RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.33
SHKBP1-206ENST00000595523 GPR142Q7Z601 462 aa13.02□□□□□ -0.33
SHKBP1-206ENST00000595523 GMCL1P1Q8NEA9 526 aa13.02□□□□□ -0.33
SHKBP1-206ENST00000595523 HOXC10Q9NYD6 342 aa13.02□□□□□ -0.33
SHKBP1-206ENST00000595523 SYNPO2Q9UMS6 1093 aa13.02□□□□□ -0.33
SHKBP1-206ENST00000595523 ADAMTS5Q9UNA0 930 aa13.02□□□□□ -0.33
SHKBP1-206ENST00000595523 CEP290O15078 2479 aa13.02□□□□□ -0.33
SHKBP1-206ENST00000595523 SGSM2O43147 1006 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 ADCY3O60266 1144 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 MAPK4P31152 587 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 PTH1RQ03431 593 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 MTFR1Q15390 333 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 RRP12Q5JTH9 1297 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 RASGRP2Q7LDG7 609 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 REPS2Q8NFH8 660 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 USP6NLQ92738 828 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 CCDC136Q96JN2 1154 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 MOV10L1Q9BXT6 1211 aaKnown RBP13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 PPP1R9AQ9ULJ8 1098 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 MYH6P13533 1939 aa13.01□□□□□ -0.33
SHKBP1-206ENST00000595523 MCM3APO60318 1980 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 ZNF213O14771 459 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 MYCP01106 439 aaPredicted RBP13□□□□□ -0.33
SHKBP1-206ENST00000595523 TMEM132BQ14DG7 1078 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 BMP2KLQ5H9B9 411 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 MORN1Q5T089 497 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 PLEKHH3Q7Z736 793 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 NBPF11Q86T75 865 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 MB21D1Q8N884 522 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 SLAIN1Q8ND83 568 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 PXYLP1Q8TE99 480 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 SPATC1LQ9H0A9 340 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 TOMM22Q9NS69 142 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 STX8Q9UNK0 236 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 LCTP09848 1927 aa13□□□□□ -0.33
SHKBP1-206ENST00000595523 VWA5AO00534 786 aa12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 PCP11498 1178 aaKnown RBP12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 CCNA1P78396 465 aa12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 SLFN13Q68D06 897 aa12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 TRIB2Q92519 343 aa12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 SLF1Q9BQI6 1058 aa12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 ZNF214Q9UL59 606 aaPredicted RBP12.99□□□□□ -0.33
SHKBP1-206ENST00000595523 INHAP05111 366 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 ERCC3P19447 782 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 CYP2B6P20813 491 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 TRIM32Q13049 653 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 GRB14Q14449 540 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 IMMTQ16891 758 aaKnown RBP12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 SHCBP1Q8NEM2 672 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 CHMP4CQ96CF2 233 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 GMCL1Q96IK5 515 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 NUDT12Q9BQG2 462 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 RNF41Q9H4P4 317 aaPredicted RBP12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
SHKBP1-206ENST00000595523 B4E1Z4 1266 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 KDM4AO75164 1064 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 NEFLP07196 543 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 CYP21A2P08686 494 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 BMP3P12645 472 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 XRCC5P13010 732 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 CCL5P13501 91 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 EN2P19622 333 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 PTPREP23469 700 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 MCCP23508 829 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 MAP2K5Q13163 448 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 PLS1Q14651 629 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 CCL14Q16627 93 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 WDR78Q5VTH9 848 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 CCAR1Q8IX12 1150 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 PRPF38AQ8NAV1 312 aaKnown RBP12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 ESR2Q92731 530 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 TMEM47Q9BQJ4 181 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 ZKSCAN3Q9BRR0 538 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 UNC93B1Q9H1C4 597 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 BIN2Q9UBW5 565 aaPredicted RBP12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 CTNNA3Q9UI47 895 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 FEM1BQ9UK73 627 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 DNAH12Q6ZR08 3092 aa12.97□□□□□ -0.33
SHKBP1-206ENST00000595523 ALPK3Q96L96 1907 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 SLC15A5A6NIM6 579 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 HMGCRP04035 888 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 TOP1P11387 765 aaKnown RBP12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 RGS2P41220 211 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 SLC1A4P43007 532 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 KCTD1Q719H9 257 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 MAP4K1Q92918 833 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 KIFC2Q96AC6 838 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 APBA2Q99767 749 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 ESYT1Q9BSJ8 1104 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 FLRT1Q9NZU1 646 aa12.96□□□□□ -0.33
SHKBP1-206ENST00000595523 BAZ2BQ9UIF8 2168 aaKnown RBP12.96□□□□□ -0.34
SHKBP1-206ENST00000595523 TMEM232C9JQI7 657 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms