RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 SOCS4Q8WXH5 440 aa17.51■□□□□ 0.39
USE1-205ENST00000594724 TRIB2Q92519 343 aa17.51■□□□□ 0.39
USE1-205ENST00000594724 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
USE1-205ENST00000594724 KIAA0100Q14667 2235 aaKnown RBP17.51■□□□□ 0.39
USE1-205ENST00000594724 RLFQ13129 1914 aa17.51■□□□□ 0.39
USE1-205ENST00000594724 HIP1O00291 1037 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 NMT2O60551 498 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 PTPREP23469 700 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 RGS2P41220 211 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 MFAP1P55081 439 aaKnown RBP17.5■□□□□ 0.39
USE1-205ENST00000594724 CCL14Q16627 93 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 CHMP4CQ96CF2 233 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 IL17RBQ9NRM6 502 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 ADAMTS5Q9UNA0 930 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 IVNS1ABPQ9Y6Y0 642 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 PLIN4Q96Q06 1357 aa17.5■□□□□ 0.39
USE1-205ENST00000594724 SLC15A5A6NIM6 579 aa17.49■□□□□ 0.39
USE1-205ENST00000594724 FGRP09769 529 aa17.49■□□□□ 0.39
USE1-205ENST00000594724 XRCC5P13010 732 aaKnown RBP17.49■□□□□ 0.39
USE1-205ENST00000594724 ERCC3P19447 782 aa17.49■□□□□ 0.39
USE1-205ENST00000594724 GJA8P48165 433 aa17.49■□□□□ 0.39
USE1-205ENST00000594724 MAP2K5Q13163 448 aa17.49■□□□□ 0.39
USE1-205ENST00000594724 TMEM132BQ14DG7 1078 aa17.49■□□□□ 0.39
USE1-205ENST00000594724 RRP12Q5JTH9 1297 aaKnown RBP17.49■□□□□ 0.39
USE1-205ENST00000594724 DEFB118Q96PH6 123 aa17.49■□□□□ 0.39
USE1-205ENST00000594724 PPP1R9AQ9ULJ8 1098 aa17.49■□□□□ 0.39
USE1-205ENST00000594724 VWA5AO00534 786 aa17.48■□□□□ 0.39
USE1-205ENST00000594724 ORC4O43929 436 aa17.48■□□□□ 0.39
USE1-205ENST00000594724 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
USE1-205ENST00000594724 SLFN13Q68D06 897 aa17.48■□□□□ 0.39
USE1-205ENST00000594724 NCAPG2Q86XI2 1143 aa17.48■□□□□ 0.39
USE1-205ENST00000594724 NKX2-3Q8TAU0 364 aa17.48■□□□□ 0.39
USE1-205ENST00000594724 U2AF1L4Q8WU68 220 aaKnown RBP17.48■□□□□ 0.39
USE1-205ENST00000594724 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
USE1-205ENST00000594724 IL25Q9H293 177 aa17.48■□□□□ 0.39
USE1-205ENST00000594724 STX8Q9UNK0 236 aa17.48■□□□□ 0.39
USE1-205ENST00000594724 ZMYM6O95789 1325 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 SGPL1O95470 568 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 GRB14Q14449 540 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 GMCL1P1Q8NEA9 526 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 SHCBP1Q8NEM2 672 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 NPLOC4Q8TAT6 608 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 APBA2Q99767 749 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 SLF1Q9BQI6 1058 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.47■□□□□ 0.39
USE1-205ENST00000594724 HMX1Q9NP08 348 aaPredicted RBP17.47■□□□□ 0.39
USE1-205ENST00000594724 PAK6Q9NQU5 681 aaPredicted RBP17.47■□□□□ 0.39
USE1-205ENST00000594724 RPTORQ8N122 1335 aa17.47■□□□□ 0.39
USE1-205ENST00000594724 MKI67P46013 3256 aaKnown RBP17.46■□□□□ 0.39
USE1-205ENST00000594724 TFRCP02786 760 aaKnown RBP17.46■□□□□ 0.39
USE1-205ENST00000594724 PRKAR2AP13861 404 aaKnown RBP17.46■□□□□ 0.39
USE1-205ENST00000594724 CACNB2Q08289 660 aaPredicted RBP17.46■□□□□ 0.39
USE1-205ENST00000594724 AKNAD1Q5T1N1 836 aa17.46■□□□□ 0.39
USE1-205ENST00000594724 MFSD6Q6ZSS7 791 aa17.46■□□□□ 0.39
USE1-205ENST00000594724 TBC1D10CQ8IV04 446 aa17.46■□□□□ 0.39
USE1-205ENST00000594724 TRMT44Q8IYL2 757 aaKnown RBP17.46■□□□□ 0.39
USE1-205ENST00000594724 PRPF38AQ8NAV1 312 aaKnown RBP17.46■□□□□ 0.39
USE1-205ENST00000594724 REPS2Q8NFH8 660 aa17.46■□□□□ 0.39
USE1-205ENST00000594724 FLRT1Q9NZU1 646 aa17.46■□□□□ 0.39
USE1-205ENST00000594724 SYNPO2Q9UMS6 1093 aa17.46■□□□□ 0.39
USE1-205ENST00000594724 MYH4Q9Y623 1939 aa17.46■□□□□ 0.39
USE1-205ENST00000594724 A0A0G2JMZ2 1700 aa17.46■□□□□ 0.39
USE1-205ENST00000594724 PARP14Q460N5 1801 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 ZNF213O14771 459 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 STRNO43815 780 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 BMP3P12645 472 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 MCCP23508 829 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 ADORA2AP29274 412 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 STAT3P40763 770 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 DPP9Q86TI2 863 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 RIOX2Q8IUF8 465 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 KIFC2Q96AC6 838 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 MROH8Q9H579 483 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 ZNF214Q9UL59 606 aaPredicted RBP17.45■□□□□ 0.38
USE1-205ENST00000594724 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
USE1-205ENST00000594724 MTMR7Q9Y216 660 aa17.45■□□□□ 0.38
USE1-205ENST00000594724 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 COBLO75128 1261 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 SLC25A27O95847 323 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 HOXC6P09630 235 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 SLC4A3P48751 1232 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 PPP4R3BQ5MIZ7 849 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 MAP3K21Q5TCX8 1036 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 RASGRP2Q7LDG7 609 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 STAG1Q8WVM7 1258 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 DSCC1Q9BVC3 393 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 FEM1BQ9UK73 627 aa17.44■□□□□ 0.38
USE1-205ENST00000594724 COL11A1P12107 1806 aaPredicted RBP17.43■□□□□ 0.38
USE1-205ENST00000594724 ZBED4O75132 1171 aa17.43■□□□□ 0.38
USE1-205ENST00000594724 CHMLP26374 656 aa17.43■□□□□ 0.38
USE1-205ENST00000594724 SLC1A4P43007 532 aa17.43■□□□□ 0.38
USE1-205ENST00000594724 NOVP48745 357 aa17.43■□□□□ 0.38
USE1-205ENST00000594724 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
USE1-205ENST00000594724 CPXCR1Q8N123 301 aa17.43■□□□□ 0.38
USE1-205ENST00000594724 RIPK3Q9Y572 518 aa17.43■□□□□ 0.38
USE1-205ENST00000594724 NEDD4P46934 1319 aa17.43■□□□□ 0.38
USE1-205ENST00000594724 FCER1AP12319 257 aa17.42■□□□□ 0.38
USE1-205ENST00000594724 CCND3P30281 292 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms