RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 SYNPO2Q9UMS6 1093 aa17.95■□□□□ 0.46
LIG1-219ENST00000600055 MTMR7Q9Y216 660 aa17.95■□□□□ 0.46
LIG1-219ENST00000600055 LAMA4Q16363 1823 aa17.95■□□□□ 0.46
LIG1-219ENST00000600055 MYPNQ86TC9 1320 aa17.95■□□□□ 0.46
LIG1-219ENST00000600055 MCCP23508 829 aa17.94■□□□□ 0.46
LIG1-219ENST00000600055 HOXD10P28358 340 aa17.94■□□□□ 0.46
LIG1-219ENST00000600055 RCSD1Q6JBY9 416 aa17.94■□□□□ 0.46
LIG1-219ENST00000600055 TMEM47Q9BQJ4 181 aa17.94■□□□□ 0.46
LIG1-219ENST00000600055 ZSWIM5Q9P217 1185 aa17.94■□□□□ 0.46
LIG1-219ENST00000600055 CCDC85CA6NKD9 419 aa17.93■□□□□ 0.46
LIG1-219ENST00000600055 CASC1Q6TDU7 716 aa17.93■□□□□ 0.46
LIG1-219ENST00000600055 STOX1Q6ZVD7 989 aa17.93■□□□□ 0.46
LIG1-219ENST00000600055 CYB5R4Q7L1T6 521 aa17.93■□□□□ 0.46
LIG1-219ENST00000600055 KRT23Q9C075 422 aa17.93■□□□□ 0.46
LIG1-219ENST00000600055 PPP1R9AQ9ULJ8 1098 aa17.93■□□□□ 0.46
LIG1-219ENST00000600055 RLFQ13129 1914 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 E7EWF7 191 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 TOP1P11387 765 aaKnown RBP17.92■□□□□ 0.46
LIG1-219ENST00000600055 BMP3P12645 472 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 FLT3LGP49771 235 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 PRMT2P55345 433 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 COA7Q96BR5 231 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 SLF1Q9BQI6 1058 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 CNNM2Q9H8M5 875 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 ISY1Q9ULR0 285 aaKnown RBP17.92■□□□□ 0.46
LIG1-219ENST00000600055 ADAMTS5Q9UNA0 930 aa17.92■□□□□ 0.46
LIG1-219ENST00000600055 TMEM232C9JQI7 657 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 VWA5AO00534 786 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 SLC1A4P43007 532 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 PLS1Q14651 629 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 TMEM132BQ14DG7 1078 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 KCTD1Q719H9 257 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 CCAR1Q8IX12 1150 aaKnown RBP17.91■□□□□ 0.46
LIG1-219ENST00000600055 RAET1EQ8TD07 263 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 SH3TC2Q8TF17 1288 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 KIFC2Q96AC6 838 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 GMCL1Q96IK5 515 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 TTC14Q96N46 770 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 ZSCAN10Q96SZ4 725 aaPredicted RBP17.91■□□□□ 0.46
LIG1-219ENST00000600055 MOV10L1Q9BXT6 1211 aaKnown RBP17.91■□□□□ 0.46
LIG1-219ENST00000600055 SPATC1LQ9H0A9 340 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 GJD2Q9UKL4 321 aa17.91■□□□□ 0.46
LIG1-219ENST00000600055 SLC27A2O14975 620 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 MAPK4P31152 587 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 CCNA1P78396 465 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 NECTIN1Q15223 517 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 WDR78Q5VTH9 848 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 CREB3L3Q68CJ9 461 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 GPR142Q7Z601 462 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 IQCA1Q86XH1 822 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 DGKHQ86XP1 1220 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 MB21D1Q8N884 522 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 REPS2Q8NFH8 660 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 FEM1BQ9UK73 627 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 MGAMO43451 1857 aa17.9■□□□□ 0.46
LIG1-219ENST00000600055 HTTP42858 3142 aa17.89■□□□□ 0.46
LIG1-219ENST00000600055 NT5C2P49902 561 aa17.89■□□□□ 0.45
LIG1-219ENST00000600055 TRDNQ13061 729 aa17.89■□□□□ 0.45
LIG1-219ENST00000600055 CCDC96Q2M329 555 aa17.89■□□□□ 0.45
LIG1-219ENST00000600055 SLC9C1Q4G0N8 1177 aa17.89■□□□□ 0.45
LIG1-219ENST00000600055 PLEKHH3Q7Z736 793 aa17.89■□□□□ 0.45
LIG1-219ENST00000600055 ENAHQ8N8S7 591 aaPredicted RBP17.89■□□□□ 0.45
LIG1-219ENST00000600055 PRPF38AQ8NAV1 312 aaKnown RBP17.89■□□□□ 0.45
LIG1-219ENST00000600055 TNKSO95271 1327 aa17.89■□□□□ 0.45
LIG1-219ENST00000600055 MYCP01106 439 aaPredicted RBP17.88■□□□□ 0.45
LIG1-219ENST00000600055 ERCC3P19447 782 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 COL9A3Q14050 684 aaPredicted RBP17.88■□□□□ 0.45
LIG1-219ENST00000600055 CCDC178Q5BJE1 867 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 TTBK2Q6IQ55 1244 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 CHST3Q7LGC8 479 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 RALYLQ86SE5 291 aaKnown RBP17.88■□□□□ 0.45
LIG1-219ENST00000600055 NCOA7Q8NI08 942 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 DCAF4Q8WV16 495 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 ANKS1AQ92625 1134 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 ARMC5Q96C12 935 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 UBAC1Q9BSL1 405 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 CWC22Q9HCG8 908 aaKnown RBP17.88■□□□□ 0.45
LIG1-219ENST00000600055 A0A0G2JMZ2 1700 aa17.88■□□□□ 0.45
LIG1-219ENST00000600055 FRMPD2Q68DX3 1309 aaPredicted RBP17.88■□□□□ 0.45
LIG1-219ENST00000600055 PARP14Q460N5 1801 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 ADCY3O60266 1144 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 PDHBP11177 359 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 ELNP15502 786 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 CYP2B6P20813 491 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 GRK4P32298 578 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 STAT2P52630 851 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 IKQ13123 557 aaPredicted RBP17.87■□□□□ 0.45
LIG1-219ENST00000600055 IRF5Q13568 498 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 SEC23AQ15436 765 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 MORN1Q5T089 497 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 NCAPG2Q86XI2 1143 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 MB21D2Q8IYB1 491 aaPredicted RBP17.87■□□□□ 0.45
LIG1-219ENST00000600055 KAT14Q9H8E8 782 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 GPCPD1Q9NPB8 672 aa17.87■□□□□ 0.45
LIG1-219ENST00000600055 ZNF214Q9UL59 606 aaPredicted RBP17.87■□□□□ 0.45
LIG1-219ENST00000600055 ZBED4O75132 1171 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 PTPREP23469 700 aa17.86■□□□□ 0.45
LIG1-219ENST00000600055 SLC16A2P36021 539 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms