KRT23Q9C075 422 aa27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 CWC22Q9HCG8 908 aaKnown RBP27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 BTBD7Q9P203 1132 aa27.35■■□□□ 1.97
SLC27A1-209ENST00000600297 NMT2O60551 498 aa27.34■■□□□ 1.97
SLC27A1-209ENST00000600297 SLFN13Q68D06 897 aa27.34■■□□□ 1.97
SLC27A1-209ENST00000600297 GMCL1Q96IK5 515 aa27.34■■□□□ 1.97
SLC27A1-209ENST00000600297 PPP1R9AQ9ULJ8 1098 aa27.34■■□□□ 1.97
SLC27A1-209ENST00000600297 BRCA2P51587 3418 aa27.34■■□□□ 1.97
SLC27A1-209ENST00000600297 NEDD4P46934 1319 aa27.34■■□□□ 1.97
SLC27A1-209ENST00000600297 CEP290O15078 2479 aa27.33■■□□□ 1.97
SLC27A1-209ENST00000600297 HMGCRP04035 888 aa27.33■■□□□ 1.97
SLC27A1-209ENST00000600297 IQCA1Q86XH1 822 aa27.33■■□□□ 1.97
SLC27A1-209ENST00000600297 PRPF38AQ8NAV1 312 aaKnown RBP27.33■■□□□ 1.97
SLC27A1-209ENST00000600297 ATG4CQ96DT6 458 aa27.33■■□□□ 1.97
SLC27A1-209ENST00000600297 NUDT12Q9BQG2 462 aa27.33■■□□□ 1.97
SLC27A1-209ENST00000600297 GJD2Q9UKL4 321 aa27.33■■□□□ 1.97
SLC27A1-209ENST00000600297 COL11A1P12107 1806 aaPredicted RBP27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 SGPL1O95470 568 aa27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 TOP1P11387 765 aaKnown RBP27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 BMP3P12645 472 aa27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 SOCS4Q8WXH5 440 aa27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 SLF1Q9BQI6 1058 aa27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 SPATC1LQ9H0A9 340 aa27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 PORCNQ9H237 461 aa27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 FBXO28Q9NVF7 368 aa27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 FEM1BQ9UK73 627 aa27.32■■□□□ 1.96
SLC27A1-209ENST00000600297 CDC45O75419 566 aa27.31■■□□□ 1.96
SLC27A1-209ENST00000600297 CYP2B6P20813 491 aa27.31■■□□□ 1.96
SLC27A1-209ENST00000600297 PLEKHH3Q7Z736 793 aa27.31■■□□□ 1.96
SLC27A1-209ENST00000600297 SHCBP1Q8NEM2 672 aa27.31■■□□□ 1.96
SLC27A1-209ENST00000600297 DEFB118Q96PH6 123 aa27.31■■□□□ 1.96
SLC27A1-209ENST00000600297 NUP88Q99567 741 aaPredicted RBP27.31■■□□□ 1.96
SLC27A1-209ENST00000600297 VWA5AO00534 786 aa27.3■■□□□ 1.96
SLC27A1-209ENST00000600297 KDM4AO75164 1064 aa27.3■■□□□ 1.96
SLC27A1-209ENST00000600297 FARP2O94887 1054 aaPredicted RBP27.3■■□□□ 1.96
SLC27A1-209ENST00000600297 CYP21A2P08686 494 aa27.3■■□□□ 1.96
SLC27A1-209ENST00000600297 SLC1A4P43007 532 aa27.3■■□□□ 1.96
SLC27A1-209ENST00000600297 TRDNQ13061 729 aa27.3■■□□□ 1.96
SLC27A1-209ENST00000600297 GPR142Q7Z601 462 aa27.3■■□□□ 1.96
SLC27A1-209ENST00000600297 DGKHQ86XP1 1220 aa27.3■■□□□ 1.96
SLC27A1-209ENST00000600297 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.3■■□□□ 1.969e-6■■■■■ 32.4
SLC27A1-209ENST00000600297 MKI67P46013 3256 aaKnown RBP27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 B4E1Z4 1266 aa27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 PLA2G6O60733 806 aa27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 SLC34A2O95436 690 aa27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 TFRCP02786 760 aaKnown RBP27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 FDX1P10109 184 aa27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 TMEM47Q9BQJ4 181 aa27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 LSG1Q9H089 658 aaKnown RBP27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 ZSWIM5Q9P217 1185 aa27.29■■□□□ 1.96
SLC27A1-209ENST00000600297 WDR78Q5VTH9 848 aa27.28■■□□□ 1.96
SLC27A1-209ENST00000600297 RCSD1Q6JBY9 416 aa27.28■■□□□ 1.96
SLC27A1-209ENST00000600297 SAMD1Q6SPF0 538 aaPredicted RBP27.28■■□□□ 1.96
SLC27A1-209ENST00000600297 FAM160B2Q86V87 743 aa27.28■■□□□ 1.96
SLC27A1-209ENST00000600297 CHURC1Q8WUH1 139 aa27.28■■□□□ 1.96
SLC27A1-209ENST00000600297 DCAF4Q8WV16 495 aa27.28■■□□□ 1.96
SLC27A1-209ENST00000600297 HTATIP2Q9BUP3 242 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms