RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 FMNL1O95466 1100 aaPredicted RBP19.16■□□□□ 0.66
LSM4-206ENST00000600289 TTLL1O95922 423 aa19.16■□□□□ 0.66
LSM4-206ENST00000600289 GJA8P48165 433 aa19.16■□□□□ 0.66
LSM4-206ENST00000600289 COG2Q14746 738 aa19.16■□□□□ 0.66
LSM4-206ENST00000600289 AKNAD1Q5T1N1 836 aa19.16■□□□□ 0.66
LSM4-206ENST00000600289 DEFB123Q8N688 67 aa19.16■□□□□ 0.66
LSM4-206ENST00000600289 GPRC5AQ8NFJ5 357 aa19.16■□□□□ 0.66
LSM4-206ENST00000600289 TXNRD2Q9NNW7 524 aa19.16■□□□□ 0.66
LSM4-206ENST00000600289 CTNNA3Q9UI47 895 aa19.16■□□□□ 0.66
LSM4-206ENST00000600289 TSPY2A6NKD2 308 aa19.15■□□□□ 0.66
LSM4-206ENST00000600289 ERVK-9P63128 1117 aa19.15■□□□□ 0.66
LSM4-206ENST00000600289 ERVK-24P63145 666 aa19.15■□□□□ 0.66
LSM4-206ENST00000600289 ATP2B2Q01814 1243 aa19.15■□□□□ 0.66
LSM4-206ENST00000600289 FAM47AQ5JRC9 791 aa19.15■□□□□ 0.66
LSM4-206ENST00000600289 GMCL1P1Q8NEA9 526 aa19.15■□□□□ 0.66
LSM4-206ENST00000600289 RNF41Q9H4P4 317 aaPredicted RBP19.15■□□□□ 0.66
LSM4-206ENST00000600289 HOXC10Q9NYD6 342 aa19.15■□□□□ 0.66
LSM4-206ENST00000600289 ZNF213O14771 459 aa19.14■□□□□ 0.65
LSM4-206ENST00000600289 TNPO2O14787 897 aaKnown RBP19.14■□□□□ 0.65
LSM4-206ENST00000600289 SGSM2O43147 1006 aa19.14■□□□□ 0.65
LSM4-206ENST00000600289 CNMDO75829 334 aa19.14■□□□□ 0.65
LSM4-206ENST00000600289 TBC1D10CQ8IV04 446 aa19.14■□□□□ 0.65
LSM4-206ENST00000600289 NKX2-3Q8TAU0 364 aa19.14■□□□□ 0.65
LSM4-206ENST00000600289 TANGO6Q9C0B7 1094 aa19.14■□□□□ 0.65
LSM4-206ENST00000600289 TCP11L1Q9NUJ3 509 aa19.14■□□□□ 0.65
LSM4-206ENST00000600289 CLIP2Q9UDT6 1046 aa19.14■□□□□ 0.65
LSM4-206ENST00000600289 F5H6K3 240 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 DSG3P32926 999 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 HAND2P61296 217 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 KLRC3Q07444 240 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 IRF5Q13568 498 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 MFSD6Q6ZSS7 791 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 SPICE1Q8N0Z3 855 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 MB21D1Q8N884 522 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 COA7Q96BR5 231 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 INCENPQ9NQS7 918 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 IL17RBQ9NRM6 502 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 MTMR10Q9NXD2 777 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
LSM4-206ENST00000600289 LAMA2P24043 3122 aaKnown RBP19.13■□□□□ 0.65
LSM4-206ENST00000600289 RANBP6O60518 1105 aaKnown RBP19.12■□□□□ 0.65
LSM4-206ENST00000600289 NDUFB10O96000 172 aa19.12■□□□□ 0.65
LSM4-206ENST00000600289 GJB1P08034 283 aa19.12■□□□□ 0.65
LSM4-206ENST00000600289 MAPK4P31152 587 aa19.12■□□□□ 0.65
LSM4-206ENST00000600289 CCNA1P78396 465 aa19.12■□□□□ 0.65
LSM4-206ENST00000600289 PRKCZQ05513 592 aa19.12■□□□□ 0.65
LSM4-206ENST00000600289 IMMTQ16891 758 aaKnown RBP19.12■□□□□ 0.65
LSM4-206ENST00000600289 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.12■□□□□ 0.65
LSM4-206ENST00000600289 PRUNE2Q8WUY3 3088 aa19.11■□□□□ 0.65
LSM4-206ENST00000600289 FLOT1O75955 427 aa19.11■□□□□ 0.65
LSM4-206ENST00000600289 Q3C1V9 767 aa19.11■□□□□ 0.65
LSM4-206ENST00000600289 PAGR1Q9BTK6 254 aa19.11■□□□□ 0.65
LSM4-206ENST00000600289 PPP4R2Q9NY27 417 aa19.11■□□□□ 0.65
LSM4-206ENST00000600289 BTBD7Q9P203 1132 aa19.11■□□□□ 0.65
LSM4-206ENST00000600289 ZNFX1Q9P2E3 1918 aaKnown RBP19.1■□□□□ 0.65
LSM4-206ENST00000600289 NEDD4P46934 1319 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 FARP2O94887 1054 aaPredicted RBP19.1■□□□□ 0.65
LSM4-206ENST00000600289 CCL5P13501 91 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 FAM83BQ5T0W9 1011 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 SKAP1Q86WV1 359 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 SLAIN1Q8ND83 568 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 RAET1EQ8TD07 263 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 PXYLP1Q8TE99 480 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 ESR2Q92731 530 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 GMCL1Q96IK5 515 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 PPP1R9AQ9ULJ8 1098 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 GABRQQ9UN88 632 aa19.1■□□□□ 0.65
LSM4-206ENST00000600289 PEX10O60683 326 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 FLT3LGP49771 235 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 LRRC47Q8N1G4 583 aaKnown RBP19.09■□□□□ 0.65
LSM4-206ENST00000600289 SHCBP1Q8NEM2 672 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 SOCS4Q8WXH5 440 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 ATG4CQ96DT6 458 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 TTC14Q96N46 770 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 GDF15Q99988 308 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 PORCNQ9H237 461 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 CNNM2Q9H8M5 875 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 TOMM22Q9NS69 142 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 GJD2Q9UKL4 321 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 STX8Q9UNK0 236 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 U3KPZ7 1027 aaPredicted RBP19.09■□□□□ 0.65
LSM4-206ENST00000600289 PLXNA1Q9UIW2 1896 aa19.09■□□□□ 0.65
LSM4-206ENST00000600289 MUC3AQ02505 3323 aa19.08■□□□□ 0.65
LSM4-206ENST00000600289 NMT2O60551 498 aa19.08■□□□□ 0.64
LSM4-206ENST00000600289 ECM2O94769 699 aaPredicted RBP19.08■□□□□ 0.64
LSM4-206ENST00000600289 BMP8BP34820 402 aa19.08■□□□□ 0.64
LSM4-206ENST00000600289 PTH1RQ03431 593 aa19.08■□□□□ 0.64
LSM4-206ENST00000600289 RRP12Q5JTH9 1297 aaKnown RBP19.08■□□□□ 0.64
LSM4-206ENST00000600289 SLFN13Q68D06 897 aa19.08■□□□□ 0.64
LSM4-206ENST00000600289 MAP4K1Q92918 833 aa19.08■□□□□ 0.64
LSM4-206ENST00000600289 ESYT1Q9BSJ8 1104 aa19.08■□□□□ 0.64
LSM4-206ENST00000600289 SPATC1LQ9H0A9 340 aa19.08■□□□□ 0.64
LSM4-206ENST00000600289 EVI5O60447 810 aa19.07■□□□□ 0.64
LSM4-206ENST00000600289 PLA2G6O60733 806 aa19.07■□□□□ 0.64
LSM4-206ENST00000600289 TOP1P11387 765 aaKnown RBP19.07■□□□□ 0.64
LSM4-206ENST00000600289 BMP3P12645 472 aa19.07■□□□□ 0.64
LSM4-206ENST00000600289 GRK4P32298 578 aa19.07■□□□□ 0.64
LSM4-206ENST00000600289 CCDC178Q5BJE1 867 aa19.07■□□□□ 0.64
LSM4-206ENST00000600289 GPR142Q7Z601 462 aa19.07■□□□□ 0.64
LSM4-206ENST00000600289 PRPF38AQ8NAV1 312 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms