RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 CTU1Q7Z7A3 348 aaKnown RBP23.02■■□□□ 1.28
LSM4-203ENST00000593829 NUP88Q99567 741 aaPredicted RBP23.02■■□□□ 1.28
LSM4-203ENST00000593829 PRKCSHP14314 528 aaPredicted RBP23.01■■□□□ 1.27
LSM4-203ENST00000593829 RBPJLQ9UBG7 517 aa23.01■■□□□ 1.27
LSM4-203ENST00000593829 MORF4L1Q9UBU8 362 aa23.01■■□□□ 1.27
LSM4-203ENST00000593829 DSG3P32926 999 aa23■■□□□ 1.27
LSM4-203ENST00000593829 L1TD1Q5T7N2 865 aaKnown RBP23■■□□□ 1.27
LSM4-203ENST00000593829 CYB5R4Q7L1T6 521 aa23■■□□□ 1.27
LSM4-203ENST00000593829 GMCL1Q96IK5 515 aa23■■□□□ 1.27
LSM4-203ENST00000593829 RABGAP1Q9Y3P9 1069 aa23■■□□□ 1.27
LSM4-203ENST00000593829 MYPNQ86TC9 1320 aa23■■□□□ 1.27
LSM4-203ENST00000593829 BMP3P12645 472 aa23■■□□□ 1.27
LSM4-203ENST00000593829 GPRC5AQ8NFJ5 357 aa23■■□□□ 1.27
LSM4-203ENST00000593829 ANKS1AQ92625 1134 aa23■■□□□ 1.27
LSM4-203ENST00000593829 PAGR1Q9BTK6 254 aa23■■□□□ 1.27
LSM4-203ENST00000593829 EFCC1Q9HA90 598 aa23■■□□□ 1.27
LSM4-203ENST00000593829 TXNRD2Q9NNW7 524 aa23■■□□□ 1.27
LSM4-203ENST00000593829 TNKSO95271 1327 aa23■■□□□ 1.27
LSM4-203ENST00000593829 MCCP23508 829 aa22.99■■□□□ 1.27
LSM4-203ENST00000593829 SLC1A4P43007 532 aa22.99■■□□□ 1.27
LSM4-203ENST00000593829 POTEEQ6S8J3 1075 aa22.99■■□□□ 1.27
LSM4-203ENST00000593829 ENAHQ8N8S7 591 aaPredicted RBP22.99■■□□□ 1.27
LSM4-203ENST00000593829 ARHGAP39Q9C0H5 1083 aa22.99■■□□□ 1.27
LSM4-203ENST00000593829 FBXO28Q9NVF7 368 aa22.99■■□□□ 1.27
LSM4-203ENST00000593829 EPB41L2O43491 1005 aaKnown RBP22.98■■□□□ 1.27
LSM4-203ENST00000593829 ZKSCAN1P17029 563 aaPredicted RBP22.98■■□□□ 1.27
LSM4-203ENST00000593829 PSMC4P43686 418 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 SAMD1Q6SPF0 538 aaPredicted RBP22.98■■□□□ 1.27
LSM4-203ENST00000593829 MB21D2Q8IYB1 491 aaPredicted RBP22.98■■□□□ 1.27
LSM4-203ENST00000593829 TRIM17Q9Y577 477 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 ERVK-9P63128 1117 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 ERVK-24P63145 666 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 CAP1Q01518 475 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 OTOP1Q7RTM1 612 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 SLF1Q9BQI6 1058 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 KAT14Q9H8E8 782 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 PPP1R9AQ9ULJ8 1098 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 ISY1Q9ULR0 285 aaKnown RBP22.98■■□□□ 1.27
LSM4-203ENST00000593829 MTMR7Q9Y216 660 aa22.98■■□□□ 1.27
LSM4-203ENST00000593829 PEX10O60683 326 aa22.97■■□□□ 1.27
LSM4-203ENST00000593829 ECM2O94769 699 aaPredicted RBP22.97■■□□□ 1.27
LSM4-203ENST00000593829 FMNL1O95466 1100 aaPredicted RBP22.97■■□□□ 1.27
LSM4-203ENST00000593829 FCGRTP55899 365 aa22.97■■□□□ 1.27
LSM4-203ENST00000593829 SART3Q15020 963 aaKnown RBP22.97■■□□□ 1.27
LSM4-203ENST00000593829 TSGA10IPQ3SY00 556 aa22.97■■□□□ 1.27
LSM4-203ENST00000593829 MB21D1Q8N884 522 aa22.97■■□□□ 1.27
LSM4-203ENST00000593829 DCAF4Q8WV16 495 aa22.97■■□□□ 1.27
LSM4-203ENST00000593829 CHMP4CQ96CF2 233 aa22.97■■□□□ 1.27
LSM4-203ENST00000593829 ATG4CQ96DT6 458 aa22.97■■□□□ 1.27
LSM4-203ENST00000593829 FEM1BQ9UK73 627 aa22.97■■□□□ 1.27
LSM4-203ENST00000593829 CNMDO75829 334 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 GNRH1P01148 92 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 PRPF38AQ8NAV1 312 aaKnown RBP22.96■■□□□ 1.27
LSM4-203ENST00000593829 TRIM47Q96LD4 638 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 ERICH2A1L162 156 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 IFIT3O14879 490 aaKnown RBP22.96■■□□□ 1.27
LSM4-203ENST00000593829 CTGFP29279 349 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 HSPA4P34932 840 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 KRT32Q14532 448 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 SEC23AQ15436 765 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 PKN2Q16513 984 aaKnown RBP22.96■■□□□ 1.27
LSM4-203ENST00000593829 Q3C1V9 767 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 IFIT1BQ5T764 474 aaKnown RBP22.96■■□□□ 1.27
LSM4-203ENST00000593829 RASEFQ8IZ41 740 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 BTBD7Q9P203 1132 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 ADAMTS5Q9UNA0 930 aa22.96■■□□□ 1.27
LSM4-203ENST00000593829 RLFQ13129 1914 aa22.95■■□□□ 1.26
LSM4-203ENST00000593829 TMEM232C9JQI7 657 aa22.95■■□□□ 1.26
LSM4-203ENST00000593829 MCM5P33992 734 aa22.95■■□□□ 1.26
LSM4-203ENST00000593829 CCNA1P78396 465 aa22.95■■□□□ 1.26
LSM4-203ENST00000593829 CCDC96Q2M329 555 aa22.95■■□□□ 1.26
LSM4-203ENST00000593829 CHST3Q7LGC8 479 aa22.95■■□□□ 1.26
LSM4-203ENST00000593829 PNMA1Q8ND90 353 aa22.95■■□□□ 1.26
LSM4-203ENST00000593829 KCNB2Q92953 911 aa22.95■■□□□ 1.26
LSM4-203ENST00000593829 ANTXR2P58335 489 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 KCTD1Q719H9 257 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 CHURC1Q8WUH1 139 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 VWA5AO00534 786 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 PDHBP11177 359 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 STAT2P52630 851 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 RASGRP2Q7LDG7 609 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 FAM160B2Q86V87 743 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 CCAR1Q8IX12 1150 aaKnown RBP22.94■■□□□ 1.26
LSM4-203ENST00000593829 NEK1Q96PY6 1258 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 MTA3Q9BTC8 594 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 USP26Q9BXU7 913 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 MCOLN1Q9GZU1 580 aa22.94■■□□□ 1.26
LSM4-203ENST00000593829 TNPO2O14787 897 aaKnown RBP22.93■■□□□ 1.26
LSM4-203ENST00000593829 PRC1O43663 620 aa22.93■■□□□ 1.26
LSM4-203ENST00000593829 PLA2G6O60733 806 aa22.93■■□□□ 1.26
LSM4-203ENST00000593829 EIF5BO60841 1220 aaKnown RBP22.93■■□□□ 1.26
LSM4-203ENST00000593829 HOXD10P28358 340 aa22.93■■□□□ 1.26
LSM4-203ENST00000593829 IKQ13123 557 aaPredicted RBP22.93■■□□□ 1.26
LSM4-203ENST00000593829 KIFC2Q96AC6 838 aa22.93■■□□□ 1.26
LSM4-203ENST00000593829 PARP14Q460N5 1801 aa22.93■■□□□ 1.26
LSM4-203ENST00000593829 SNHG28P0DPA3 235 aa22.92■■□□□ 1.26
LSM4-203ENST00000593829 MAPK4P31152 587 aa22.92■■□□□ 1.26
LSM4-203ENST00000593829 WTAPQ15007 396 aa22.92■■□□□ 1.26
LSM4-203ENST00000593829 TMEM67Q5HYA8 995 aa22.92■■□□□ 1.26
LSM4-203ENST00000593829 TNS4Q8IZW8 715 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms