RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 DSG3P32926 999 aa19.09■□□□□ 0.65
USHBP1-205ENST00000595993 SNX17Q15036 470 aa19.09■□□□□ 0.65
USHBP1-205ENST00000595993 SLC44A5Q8NCS7 719 aa19.09■□□□□ 0.65
USHBP1-205ENST00000595993 FSD1Q9BTV5 496 aa19.09■□□□□ 0.65
USHBP1-205ENST00000595993 TMX2Q9Y320 296 aa19.09■□□□□ 0.65
USHBP1-205ENST00000595993 PRKAB2O43741 272 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 COBLO75128 1261 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 ERCC3P19447 782 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 CNGA1P29973 690 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 DPP9Q86TI2 863 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 APPBP2Q92624 585 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 OSBP2Q969R2 916 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 TANGO6Q9C0B7 1094 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 MROH8Q9H579 483 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 ATP8A2Q9NTI2 1148 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 EYSQ5T1H1 3165 aa19.08■□□□□ 0.64
USHBP1-205ENST00000595993 MPHOSPH10O00566 681 aaKnown RBP19.07■□□□□ 0.64
USHBP1-205ENST00000595993 SEPT4O43236 478 aa19.07■□□□□ 0.64
USHBP1-205ENST00000595993 ZFYP08048 801 aaPredicted RBP19.07■□□□□ 0.64
USHBP1-205ENST00000595993 RTP1P59025 263 aa19.07■□□□□ 0.64
USHBP1-205ENST00000595993 EVI5LQ96CN4 794 aa19.07■□□□□ 0.64
USHBP1-205ENST00000595993 VCPKMTQ9H867 229 aa19.07■□□□□ 0.64
USHBP1-205ENST00000595993 ADAMTS5Q9UNA0 930 aa19.07■□□□□ 0.64
USHBP1-205ENST00000595993 COL11A1P12107 1806 aaPredicted RBP19.07■□□□□ 0.64
USHBP1-205ENST00000595993 M0R2C6 588 aa19.06■□□□□ 0.64
USHBP1-205ENST00000595993 AKR1B1P15121 316 aa19.06■□□□□ 0.64
USHBP1-205ENST00000595993 ATN1P54259 1190 aaPredicted RBP19.06■□□□□ 0.64
USHBP1-205ENST00000595993 ARRDC4Q8NCT1 418 aa19.06■□□□□ 0.64
USHBP1-205ENST00000595993 DYNLL2Q96FJ2 89 aa19.06■□□□□ 0.64
USHBP1-205ENST00000595993 SEC62Q99442 399 aaKnown RBP19.06■□□□□ 0.64
USHBP1-205ENST00000595993 LBHD1Q9BQE6 289 aaPredicted RBP19.06■□□□□ 0.64
USHBP1-205ENST00000595993 GREB1LQ9C091 1923 aaPredicted RBP19.06■□□□□ 0.64
USHBP1-205ENST00000595993 WDR46O15213 610 aaKnown RBP19.05■□□□□ 0.64
USHBP1-205ENST00000595993 ICA1Q05084 483 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 GJC2Q5T442 439 aaPredicted RBP19.05■□□□□ 0.64
USHBP1-205ENST00000595993 C12orf60Q5U649 245 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 C1orf53Q5VUE5 145 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 SLC39A5Q6ZMH5 540 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 CLEC10AQ8IUN9 316 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 ATG4CQ96DT6 458 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 MAML3Q96JK9 1138 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 CCDC17Q96LX7 622 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 STRBPQ96SI9 672 aaKnown RBP19.05■□□□□ 0.64
USHBP1-205ENST00000595993 SH2D4AQ9H788 454 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 ARHGEF10LQ9HCE6 1279 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 ZNFX1Q9P2E3 1918 aaKnown RBP19.05■□□□□ 0.64
USHBP1-205ENST00000595993 ROBO3Q96MS0 1386 aa19.05■□□□□ 0.64
USHBP1-205ENST00000595993 SMIM22K7EJ46 135 aa19.04■□□□□ 0.64
USHBP1-205ENST00000595993 NEFLP07196 543 aa19.04■□□□□ 0.64
USHBP1-205ENST00000595993 ZMYM1Q5SVZ6 1142 aa19.04■□□□□ 0.64
USHBP1-205ENST00000595993 GUCD1Q96NT3 240 aa19.04■□□□□ 0.64
USHBP1-205ENST00000595993 SLC5A4Q9NY91 659 aa19.04■□□□□ 0.64
USHBP1-205ENST00000595993 NRBP1Q9UHY1 535 aa19.04■□□□□ 0.64
USHBP1-205ENST00000595993 TRIM6-TRIM34B2RNG4 842 aa19.03■□□□□ 0.64
USHBP1-205ENST00000595993 GPAA1O43292 621 aa19.03■□□□□ 0.64
USHBP1-205ENST00000595993 FLOT1O75955 427 aa19.03■□□□□ 0.64
USHBP1-205ENST00000595993 TMEM132BQ14DG7 1078 aa19.03■□□□□ 0.64
USHBP1-205ENST00000595993 C16orf86Q6ZW13 317 aa19.03■□□□□ 0.64
USHBP1-205ENST00000595993 CENPQQ7L2Z9 268 aaPredicted RBP19.03■□□□□ 0.64
USHBP1-205ENST00000595993 SLC4A4Q9Y6R1 1079 aa19.03■□□□□ 0.64
USHBP1-205ENST00000595993 PLXNA1Q9UIW2 1896 aa19.03■□□□□ 0.64
USHBP1-205ENST00000595993 CDH23Q9H251 3354 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 KBTBD13C9JR72 458 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 SLC25A27O95847 323 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 GSPT1P15170 499 aaKnown RBP19.02■□□□□ 0.64
USHBP1-205ENST00000595993 CDK8P49336 464 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 LRRC41Q15345 812 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 LRRFIP1Q32MZ4 808 aaKnown RBP19.02■□□□□ 0.64
USHBP1-205ENST00000595993 SKAP1Q86WV1 359 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 NCAPG2Q86XI2 1143 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 SPICE1Q8N0Z3 855 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 RILPL2Q969X0 211 aa19.02■□□□□ 0.64
USHBP1-205ENST00000595993 CYP2D7A0A087X1C5 515 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 GSG1L2A8MUP6 293 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 FCER1AP12319 257 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 FAM47AQ5JRC9 791 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 PRAMEF19Q5SWL8 479 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 ANO1Q5XXA6 986 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 CCDC129Q6ZRS4 1044 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 RIOX2Q8IUF8 465 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 REPS2Q8NFH8 660 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 PDLIM7Q9NR12 457 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 PRKAG2Q9UGJ0 569 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 ZNF214Q9UL59 606 aaPredicted RBP19.01■□□□□ 0.63
USHBP1-205ENST00000595993 ATP11BQ9Y2G3 1177 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 DIS3Q9Y2L1 958 aaKnown RBP19.01■□□□□ 0.63
USHBP1-205ENST00000595993 SPTBN5Q9NRC6 3674 aaKnown RBP19.01■□□□□ 0.63
USHBP1-205ENST00000595993 VCANP13611 3396 aa19.01■□□□□ 0.63
USHBP1-205ENST00000595993 USP17L12C9JPN9 530 aa19■□□□□ 0.63
USHBP1-205ENST00000595993 USP17L21D6R901 530 aa19■□□□□ 0.63
USHBP1-205ENST00000595993 EEF2P13639 858 aaKnown RBP19■□□□□ 0.63
USHBP1-205ENST00000595993 PLS1Q14651 629 aa19■□□□□ 0.63
USHBP1-205ENST00000595993 TRIM60Q495X7 471 aa19■□□□□ 0.63
USHBP1-205ENST00000595993 TTC22Q5TAA0 569 aa19■□□□□ 0.63
USHBP1-205ENST00000595993 FAM227BQ96M60 508 aa19■□□□□ 0.63
USHBP1-205ENST00000595993 KANSL2Q9H9L4 492 aa19■□□□□ 0.63
USHBP1-205ENST00000595993 EPB41L4AQ9HCS5 686 aaPredicted RBP19■□□□□ 0.63
USHBP1-205ENST00000595993 PHF24Q9UPV7 400 aa19■□□□□ 0.63
USHBP1-205ENST00000595993 PRUNE2Q8WUY3 3088 aa18.99■□□□□ 0.63
USHBP1-205ENST00000595993 A0A0D9SFI3 127 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms