RNA–Protein interactions for RNA: ENST00000598697.5

TRPM4-211, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-211ENST00000598697 SND1Q7KZF4 910 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRPM4-211ENST00000598697 ARHGAP22Q7Z5H3 698 aa17.1■□□□□ 0.33
TRPM4-211ENST00000598697 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRPM4-211ENST00000598697 L3MBTL1Q9Y468 752 aa17.1■□□□□ 0.33
TRPM4-211ENST00000598697 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
TRPM4-211ENST00000598697 SOS2Q07890 1332 aaPredicted RBP17.1■□□□□ 0.33
TRPM4-211ENST00000598697 RXRAP19793 462 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 WHAMMP3Q1A5X7 153 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 YTHDF3Q7Z739 585 aaKnown RBP17.09■□□□□ 0.33
TRPM4-211ENST00000598697 MAFGO15525 162 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 SMNDC1O75940 238 aaKnown RBP eCLIP17.09■□□□□ 0.332e-8■□□□□ 9.9
TRPM4-211ENST00000598697 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
TRPM4-211ENST00000598697 BMP6P22004 513 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 MCM3P25205 808 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 MSL1Q68DK7 614 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 FAM81AQ8TBF8 368 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 SH3GL2Q99962 352 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 NOD2Q9HC29 1040 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 KIF1AQ12756 1690 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 TRPM3Q9HCF6 1732 aaPredicted RBP17.09■□□□□ 0.33
TRPM4-211ENST00000598697 FESP07332 822 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 ARL8AQ96BM9 186 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 NUP58Q9BVL2 599 aa17.09■□□□□ 0.33
TRPM4-211ENST00000598697 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRPM4-211ENST00000598697 E7EVH7 732 aa17.08■□□□□ 0.33
TRPM4-211ENST00000598697 ANP32DO95626 131 aa17.08■□□□□ 0.33
TRPM4-211ENST00000598697 IMPDH2P12268 514 aa17.08■□□□□ 0.33
TRPM4-211ENST00000598697 LSP1P33241 339 aa17.08■□□□□ 0.33
TRPM4-211ENST00000598697 MAGEC3Q8TD91 643 aa17.08■□□□□ 0.33
TRPM4-211ENST00000598697 PLEKHG4BQ96PX9 1271 aa17.08■□□□□ 0.33
TRPM4-211ENST00000598697 MAF1Q9H063 256 aa17.08■□□□□ 0.33
TRPM4-211ENST00000598697 KDM6AO15550 1401 aaPredicted RBP17.08■□□□□ 0.33
TRPM4-211ENST00000598697 FMNL1O95466 1100 aaPredicted RBP17.08■□□□□ 0.32
TRPM4-211ENST00000598697 CDC25AP30304 524 aa17.08■□□□□ 0.32
TRPM4-211ENST00000598697 HIBCHQ6NVY1 386 aaPredicted RBP17.08■□□□□ 0.32
TRPM4-211ENST00000598697 MFN1Q8IWA4 741 aa17.08■□□□□ 0.32
TRPM4-211ENST00000598697 ARL10Q8N8L6 244 aa17.08■□□□□ 0.32
TRPM4-211ENST00000598697 CCT8L2Q96SF2 557 aa17.08■□□□□ 0.32
TRPM4-211ENST00000598697 ERICH2A1L162 156 aa17.08■□□□□ 0.32
TRPM4-211ENST00000598697 GOLGA8KD6RF30 607 aa17.08■□□□□ 0.32
TRPM4-211ENST00000598697 USP14P54578 494 aa17.08■□□□□ 0.32
TRPM4-211ENST00000598697 SPECC1LQ69YQ0 1117 aa17.08■□□□□ 0.32
TRPM4-211ENST00000598697 OPA1O60313 960 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 LGR5O75473 907 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 ATP5JP18859 108 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 PNMA8AQ86V59 439 aaPredicted RBP17.07■□□□□ 0.32
TRPM4-211ENST00000598697 BPIFA3Q9BQP9 254 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
TRPM4-211ENST00000598697 MYO1AQ9UBC5 1043 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 ADGRG1Q9Y653 693 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 ZSCAN9O15535 394 aaPredicted RBP17.07■□□□□ 0.32
TRPM4-211ENST00000598697 RBL2Q08999 1139 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 TUBB2AQ13885 445 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 TRIM42Q8IWZ5 723 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 TUBB2BQ9BVA1 445 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 EPN3Q9H201 632 aa17.07■□□□□ 0.32
TRPM4-211ENST00000598697 PPANQ9NQ55 473 aaKnown RBP17.07■□□□□ 0.32
TRPM4-211ENST00000598697 DNM1LO00429 736 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 PDIA3P30101 505 aaKnown RBP17.06■□□□□ 0.32
TRPM4-211ENST00000598697 PPP1R7Q15435 360 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 YIPF2Q9BWQ6 316 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 IFFO1Q0D2I5 559 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 SPRED3Q2MJR0 410 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 ANKRD13DQ6ZTN6 518 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 NOC3LQ8WTT2 800 aaKnown RBP17.06■□□□□ 0.32
TRPM4-211ENST00000598697 ALS2CR12Q96Q35 445 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 CORO1CQ9ULV4 474 aaPredicted RBP17.06■□□□□ 0.32
TRPM4-211ENST00000598697 TBC1D2BQ9UPU7 963 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 C15orf41Q9Y2V0 281 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 CLTAP09496 248 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 ROR2Q01974 943 aaKnown RBP17.06■□□□□ 0.32
TRPM4-211ENST00000598697 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRPM4-211ENST00000598697 GUCA1BQ9UMX6 200 aa17.06■□□□□ 0.32
TRPM4-211ENST00000598697 IKBKBO14920 756 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 MYL1P05976 194 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 CASP1P29466 404 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 NLRP14Q86W24 1093 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 GPIHBP1Q8IV16 184 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 CUL5Q93034 780 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 DIAPH2O60879 1101 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 ATP6V1G2O95670 118 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 SF3A3Q12874 501 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRPM4-211ENST00000598697 PDIA6Q15084 440 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 ANO1Q5XXA6 986 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 CAGE1Q8TC20 777 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 RRP36Q96EU6 259 aaKnown RBP17.05■□□□□ 0.32
TRPM4-211ENST00000598697 SUCLG2Q96I99 432 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 SLF1Q9BQI6 1058 aa17.05■□□□□ 0.32
TRPM4-211ENST00000598697 MMADHCQ9H3L0 296 aaPredicted RBP17.05■□□□□ 0.32
TRPM4-211ENST00000598697 UBE2Q2LH0YL09 131 aa17.04■□□□□ 0.32
TRPM4-211ENST00000598697 GRM8O00222 908 aa17.04■□□□□ 0.32
TRPM4-211ENST00000598697 LINGO3P0C6S8 592 aa17.04■□□□□ 0.32
TRPM4-211ENST00000598697 FERP16591 822 aa17.04■□□□□ 0.32
TRPM4-211ENST00000598697 CTCFP49711 727 aaPredicted RBP17.04■□□□□ 0.32
TRPM4-211ENST00000598697 DHX32Q7L7V1 743 aaKnown RBP17.04■□□□□ 0.32
TRPM4-211ENST00000598697 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms