RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 NAPBQ9H115 298 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 INCENPQ9NQS7 918 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 A0A0G2JMZ2 1700 aa16.41■□□□□ 0.22
SCAF1-203ENST00000598359 LAMA3Q16787 3333 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 SLC15A5A6NIM6 579 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 ERCC3P19447 782 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 CCND3P30281 292 aaPredicted RBP16.4■□□□□ 0.22
SCAF1-203ENST00000598359 FAM47AQ5JRC9 791 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 MAP3K21Q5TCX8 1036 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 NPLOC4Q8TAT6 608 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 GOPCQ9HD26 462 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 CLIP2Q9UDT6 1046 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 IVNS1ABPQ9Y6Y0 642 aa16.4■□□□□ 0.22
SCAF1-203ENST00000598359 IGKV6D-41A0A0C4DH26 115 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 A0A0D9SFI3 127 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 PPARAQ07869 468 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 AAMPQ13685 434 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 GRB14Q14449 540 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 TMEM132BQ14DG7 1078 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 CHD1LQ86WJ1 897 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 ZNF444Q8N0Y2 327 aaPredicted RBP16.39■□□□□ 0.21
SCAF1-203ENST00000598359 CHMP4CQ96CF2 233 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 PAWRQ96IZ0 340 aaKnown RBP16.39■□□□□ 0.21
SCAF1-203ENST00000598359 NYAP2Q9P242 653 aa16.39■□□□□ 0.21
SCAF1-203ENST00000598359 NDUFB10O96000 172 aa16.38■□□□□ 0.21
SCAF1-203ENST00000598359 ADORA2AP29274 412 aa16.38■□□□□ 0.21
SCAF1-203ENST00000598359 NUCB1Q02818 461 aa16.38■□□□□ 0.21
SCAF1-203ENST00000598359 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
SCAF1-203ENST00000598359 NCAPG2Q86XI2 1143 aa16.38■□□□□ 0.21
SCAF1-203ENST00000598359 TRMT44Q8IYL2 757 aaKnown RBP16.38■□□□□ 0.21
SCAF1-203ENST00000598359 LRRC47Q8N1G4 583 aaKnown RBP16.38■□□□□ 0.21
SCAF1-203ENST00000598359 MB21D1Q8N884 522 aa16.38■□□□□ 0.21
SCAF1-203ENST00000598359 RILPL2Q969X0 211 aa16.38■□□□□ 0.21
SCAF1-203ENST00000598359 TACC3Q9Y6A5 838 aa16.38■□□□□ 0.21
SCAF1-203ENST00000598359 PARP14Q460N5 1801 aa16.38■□□□□ 0.21
SCAF1-203ENST00000598359 F5H6K3 240 aa16.37■□□□□ 0.21
SCAF1-203ENST00000598359 CYP2C19P33261 490 aa16.37■□□□□ 0.21
SCAF1-203ENST00000598359 TFAP4Q01664 338 aa16.37■□□□□ 0.21
SCAF1-203ENST00000598359 KLRC3Q07444 240 aa16.37■□□□□ 0.21
SCAF1-203ENST00000598359 PLEKHM2Q8IWE5 1019 aa16.37■□□□□ 0.21
SCAF1-203ENST00000598359 MTMR4Q9NYA4 1195 aa16.37■□□□□ 0.21
SCAF1-203ENST00000598359 PPP1R9AQ9ULJ8 1098 aa16.37■□□□□ 0.21
SCAF1-203ENST00000598359 VWA5AO00534 786 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 COBLO75128 1261 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 TSPY3P0CV98 308 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 TSPY8P0CW00 308 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 MNX1P50219 401 aaPredicted RBP16.36■□□□□ 0.21
SCAF1-203ENST00000598359 PDE4BQ07343 736 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 DPP9Q86TI2 863 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
SCAF1-203ENST00000598359 SHCBP1Q8NEM2 672 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 HTATIP2Q9BUP3 242 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 HELLSQ9NRZ9 838 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 ADAMTS5Q9UNA0 930 aa16.36■□□□□ 0.21
SCAF1-203ENST00000598359 COL11A1P12107 1806 aaPredicted RBP16.35■□□□□ 0.21
SCAF1-203ENST00000598359 SLC3A2P08195 630 aaKnown RBP16.35■□□□□ 0.21
SCAF1-203ENST00000598359 HOXC6P09630 235 aa16.35■□□□□ 0.21
SCAF1-203ENST00000598359 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
SCAF1-203ENST00000598359 LHX8Q68G74 356 aa16.35■□□□□ 0.21
SCAF1-203ENST00000598359 TRPV1Q8NER1 839 aa16.35■□□□□ 0.21
SCAF1-203ENST00000598359 REPS2Q8NFH8 660 aa16.35■□□□□ 0.21
SCAF1-203ENST00000598359 NEDD1Q8NHV4 660 aa16.35■□□□□ 0.21
SCAF1-203ENST00000598359 PRO3102Q9H379 93 aa16.35■□□□□ 0.21
SCAF1-203ENST00000598359 OGDHLQ9ULD0 1010 aa16.35■□□□□ 0.21
SCAF1-203ENST00000598359 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCAF1-203ENST00000598359 NMT2O60551 498 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 TTLL1O95922 423 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 CNGA1P29973 690 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 SLC4A3P48751 1232 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 MCMDC2Q4G0Z9 681 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 NECAB2Q7Z6G3 386 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 SLF1Q9BQI6 1058 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 MROH8Q9H579 483 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 ZNF214Q9UL59 606 aaPredicted RBP16.34■□□□□ 0.21
SCAF1-203ENST00000598359 UNC80Q8N2C7 3258 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
SCAF1-203ENST00000598359 MYH4Q9Y623 1939 aa16.33■□□□□ 0.21
SCAF1-203ENST00000598359 STRNO43815 780 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 FGAP02671 866 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 PGK2P07205 417 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 STAT3P40763 770 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 SLFN13Q68D06 897 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 RASGRP2Q7LDG7 609 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 MKL1Q969V6 931 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 KIFC2Q96AC6 838 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 PPP4R2Q9NY27 417 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 ISY1Q9ULR0 285 aaKnown RBP16.33■□□□□ 0.2
SCAF1-203ENST00000598359 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.2
SCAF1-203ENST00000598359 TSPY2A6NKD2 308 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 RANBP6O60518 1105 aaKnown RBP16.32■□□□□ 0.2
SCAF1-203ENST00000598359 SLC25A27O95847 323 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 IGHA2P01877 340 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 HSPD1P10809 573 aaKnown RBP16.32■□□□□ 0.2
SCAF1-203ENST00000598359 FCER1AP12319 257 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 SDSP20132 328 aa16.32■□□□□ 0.2
SCAF1-203ENST00000598359 HAND2P61296 217 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms