RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TMEM132BQ14DG7 1078 aa20.67■□□□□ 0.9
SMG9-210ENST00000600097 SNX17Q15036 470 aa20.67■□□□□ 0.9
SMG9-210ENST00000600097 PRAMEF19Q5SWL8 479 aa20.67■□□□□ 0.9
SMG9-210ENST00000600097 ZSCAN25Q6NSZ9 544 aa20.67■□□□□ 0.9
SMG9-210ENST00000600097 SAMD1Q6SPF0 538 aaPredicted RBP20.67■□□□□ 0.9
SMG9-210ENST00000600097 GOPCQ9HD26 462 aa20.67■□□□□ 0.9
SMG9-210ENST00000600097 COG6Q9Y2V7 657 aa20.67■□□□□ 0.9
SMG9-210ENST00000600097 CYP2D7A0A087X1C5 515 aa20.66■□□□□ 0.9
SMG9-210ENST00000600097 EEF2P13639 858 aaKnown RBP20.66■□□□□ 0.9
SMG9-210ENST00000600097 COPB2P35606 906 aa20.66■□□□□ 0.9
SMG9-210ENST00000600097 LRRC41Q15345 812 aa20.66■□□□□ 0.9
SMG9-210ENST00000600097 SLFNL1Q499Z3 407 aa20.66■□□□□ 0.9
SMG9-210ENST00000600097 C1orf53Q5VUE5 145 aa20.66■□□□□ 0.9
SMG9-210ENST00000600097 RIOX2Q8IUF8 465 aa20.66■□□□□ 0.9
SMG9-210ENST00000600097 MMP19Q99542 508 aa20.66■□□□□ 0.9
SMG9-210ENST00000600097 DIS3Q9Y2L1 958 aaKnown RBP20.66■□□□□ 0.9
SMG9-210ENST00000600097 SLC4A4Q9Y6R1 1079 aa20.66■□□□□ 0.9
SMG9-210ENST00000600097 ADCYAP1R1P41586 468 aa20.65■□□□□ 0.9
SMG9-210ENST00000600097 KCTD2Q14681 263 aa20.65■□□□□ 0.9
SMG9-210ENST00000600097 TRIM60Q495X7 471 aa20.65■□□□□ 0.9
SMG9-210ENST00000600097 FAM47AQ5JRC9 791 aa20.65■□□□□ 0.9
SMG9-210ENST00000600097 PRDM5Q9NQX1 630 aaPredicted RBP20.65■□□□□ 0.9
SMG9-210ENST00000600097 CUL9Q8IWT3 2517 aa20.64■□□□□ 0.9
SMG9-210ENST00000600097 VWA5AO00534 786 aa20.64■□□□□ 0.89
SMG9-210ENST00000600097 RARBP10826 455 aa20.64■□□□□ 0.89
SMG9-210ENST00000600097 STAT3P40763 770 aa20.64■□□□□ 0.89
SMG9-210ENST00000600097 ZNF697Q5TEC3 545 aa20.64■□□□□ 0.89
SMG9-210ENST00000600097 CTR9Q6PD62 1173 aa20.64■□□□□ 0.89
SMG9-210ENST00000600097 TINF2Q9BSI4 451 aa20.64■□□□□ 0.89
SMG9-210ENST00000600097 ARPP21Q9UBL0 812 aaPredicted RBP20.64■□□□□ 0.89
SMG9-210ENST00000600097 PPP1R9AQ9ULJ8 1098 aa20.64■□□□□ 0.89
SMG9-210ENST00000600097 SMIM22K7EJ46 135 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 RNF180Q86T96 592 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 FERMT2Q96AC1 680 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 GUCD1Q96NT3 240 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 XPNPEP3Q9NQH7 507 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 PDLIM7Q9NR12 457 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 FBXO28Q9NVF7 368 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 PHF24Q9UPV7 400 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 MYH8P13535 1937 aa20.63■□□□□ 0.89
SMG9-210ENST00000600097 PGK2P07205 417 aa20.62■□□□□ 0.89
SMG9-210ENST00000600097 SHHQ15465 462 aa20.62■□□□□ 0.89
SMG9-210ENST00000600097 ZNF792Q3KQV3 632 aa20.62■□□□□ 0.89
SMG9-210ENST00000600097 BADQ92934 168 aa20.62■□□□□ 0.89
SMG9-210ENST00000600097 LRRCC1Q9C099 1032 aa20.62■□□□□ 0.89
SMG9-210ENST00000600097 PUS7LQ9H0K6 701 aaKnown RBP20.62■□□□□ 0.89
SMG9-210ENST00000600097 ZNF214Q9UL59 606 aaPredicted RBP20.62■□□□□ 0.89
SMG9-210ENST00000600097 ROBO3Q96MS0 1386 aa20.61■□□□□ 0.89
SMG9-210ENST00000600097 RAD21O60216 631 aa20.61■□□□□ 0.89
SMG9-210ENST00000600097 CHGBP05060 677 aa20.61■□□□□ 0.89
SMG9-210ENST00000600097 FAM83BQ5T0W9 1011 aa20.61■□□□□ 0.89
SMG9-210ENST00000600097 TACC3Q9Y6A5 838 aa20.61■□□□□ 0.89
SMG9-210ENST00000600097 BAZ2AQ9UIF9 1905 aaKnown RBP20.61■□□□□ 0.89
SMG9-210ENST00000600097 LTBP2Q14767 1821 aa20.6■□□□□ 0.89
SMG9-210ENST00000600097 AKR1A1P14550 325 aa20.6■□□□□ 0.89
SMG9-210ENST00000600097 TLE2Q04725 743 aa20.6■□□□□ 0.89
SMG9-210ENST00000600097 C9orf50Q5SZB4 431 aa20.6■□□□□ 0.89
SMG9-210ENST00000600097 MSL3Q8N5Y2 521 aaKnown RBP20.6■□□□□ 0.89
SMG9-210ENST00000600097 REPS2Q8NFH8 660 aa20.6■□□□□ 0.89
SMG9-210ENST00000600097 FAM161BQ96MY7 647 aa20.6■□□□□ 0.89
SMG9-210ENST00000600097 CNPY2Q9Y2B0 182 aa20.6■□□□□ 0.89
SMG9-210ENST00000600097 LAMA2P24043 3122 aaKnown RBP20.6■□□□□ 0.89
SMG9-210ENST00000600097 TRIM43BA6NCK2 446 aa20.59■□□□□ 0.89
SMG9-210ENST00000600097 SBK1Q52WX2 424 aa20.59■□□□□ 0.89
SMG9-210ENST00000600097 GIMAP6Q6P9H5 292 aa20.59■□□□□ 0.89
SMG9-210ENST00000600097 SH3RF1Q7Z6J0 888 aa20.59■□□□□ 0.89
SMG9-210ENST00000600097 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.59■□□□□ 0.89
SMG9-210ENST00000600097 TRIM43Q96BQ3 446 aaPredicted RBP20.59■□□□□ 0.89
SMG9-210ENST00000600097 STRBPQ96SI9 672 aaKnown RBP20.59■□□□□ 0.89
SMG9-210ENST00000600097 SLF1Q9BQI6 1058 aa20.59■□□□□ 0.89
SMG9-210ENST00000600097 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.59■□□□□ 0.89
SMG9-210ENST00000600097 TEX13BQ9BXU2 312 aa20.59■□□□□ 0.89
SMG9-210ENST00000600097 NYAP2Q9P242 653 aa20.59■□□□□ 0.89
SMG9-210ENST00000600097 PARP14Q460N5 1801 aa20.58■□□□□ 0.89
SMG9-210ENST00000600097 PGK1P00558 417 aa20.58■□□□□ 0.89
SMG9-210ENST00000600097 CLTBP09497 229 aa20.58■□□□□ 0.89
SMG9-210ENST00000600097 ZNF865P0CJ78 1059 aaPredicted RBP20.58■□□□□ 0.89
SMG9-210ENST00000600097 SMAD3P84022 425 aaKnown RBP20.58■□□□□ 0.89
SMG9-210ENST00000600097 MKNK2Q9HBH9 465 aa20.58■□□□□ 0.89
SMG9-210ENST00000600097 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.89
SMG9-210ENST00000600097 TAL1P17542 331 aaPredicted RBP20.57■□□□□ 0.88
SMG9-210ENST00000600097 RASA1P20936 1047 aa20.57■□□□□ 0.88
SMG9-210ENST00000600097 PRPF38AQ8NAV1 312 aaKnown RBP20.57■□□□□ 0.88
SMG9-210ENST00000600097 DDX11Q96FC9 970 aa20.57■□□□□ 0.88
SMG9-210ENST00000600097 TSEN34Q9BSV6 310 aaKnown RBP20.57■□□□□ 0.88
SMG9-210ENST00000600097 A0A1W2PQ45 241 aaPredicted RBP20.56■□□□□ 0.88
SMG9-210ENST00000600097 A0A1W2PQY0 241 aa20.56■□□□□ 0.88
SMG9-210ENST00000600097 GSG1L2A8MUP6 293 aa20.56■□□□□ 0.88
SMG9-210ENST00000600097 F5H6K3 240 aa20.56■□□□□ 0.88
SMG9-210ENST00000600097 KLRC3Q07444 240 aa20.56■□□□□ 0.88
SMG9-210ENST00000600097 SNRNP48Q6IEG0 339 aaKnown RBP20.56■□□□□ 0.88
SMG9-210ENST00000600097 KBTBD3Q8NAB2 608 aa20.56■□□□□ 0.88
SMG9-210ENST00000600097 CDX2Q99626 313 aaPredicted RBP20.56■□□□□ 0.88
SMG9-210ENST00000600097 SEMA6BQ9H3T3 888 aa20.56■□□□□ 0.88
SMG9-210ENST00000600097 ZNF287Q9HBT7 754 aa20.56■□□□□ 0.88
SMG9-210ENST00000600097 ZNFX1Q9P2E3 1918 aaKnown RBP20.56■□□□□ 0.88
SMG9-210ENST00000600097 SYNGAP1Q96PV0 1343 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 ATP2A1O14983 1001 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 KIAA0355O15063 1070 aa20.55■□□□□ 0.88
SMG9-210ENST00000600097 ADAMTS4O75173 837 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms