RNA–Protein interactions for RNA: ENST00000599097.1

HOMER3-210, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 770 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-210ENST00000599097 MMP19Q99542 508 aa20.88■□□□□ 0.93
HOMER3-210ENST00000599097 PPP1R9AQ9ULJ8 1098 aa20.88■□□□□ 0.93
HOMER3-210ENST00000599097 SYNPO2Q9UMS6 1093 aa20.88■□□□□ 0.93
HOMER3-210ENST00000599097 DIS3Q9Y2L1 958 aaKnown RBP20.88■□□□□ 0.93
HOMER3-210ENST00000599097 CTDP1Q9Y5B0 961 aaPredicted RBP20.88■□□□□ 0.93
HOMER3-210ENST00000599097 RLFQ13129 1914 aa20.87■□□□□ 0.93
HOMER3-210ENST00000599097 CLEC10AQ8IUN9 316 aa20.87■□□□□ 0.93
HOMER3-210ENST00000599097 SIAH1Q8IUQ4 282 aa20.87■□□□□ 0.93
HOMER3-210ENST00000599097 MAML3Q96JK9 1138 aa20.87■□□□□ 0.93
HOMER3-210ENST00000599097 STRBPQ96SI9 672 aaKnown RBP20.87■□□□□ 0.93
HOMER3-210ENST00000599097 NACAP1Q9BZK3 213 aa20.87■□□□□ 0.93
HOMER3-210ENST00000599097 DCTPP1Q9H773 170 aa20.87■□□□□ 0.93
HOMER3-210ENST00000599097 ADAMTS5Q9UNA0 930 aa20.87■□□□□ 0.93
HOMER3-210ENST00000599097 CYP2D7A0A087X1C5 515 aa20.86■□□□□ 0.93
HOMER3-210ENST00000599097 VWA5AO00534 786 aa20.86■□□□□ 0.93
HOMER3-210ENST00000599097 SOX1O00570 391 aaPredicted RBP20.86■□□□□ 0.93
HOMER3-210ENST00000599097 RNF113AO15541 343 aaKnown RBP20.86■□□□□ 0.93
HOMER3-210ENST00000599097 SLC3A2P08195 630 aaKnown RBP20.86■□□□□ 0.93
HOMER3-210ENST00000599097 STAT3P40763 770 aa20.86■□□□□ 0.93
HOMER3-210ENST00000599097 TDO2P48775 406 aa20.86■□□□□ 0.93
HOMER3-210ENST00000599097 TMEM132BQ14DG7 1078 aa20.86■□□□□ 0.93
HOMER3-210ENST00000599097 PPP4R3BQ5MIZ7 849 aa20.86■□□□□ 0.93
HOMER3-210ENST00000599097 LRCH3Q96II8 777 aa20.86■□□□□ 0.93
HOMER3-210ENST00000599097 NYAP2Q9P242 653 aa20.86■□□□□ 0.93
HOMER3-210ENST00000599097 TTC41PQ6P2S7 1318 aa20.85■□□□□ 0.93
HOMER3-210ENST00000599097 COBLO75128 1261 aa20.85■□□□□ 0.93
HOMER3-210ENST00000599097 RARBP10826 455 aa20.85■□□□□ 0.93
HOMER3-210ENST00000599097 KIAA1755Q5JYT7 1200 aa20.85■□□□□ 0.93
HOMER3-210ENST00000599097 MSL3Q8N5Y2 521 aaKnown RBP20.85■□□□□ 0.93
HOMER3-210ENST00000599097 SLF1Q9BQI6 1058 aa20.85■□□□□ 0.93
HOMER3-210ENST00000599097 TEX13BQ9BXU2 312 aa20.85■□□□□ 0.93
HOMER3-210ENST00000599097 ZBTB47Q9UFB7 747 aaPredicted RBP20.85■□□□□ 0.93
HOMER3-210ENST00000599097 CNPY2Q9Y2B0 182 aa20.85■□□□□ 0.93
HOMER3-210ENST00000599097 PARP14Q460N5 1801 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 SMARCA5O60264 1052 aaPredicted RBP20.84■□□□□ 0.93
HOMER3-210ENST00000599097 APPP05067 770 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 RTP1P59025 263 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 SLFNL1Q499Z3 407 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 FAM83BQ5T0W9 1011 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 RNF180Q86T96 592 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 ZNF444Q8N0Y2 327 aaPredicted RBP20.84■□□□□ 0.93
HOMER3-210ENST00000599097 DEFB123Q8N688 67 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 TRPV1Q8NER1 839 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 SZT2Q5T011 3432 aa20.84■□□□□ 0.93
HOMER3-210ENST00000599097 GSG1L2A8MUP6 293 aa20.83■□□□□ 0.93
HOMER3-210ENST00000599097 MINDY4BA8MYZ0 360 aa20.83■□□□□ 0.93
HOMER3-210ENST00000599097 ATN1P54259 1190 aaPredicted RBP20.83■□□□□ 0.93
HOMER3-210ENST00000599097 MDM2Q00987 491 aaPredicted RBP20.83■□□□□ 0.93
HOMER3-210ENST00000599097 PDE4BQ07343 736 aa20.83■□□□□ 0.93
HOMER3-210ENST00000599097 GJC2Q5T442 439 aaPredicted RBP20.83■□□□□ 0.93
HOMER3-210ENST00000599097 PRPF38AQ8NAV1 312 aaKnown RBP20.83■□□□□ 0.93
HOMER3-210ENST00000599097 TINF2Q9BSI4 451 aa20.83■□□□□ 0.93
HOMER3-210ENST00000599097 ATP11BQ9Y2G3 1177 aa20.83■□□□□ 0.93
HOMER3-210ENST00000599097 GPAA1O43292 621 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 ZBED4O75132 1171 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 MYCNP04198 464 aaPredicted RBP20.82■□□□□ 0.92
HOMER3-210ENST00000599097 FDX1P10109 184 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 RASA1P20936 1047 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 C20orf194Q5TEA3 1177 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 C1orf53Q5VUE5 145 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 SLC17A8Q8NDX2 589 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 XPNPEP3Q9NQH7 507 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 FBXO40Q9UH90 709 aa20.82■□□□□ 0.92
HOMER3-210ENST00000599097 ZNF214Q9UL59 606 aaPredicted RBP20.82■□□□□ 0.92
HOMER3-210ENST00000599097 GREB1LQ9C091 1923 aaPredicted RBP20.81■□□□□ 0.92
HOMER3-210ENST00000599097 AKR1A1P14550 325 aa20.81■□□□□ 0.92
HOMER3-210ENST00000599097 SLC39A5Q6ZMH5 540 aa20.81■□□□□ 0.92
HOMER3-210ENST00000599097 OSBP2Q969R2 916 aa20.81■□□□□ 0.92
HOMER3-210ENST00000599097 DDX11Q96FC9 970 aa20.81■□□□□ 0.92
HOMER3-210ENST00000599097 FBXO28Q9NVF7 368 aa20.81■□□□□ 0.92
HOMER3-210ENST00000599097 F5H6K3 240 aa20.8■□□□□ 0.92
HOMER3-210ENST00000599097 ATP2A1O14983 1001 aa20.8■□□□□ 0.92
HOMER3-210ENST00000599097 TTLL1O95922 423 aa20.8■□□□□ 0.92
HOMER3-210ENST00000599097 KLRC3Q07444 240 aa20.8■□□□□ 0.92
HOMER3-210ENST00000599097 SNX17Q15036 470 aa20.8■□□□□ 0.92
HOMER3-210ENST00000599097 LRRC41Q15345 812 aa20.8■□□□□ 0.92
HOMER3-210ENST00000599097 SNRNP48Q6IEG0 339 aaKnown RBP20.8■□□□□ 0.92
HOMER3-210ENST00000599097 FEM1BQ9UK73 627 aa20.8■□□□□ 0.92
HOMER3-210ENST00000599097 SYNGAP1Q96PV0 1343 aa20.79■□□□□ 0.92
HOMER3-210ENST00000599097 COL11A1P12107 1806 aaPredicted RBP20.79■□□□□ 0.92
HOMER3-210ENST00000599097 LAMA3Q16787 3333 aa20.79■□□□□ 0.92
HOMER3-210ENST00000599097 PATL2C9JE40 543 aaKnown RBP20.79■□□□□ 0.92
HOMER3-210ENST00000599097 OAZ1P54368 228 aa20.79■□□□□ 0.92
HOMER3-210ENST00000599097 ZNF792Q3KQV3 632 aa20.79■□□□□ 0.92
HOMER3-210ENST00000599097 FAM47AQ5JRC9 791 aa20.79■□□□□ 0.92
HOMER3-210ENST00000599097 PLIN4Q96Q06 1357 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 NDUFB10O96000 172 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 CHGBP05060 677 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 PGK2P07205 417 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 TSPY3P0CV98 308 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 TSPY8P0CW00 308 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 FAM109BQ6ICB4 259 aaPredicted RBP20.78■□□□□ 0.92
HOMER3-210ENST00000599097 GMCL1P1Q8NEA9 526 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 REPS2Q8NFH8 660 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 MKL1Q969V6 931 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 FSD1Q9BTV5 496 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 NAPBQ9H115 298 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 PRDM5Q9NQX1 630 aaPredicted RBP20.78■□□□□ 0.92
HOMER3-210ENST00000599097 CLIP2Q9UDT6 1046 aa20.78■□□□□ 0.92
HOMER3-210ENST00000599097 PHF24Q9UPV7 400 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms