RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 FAM151AQ8WW52 585 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 TRIB2Q92519 343 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 CNNM2Q9H8M5 875 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 TOMM22Q9NS69 142 aa14.21□□□□□ -0.13
SHKBP1-213ENST00000597325 ATRNL1Q5VV63 1379 aa14.21□□□□□ -0.14
SHKBP1-213ENST00000597325 E7EWF7 191 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 HMGB1P09429 215 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 RABEP1Q15276 862 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 FAM110CQ1W6H9 321 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 FASTKD5Q7L8L6 764 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 STK11IPQ8N1F8 1099 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 ANKRD13CQ8N6S4 541 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 NCOA7Q8NI08 942 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 STAG1Q8WVM7 1258 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 KRT23Q9C075 422 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 HCN4Q9Y3Q4 1203 aa14.2□□□□□ -0.14
SHKBP1-213ENST00000597325 CASTP20810 708 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 PLCD1P51178 756 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 RRP12Q5JTH9 1297 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 BLOC1S2Q6QNY1 142 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 ALYREFQ86V81 257 aaKnown RBP14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 IL17RAQ96F46 866 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 NEK1Q96PY6 1258 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 LRFN3Q9BTN0 628 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 EHD4Q9H223 541 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 PI4KBQ9UBF8 816 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 CYP46A1Q9Y6A2 500 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 CACNA1AO00555 2505 aa14.19□□□□□ -0.14
SHKBP1-213ENST00000597325 NEDD4P46934 1319 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 DDTLA6NHG4 134 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 PRKAR2AP13861 404 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 ANP32AP39687 249 aaKnown RBP14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 NT5C2P49902 561 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 ADCK5Q3MIX3 580 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 STOX1Q6ZVD7 989 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 C16orf86Q6ZW13 317 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 ZFPM1Q8IX07 1006 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 SMCR8Q8TEV9 937 aaPredicted RBP14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 ESR2Q92731 530 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 TM6SF1Q9BZW5 370 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 MKNK2Q9HBH9 465 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 THEGQ9P2T0 379 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 SWAP70Q9UH65 585 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 AFG3L2Q9Y4W6 797 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 FRMPD3Q5JV73 1810 aa14.18□□□□□ -0.14
SHKBP1-213ENST00000597325 TRANK1O15050 2925 aa14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 ST18O60284 1047 aa14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 MRPS5P82675 430 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 IL27Q8NEV9 243 aa14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 DYNLL2Q96FJ2 89 aa14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 KIF2CQ99661 725 aa14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 UPF3BQ9BZI7 483 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 HERC5Q9UII4 1024 aaKnown RBP14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 PHIPQ8WWQ0 1821 aa14.17□□□□□ -0.14
SHKBP1-213ENST00000597325 CFAP54Q96N23 3096 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 SIPA1L1O43166 1804 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 B4E1Z4 1266 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 ORC4O43929 436 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 MCM5P33992 734 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 CDK8P49336 464 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 NEK4P51957 841 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 FGD1P98174 961 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 EVX2Q03828 476 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 GADL1Q6ZQY3 521 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 RUFY3Q7L099 469 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 SH3BP5LQ7L8J4 393 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 FOXP4Q8IVH2 680 aaPredicted RBP14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 ZSWIM6Q9HCJ5 1215 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 ZHX2Q9Y6X8 837 aa14.16□□□□□ -0.14
SHKBP1-213ENST00000597325 MYH8P13535 1937 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 TSPY2A6NKD2 308 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 SMIM22K7EJ46 135 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 RANBP6O60518 1105 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 KDM4AO75164 1064 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 PRDM1O75626 825 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 PTPRAP18433 802 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 RPS6KB1P23443 525 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 GABPAQ06546 454 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 CACNB2Q08289 660 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 MB21D2Q8IYB1 491 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 ZNF444Q8N0Y2 327 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 SLC44A5Q8NCS7 719 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 SENP6Q9GZR1 1112 aaPredicted RBP14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 PDRG1Q9NUG6 133 aa14.15□□□□□ -0.14
SHKBP1-213ENST00000597325 WDR19Q8NEZ3 1342 aa14.15□□□□□ -0.15
SHKBP1-213ENST00000597325 PHF20L1A8MW92 1017 aa14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 PRC1O43663 620 aa14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 FGRP09769 529 aa14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 TSPY3P0CV98 308 aa14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 TSPY8P0CW00 308 aa14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 POTEEQ6S8J3 1075 aa14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 DHX32Q7L7V1 743 aaKnown RBP14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 NECAB3Q96P71 396 aaPredicted RBP14.14□□□□□ -0.15
SHKBP1-213ENST00000597325 UBAC1Q9BSL1 405 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms