RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 FAM109BQ6ICB4 259 aaPredicted RBP25.46■■□□□ 1.67
PNKP-212ENST00000599454 CLEC10AQ8IUN9 316 aa25.46■■□□□ 1.67
PNKP-212ENST00000599454 MAML3Q96JK9 1138 aa25.46■■□□□ 1.67
PNKP-212ENST00000599454 BCL11AQ9H165 835 aa25.46■■□□□ 1.67
PNKP-212ENST00000599454 KANSL2Q9H9L4 492 aa25.46■■□□□ 1.67
PNKP-212ENST00000599454 ADAMTS5Q9UNA0 930 aa25.46■■□□□ 1.67
PNKP-212ENST00000599454 SNX17Q15036 470 aa25.45■■□□□ 1.66
PNKP-212ENST00000599454 SLC39A5Q6ZMH5 540 aa25.45■■□□□ 1.66
PNKP-212ENST00000599454 COPB2P35606 906 aa25.44■■□□□ 1.66
PNKP-212ENST00000599454 TMEM132BQ14DG7 1078 aa25.44■■□□□ 1.66
PNKP-212ENST00000599454 SLFNL1Q499Z3 407 aa25.44■■□□□ 1.66
PNKP-212ENST00000599454 GOPCQ9HD26 462 aa25.44■■□□□ 1.66
PNKP-212ENST00000599454 ATP11BQ9Y2G3 1177 aa25.44■■□□□ 1.66
PNKP-212ENST00000599454 SLC4A4Q9Y6R1 1079 aa25.44■■□□□ 1.66
PNKP-212ENST00000599454 MYH4Q9Y623 1939 aa25.43■■□□□ 1.66
PNKP-212ENST00000599454 CYP2D7A0A087X1C5 515 aa25.43■■□□□ 1.66
PNKP-212ENST00000599454 EEF2P13639 858 aaKnown RBP25.43■■□□□ 1.66
PNKP-212ENST00000599454 RIOX2Q8IUF8 465 aa25.43■■□□□ 1.66
PNKP-212ENST00000599454 MMP19Q99542 508 aa25.43■■□□□ 1.66
PNKP-212ENST00000599454 DIS3Q9Y2L1 958 aaKnown RBP25.43■■□□□ 1.66
PNKP-212ENST00000599454 POTEB2H3BUK9 544 aa25.42■■□□□ 1.66
PNKP-212ENST00000599454 C1orf53Q5VUE5 145 aa25.42■■□□□ 1.66
PNKP-212ENST00000599454 ANO1Q5XXA6 986 aa25.42■■□□□ 1.66
PNKP-212ENST00000599454 ARPP21Q9UBL0 812 aaPredicted RBP25.42■■□□□ 1.66
PNKP-212ENST00000599454 KCTD2Q14681 263 aa25.41■■□□□ 1.66
PNKP-212ENST00000599454 LRRC41Q15345 812 aa25.41■■□□□ 1.66
PNKP-212ENST00000599454 PRAMEF19Q5SWL8 479 aa25.41■■□□□ 1.66
PNKP-212ENST00000599454 DIEXFQ68CQ4 756 aaKnown RBP25.41■■□□□ 1.66
PNKP-212ENST00000599454 CTR9Q6PD62 1173 aa25.41■■□□□ 1.66
PNKP-212ENST00000599454 SAMD1Q6SPF0 538 aaPredicted RBP25.41■■□□□ 1.66
PNKP-212ENST00000599454 LRRCC1Q9C099 1032 aa25.41■■□□□ 1.66
PNKP-212ENST00000599454 PPP1R9AQ9ULJ8 1098 aa25.41■■□□□ 1.66
PNKP-212ENST00000599454 ROBO3Q96MS0 1386 aa25.41■■□□□ 1.66
PNKP-212ENST00000599454 SMIM22K7EJ46 135 aa25.4■■□□□ 1.66
PNKP-212ENST00000599454 VWA5AO00534 786 aa25.4■■□□□ 1.66
PNKP-212ENST00000599454 MYCNP04198 464 aaPredicted RBP25.39■■□□□ 1.66
PNKP-212ENST00000599454 RARBP10826 455 aa25.39■■□□□ 1.66
PNKP-212ENST00000599454 STAT3P40763 770 aa25.39■■□□□ 1.66
PNKP-212ENST00000599454 ADCYAP1R1P41586 468 aa25.39■■□□□ 1.66
PNKP-212ENST00000599454 TRIM60Q495X7 471 aa25.39■■□□□ 1.66
PNKP-212ENST00000599454 FAM47AQ5JRC9 791 aa25.39■■□□□ 1.66
PNKP-212ENST00000599454 TINF2Q9BSI4 451 aa25.39■■□□□ 1.66
PNKP-212ENST00000599454 PUS7LQ9H0K6 701 aaKnown RBP25.39■■□□□ 1.66
PNKP-212ENST00000599454 FBXO28Q9NVF7 368 aa25.39■■□□□ 1.66
PNKP-212ENST00000599454 CHGBP05060 677 aa25.38■■□□□ 1.65
PNKP-212ENST00000599454 SBK1Q52WX2 424 aa25.38■■□□□ 1.65
PNKP-212ENST00000599454 XPNPEP3Q9NQH7 507 aa25.38■■□□□ 1.65
PNKP-212ENST00000599454 PRDM5Q9NQX1 630 aaPredicted RBP25.38■■□□□ 1.65
PNKP-212ENST00000599454 ZNF214Q9UL59 606 aaPredicted RBP25.38■■□□□ 1.65
PNKP-212ENST00000599454 PHF24Q9UPV7 400 aa25.38■■□□□ 1.65
PNKP-212ENST00000599454 ZNF792Q3KQV3 632 aa25.37■■□□□ 1.65
PNKP-212ENST00000599454 FAM83BQ5T0W9 1011 aa25.37■■□□□ 1.65
PNKP-212ENST00000599454 GIMAP6Q6P9H5 292 aa25.37■■□□□ 1.65
PNKP-212ENST00000599454 RNF180Q86T96 592 aa25.37■■□□□ 1.65
PNKP-212ENST00000599454 REPS2Q8NFH8 660 aa25.37■■□□□ 1.65
PNKP-212ENST00000599454 PDLIM7Q9NR12 457 aa25.37■■□□□ 1.65
PNKP-212ENST00000599454 ZNF697Q5TEC3 545 aa25.36■■□□□ 1.65
PNKP-212ENST00000599454 MSL3Q8N5Y2 521 aaKnown RBP25.36■■□□□ 1.65
PNKP-212ENST00000599454 FERMT2Q96AC1 680 aa25.36■■□□□ 1.65
PNKP-212ENST00000599454 STRBPQ96SI9 672 aaKnown RBP25.36■■□□□ 1.65
PNKP-212ENST00000599454 ECHDC1Q9NTX5 307 aa25.36■■□□□ 1.65
PNKP-212ENST00000599454 MCM3APO60318 1980 aa25.35■■□□□ 1.65
PNKP-212ENST00000599454 RAD21O60216 631 aa25.35■■□□□ 1.65
PNKP-212ENST00000599454 PGK2P07205 417 aa25.35■■□□□ 1.65
PNKP-212ENST00000599454 GUCD1Q96NT3 240 aa25.35■■□□□ 1.65
PNKP-212ENST00000599454 SLF1Q9BQI6 1058 aa25.35■■□□□ 1.65
PNKP-212ENST00000599454 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.35■■□□□ 1.65
PNKP-212ENST00000599454 NYAP2Q9P242 653 aa25.35■■□□□ 1.65
PNKP-212ENST00000599454 RCAN3Q9UKA8 241 aa25.35■■□□□ 1.65
PNKP-212ENST00000599454 AKR1A1P14550 325 aa25.34■■□□□ 1.65
PNKP-212ENST00000599454 SHHQ15465 462 aa25.34■■□□□ 1.65
PNKP-212ENST00000599454 BADQ92934 168 aa25.34■■□□□ 1.65
PNKP-212ENST00000599454 TEX13BQ9BXU2 312 aa25.34■■□□□ 1.65
PNKP-212ENST00000599454 MKNK2Q9HBH9 465 aa25.34■■□□□ 1.65
PNKP-212ENST00000599454 KBTBD3Q8NAB2 608 aa25.33■■□□□ 1.65
PNKP-212ENST00000599454 GPATCH3Q96I76 525 aa25.33■■□□□ 1.65
PNKP-212ENST00000599454 CNPY2Q9Y2B0 182 aa25.33■■□□□ 1.65
PNKP-212ENST00000599454 TACC3Q9Y6A5 838 aa25.33■■□□□ 1.65
PNKP-212ENST00000599454 A0A0C4DFX4 3053 aa25.33■■□□□ 1.64
PNKP-212ENST00000599454 GSG1L2A8MUP6 293 aa25.32■■□□□ 1.64
PNKP-212ENST00000599454 ZNF865P0CJ78 1059 aaPredicted RBP25.32■■□□□ 1.64
PNKP-212ENST00000599454 RASA1P20936 1047 aa25.32■■□□□ 1.64
PNKP-212ENST00000599454 TLE2Q04725 743 aa25.32■■□□□ 1.64
PNKP-212ENST00000599454 APPBP2Q92624 585 aa25.32■■□□□ 1.64
PNKP-212ENST00000599454 TRIM43BA6NCK2 446 aa25.31■■□□□ 1.64
PNKP-212ENST00000599454 F5H6K3 240 aa25.31■■□□□ 1.64
PNKP-212ENST00000599454 SMARCA5O60264 1052 aaPredicted RBP25.31■■□□□ 1.64
PNKP-212ENST00000599454 KLRC3Q07444 240 aa25.31■■□□□ 1.64
PNKP-212ENST00000599454 C9orf50Q5SZB4 431 aa25.31■■□□□ 1.64
PNKP-212ENST00000599454 PRPF38AQ8NAV1 312 aaKnown RBP25.31■■□□□ 1.64
PNKP-212ENST00000599454 TRIM43Q96BQ3 446 aaPredicted RBP25.31■■□□□ 1.64
PNKP-212ENST00000599454 TSEN34Q9BSV6 310 aaKnown RBP25.31■■□□□ 1.64
PNKP-212ENST00000599454 ZNF287Q9HBT7 754 aa25.31■■□□□ 1.64
PNKP-212ENST00000599454 SYNGAP1Q96PV0 1343 aa25.31■■□□□ 1.64
PNKP-212ENST00000599454 MINDY4BA8MYZ0 360 aa25.3■■□□□ 1.64
PNKP-212ENST00000599454 ATP2A1O14983 1001 aa25.3■■□□□ 1.64
PNKP-212ENST00000599454 NDUFB10O96000 172 aa25.3■■□□□ 1.64
PNKP-212ENST00000599454 PGK1P00558 417 aa25.3■■□□□ 1.64
PNKP-212ENST00000599454 ZFYP08048 801 aaPredicted RBP25.3■■□□□ 1.64
PNKP-212ENST00000599454 CLTBP09497 229 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms