RNA–Protein interactions for RNA: ENST00000599464.1

PRKD2-213, Transcript of protein kinase D2, human

TSL 2

Gene PRKD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-213	ENST00000599464	TTLL1	O95922	423 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	FCER1A	P12319	257 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	COPB2	P35606	906 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	SLC4A3	P48751	1232 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	PDE1A	P54750	535 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	KCTD2	Q14681	263 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	PPP4R3B	Q5MIZ7	849 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	CCDC129	Q6ZRS4	1044 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	UBE2Q1	Q7Z7E8	422 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	RILPL2	Q969X0	211 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	LNPK	Q9C0E8	428 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	TOMM22	Q9NS69	142 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	OGDHL	Q9ULD0	1010 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	PPP1R9A	Q9ULJ8	1098 aa		11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	COLQ	Q9Y215	455 aa	Predicted RBP	11.18	□□□□□ -0.62
PRKD2-213	ENST00000599464	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	TSPY2	A6NKD2	308 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464		F5H6K3	240 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	HOXC6	P09630	235 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	CYP2C19	P33261	490 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	TFAP4	Q01664	338 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	KLRC3	Q07444	240 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	IK	Q13123	557 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	TMEM132B	Q14DG7	1078 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	ABRA	Q8N0Z2	381 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	NPLOC4	Q8TAT6	608 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	MMP19	Q99542	508 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	NUP88	Q99567	741 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	SLF1	Q9BQI6	1058 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	HELLS	Q9NRZ9	838 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	FBXO28	Q9NVF7	368 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	FLRT1	Q9NZU1	646 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	STAP2	Q9UGK3	403 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	MYH8	P13535	1937 aa		11.17	□□□□□ -0.62
PRKD2-213	ENST00000599464	SALL3	Q9BXA9	1300 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	VWA5A	O00534	786 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	ZBED4	O75132	1171 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	MYCN	P04198	464 aa	Predicted RBP	11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	STAT3	P40763	770 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	FAM47A	Q5JRC9	791 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	OLFML2B	Q68BL8	750 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	RIOX2	Q8IUF8	465 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	C7orf61	Q8IZ16	206 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	LRRC47	Q8N1G4	583 aa	Known RBP	11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	EXOC6	Q8TAG9	804 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	KIFC2	Q96AC6	838 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	CEP95	Q96GE4	821 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	MTMR4	Q9NYA4	1195 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	DDX20	Q9UHI6	824 aa	Known RBP	11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	STX8	Q9UNK0	236 aa		11.16	□□□□□ -0.62
PRKD2-213	ENST00000599464	PLXNB2	O15031	1838 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	RANBP6	O60518	1105 aa	Known RBP	11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	NDUFB10	O96000	172 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	MFAP1	P55081	439 aa	Known RBP	11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	CTDSPL2	Q05D32	466 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	MCMDC2	Q4G0Z9	681 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	SNRNP48	Q6IEG0	339 aa	Known RBP	11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	CHD1L	Q86WJ1	897 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	CPXCR1	Q8N123	301 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	PRPF38A	Q8NAV1	312 aa	Known RBP	11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	NEDD1	Q8NHV4	660 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	TEX13B	Q9BXU2	312 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	FEM1B	Q9UK73	627 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	SYNPO2	Q9UMS6	1093 aa		11.15	□□□□□ -0.62
PRKD2-213	ENST00000599464	IGKV6D-41	A0A0C4DH26	115 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	BMP3	P12645	472 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	SLFN13	Q68D06	897 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	GMCL1P1	Q8NEA9	526 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	DDX11	Q96FC9	970 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	MAML3	Q96JK9	1138 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	FAM227B	Q96M60	508 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	DIAPH3	Q9NSV4	1193 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	MTMR7	Q9Y216	660 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464		A0A0G2JMZ2	1700 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464	PLIN4	Q96Q06	1357 aa		11.14	□□□□□ -0.63
PRKD2-213	ENST00000599464		A0A0D9SFI3	127 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	TMEM232	C9JQI7	657 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	KBTBD13	C9JR72	458 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	COBL	O75128	1261 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	PGK2	P07205	417 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	CYBA	P13498	195 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	SLC1A4	P43007	532 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	STAT2	P52630	851 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	NMI	Q13287	307 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	RRP12	Q5JTH9	1297 aa	Known RBP	11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	VPS53	Q5VIR6	699 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	LHX8	Q68G74	356 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	TICAM2	Q86XR7	235 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	SMC5	Q8IY18	1101 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	ARRDC4	Q8NCT1	418 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	MKL1	Q969V6	931 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	CHMP4C	Q96CF2	233 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	FBXO40	Q9UH90	709 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	ZNF214	Q9UL59	606 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	ADAMTS5	Q9UNA0	930 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	CNPY2	Q9Y2B0	182 aa		11.13	□□□□□ -0.63
PRKD2-213	ENST00000599464	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms