RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 TMTC3Q6ZXV5 915 aa13.63□□□□□ -0.23
PDE4C-210ENST00000597297 CMTR1Q8N1G2 835 aaKnown RBP13.63□□□□□ -0.23
PDE4C-210ENST00000597297 NEDD1Q8NHV4 660 aa13.63□□□□□ -0.23
PDE4C-210ENST00000597297 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.63□□□□□ -0.23
PDE4C-210ENST00000597297 KIF28PB7ZC32 967 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 PLEKHA8P1O95397 391 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 GUCY1A2P33402 732 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 GABPAQ06546 454 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 FUT2Q10981 343 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 CCDC82Q8N4S0 544 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 CLMNQ96JQ2 1002 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 PLIN4Q96Q06 1357 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 USP28Q96RU2 1077 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 MAP3K14Q99558 947 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 PAPPA2Q9BXP8 1791 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-210ENST00000597297 CNTNAP5Q8WYK1 1306 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 PRPF3O43395 683 aaKnown RBP13.62□□□□□ -0.23
PDE4C-210ENST00000597297 AKAP17AQ02040 695 aaKnown RBP13.62□□□□□ -0.23
PDE4C-210ENST00000597297 TPRNQ4KMQ1 711 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 CCDC183Q5T5S1 534 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 GAS2L3Q86XJ1 694 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 ZSCAN29Q8IWY8 852 aaPredicted RBP13.62□□□□□ -0.23
PDE4C-210ENST00000597297 PNMA1Q8ND90 353 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 CCDC102AQ96A19 550 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 SWAP70Q9UH65 585 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 RCOR1Q9UKL0 485 aa13.62□□□□□ -0.23
PDE4C-210ENST00000597297 GOLGA6L4A6NEF3 574 aa13.61□□□□□ -0.23
PDE4C-210ENST00000597297 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
PDE4C-210ENST00000597297 HLA-DOAP06340 250 aa13.61□□□□□ -0.23
PDE4C-210ENST00000597297 KIF5BP33176 963 aa13.61□□□□□ -0.23
PDE4C-210ENST00000597297 IREB2P48200 963 aaKnown RBP13.61□□□□□ -0.23
PDE4C-210ENST00000597297 CEBPZQ03701 1054 aaKnown RBP13.61□□□□□ -0.23
PDE4C-210ENST00000597297 GRM4Q14833 912 aa13.61□□□□□ -0.23
PDE4C-210ENST00000597297 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.61□□□□□ -0.23
PDE4C-210ENST00000597297 SLC10A4Q96EP9 437 aa13.61□□□□□ -0.23
PDE4C-210ENST00000597297 FTOQ9C0B1 505 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDE4C-210ENST00000597297 RTEL1Q9NZ71 1219 aa13.61□□□□□ -0.23
PDE4C-210ENST00000597297 SYCE3A1L190 88 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 MMP1P03956 469 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 SLC10A3P09131 477 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 U2AF2P26368 475 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDE4C-210ENST00000597297 MAP2K2P36507 400 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 MAP3K9P80192 1104 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 GNL2Q13823 731 aaKnown RBP13.6□□□□□ -0.23
PDE4C-210ENST00000597297 SAFBQ15424 915 aaKnown RBP eCLIP13.6□□□□□ -0.23
PDE4C-210ENST00000597297 RASAL3Q86YV0 1011 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 SRBD1Q8N5C6 995 aaKnown RBP13.6□□□□□ -0.23
PDE4C-210ENST00000597297 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 CSRNP1Q96S65 589 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 TMEM47Q9BQJ4 181 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 EHD4Q9H223 541 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 SERPINB13Q9UIV8 391 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 TAOK2Q9UL54 1235 aa13.6□□□□□ -0.23
PDE4C-210ENST00000597297 NOVP48745 357 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 MRE11P49959 708 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 MAP3K10Q02779 954 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
PDE4C-210ENST00000597297 PKN1Q16512 942 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 LRSAM1Q6UWE0 723 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 ANKRD13AQ8IZ07 590 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDE4C-210ENST00000597297 ZKSCAN4Q969J2 545 aaPredicted RBP13.59□□□□□ -0.23
PDE4C-210ENST00000597297 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDE4C-210ENST00000597297 POLR3EQ9NVU0 708 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 STX8Q9UNK0 236 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 MYH4Q9Y623 1939 aa13.59□□□□□ -0.23
PDE4C-210ENST00000597297 YEATS4O95619 227 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 XBP1P17861 261 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 INPP5BP32019 993 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 NASPP49321 788 aaPredicted RBP13.58□□□□□ -0.23
PDE4C-210ENST00000597297 GNAQP50148 359 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 NOGQ13253 232 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 DCAF15Q66K64 600 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 DIS3L2Q8IYB7 885 aaKnown RBP13.58□□□□□ -0.23
PDE4C-210ENST00000597297 HOOK2Q96ED9 719 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 CEP95Q96GE4 821 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 DHX36Q9H2U1 1008 aaKnown RBP13.58□□□□□ -0.23
PDE4C-210ENST00000597297 GRPEL1Q9HAV7 217 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 ZNF112Q9UJU3 913 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 KCNJ14Q9UNX9 436 aa13.58□□□□□ -0.23
PDE4C-210ENST00000597297 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.23
PDE4C-210ENST00000597297 COL2A1P02458 1487 aaPredicted RBP13.58□□□□□ -0.24
PDE4C-210ENST00000597297 BAZ2BQ9UIF8 2168 aaKnown RBP13.58□□□□□ -0.24
PDE4C-210ENST00000597297 ATRNL1Q5VV63 1379 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 IGKV6D-41A0A0C4DH26 115 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 UNCXA6NJT0 531 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 PHF20L1A8MW92 1017 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.24
PDE4C-210ENST00000597297 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
PDE4C-210ENST00000597297 AKR1B1P15121 316 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 LIG1P18858 919 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 SHMT1P34896 483 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 STK38Q15208 465 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 LINC00301Q8NCQ3 95 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 BICD2Q8TD16 824 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 WRNIP1Q96S55 665 aa13.58□□□□□ -0.24
PDE4C-210ENST00000597297 FOXP1Q9H334 677 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms