RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 ERCC3P19447 782 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 COG2Q14746 738 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 SLC9C2Q5TAH2 1124 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 LCORLQ8N3X6 602 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 RHPN1Q8TCX5 695 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 PANK1Q8TE04 598 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 SDR42E1Q8WUS8 393 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 DYNLL2Q96FJ2 89 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 SPATC1LQ9H0A9 340 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 THEGQ9P2T0 379 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 ADAMTS5Q9UNA0 930 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 MUC6Q6W4X9 2439 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
NOTCH3-202ENST00000595045 AKR1B1P15121 316 aa11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 DSG3P32926 999 aa11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 AKNAD1Q5T1N1 836 aa11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 SHCBP1Q8NEM2 672 aa11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 UHRF1Q96T88 793 aaPredicted RBP11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 GAS2L1Q99501 681 aaPredicted RBP11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 XPNPEP3Q9NQH7 507 aa11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 TMEM39AQ9NV64 488 aa11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 MCM9Q9NXL9 1143 aa11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 A0A0G2JMZ2 1700 aa11.79□□□□□ -0.52
NOTCH3-202ENST00000595045 CYP2D7A0A087X1C5 515 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 A0A1W2PQ45 241 aaPredicted RBP11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 A0A1W2PQY0 241 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 PGK1P00558 417 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 POLR3DP05423 398 aaPredicted RBP11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 RARBP10826 455 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 PBX2P40425 430 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 MRPS5P82675 430 aaKnown RBP11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 FAAP100Q0VG06 881 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 ATG4CQ96DT6 458 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 MAML3Q96JK9 1138 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 PRDM12Q9H4Q4 367 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 CABP5Q9NP86 173 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 SLC5A4Q9NY91 659 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 HOXC10Q9NYD6 342 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 TMX2Q9Y320 296 aa11.78□□□□□ -0.52
NOTCH3-202ENST00000595045 GRXCR1A8MXD5 290 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 GOLIM4O00461 696 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 ADGRE1Q14246 886 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 TMEM132BQ14DG7 1078 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 ANKRD33Q7Z3H0 272 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 RNF180Q86T96 592 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 FTSJ3Q8IY81 847 aaKnown RBP11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 ABRAQ8N0Z2 381 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 SPICE1Q8N0Z3 855 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 REPS2Q8NFH8 660 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 PBX4Q9BYU1 374 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 MROH8Q9H579 483 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 ARMT1Q9H993 441 aa11.77□□□□□ -0.53
NOTCH3-202ENST00000595045 DCDC2CA8MYV0 355 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 TIMP1P01033 207 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 TAL1P17542 331 aaPredicted RBP11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 PLS1Q14651 629 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 CCDC85BQ15834 202 aaPredicted RBP11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 TMEM240Q5SV17 173 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 CCDC129Q6ZRS4 1044 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 TMEM179Q6ZVK1 233 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 C16orf59Q7L2K0 433 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 NCAPG2Q86XI2 1143 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 ERC1Q8IUD2 1116 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 MB21D1Q8N884 522 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 LENG1Q96BZ8 264 aaPredicted RBP11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 TOX2Q96NM4 488 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 CRNKL1Q9BZJ0 848 aaKnown RBP11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 TANGO6Q9C0B7 1094 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 VCPKMTQ9H867 229 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 ZBTB40Q9NUA8 1239 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 FBXO28Q9NVF7 368 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 NRBP1Q9UHY1 535 aa11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 PRRC2BQ5JSZ5 2229 aaKnown RBP11.76□□□□□ -0.53
NOTCH3-202ENST00000595045 COL11A1P12107 1806 aaPredicted RBP11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 PARP14Q460N5 1801 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 GBF1Q92538 1859 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 MPHOSPH10O00566 681 aaKnown RBP11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 FCER1AP12319 257 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 ADD2P35612 726 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 CDK8P49336 464 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 MIER1Q8N108 512 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 IL27Q8NEV9 243 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 NECAB3Q96P71 396 aaPredicted RBP11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 DNAJC2Q99543 621 aaKnown RBP11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 TBX21Q9UL17 535 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 ROBO3Q96MS0 1386 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 BRWD1Q9NSI6 2320 aa11.75□□□□□ -0.53
NOTCH3-202ENST00000595045 USP17L12C9JPN9 530 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 USP17L21D6R901 530 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 ADAMTS4O75173 837 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 FLOT1O75955 427 aa11.74□□□□□ -0.53
NOTCH3-202ENST00000595045 MBD4O95243 580 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms