RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ARHGEF10LQ9HCE6 1279 aa12.85□□□□□ -0.35
USE1-203ENST00000593597 EPB41L4AQ9HCS5 686 aaPredicted RBP12.85□□□□□ -0.35
USE1-203ENST00000593597 HOXC10Q9NYD6 342 aa12.85□□□□□ -0.35
USE1-203ENST00000593597 ZNF214Q9UL59 606 aaPredicted RBP12.85□□□□□ -0.35
USE1-203ENST00000593597 SLC4A4Q9Y6R1 1079 aa12.85□□□□□ -0.35
USE1-203ENST00000593597 STRNO43815 780 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 RTP1P59025 263 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 PLS1Q14651 629 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 GPR153Q6NV75 609 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 DPP9Q86TI2 863 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 NCAPG2Q86XI2 1143 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 DEFB123Q8N688 67 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 MB21D1Q8N884 522 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 OSBP2Q969R2 916 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 NUP88Q99567 741 aaPredicted RBP12.84□□□□□ -0.35
USE1-203ENST00000593597 LRRCC1Q9C099 1032 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 MTMR10Q9NXD2 777 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 PRUNE2Q8WUY3 3088 aa12.84□□□□□ -0.35
USE1-203ENST00000593597 GSG1L2A8MUP6 293 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 SEPT4O43236 478 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 MSCO60682 206 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 PGK2P07205 417 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 TAL1P17542 331 aaPredicted RBP12.83□□□□□ -0.36
USE1-203ENST00000593597 RASA1P20936 1047 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 SNX17Q15036 470 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 FAM83BQ5T0W9 1011 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 SAMD1Q6SPF0 538 aaPredicted RBP12.83□□□□□ -0.36
USE1-203ENST00000593597 ABRAQ8N0Z2 381 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 CCDC17Q96LX7 622 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.83□□□□□ -0.36
USE1-203ENST00000593597 MROH8Q9H579 483 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 PPP1R9AQ9ULJ8 1098 aa12.83□□□□□ -0.36
USE1-203ENST00000593597 IGKV6D-41A0A0C4DH26 115 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 M0R2C6 588 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 VWA5AO00534 786 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 LRRC41Q15345 812 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 ZNF792Q3KQV3 632 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 TRIM60Q495X7 471 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 SBK1Q52WX2 424 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 SLC39A5Q6ZMH5 540 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 RIOX2Q8IUF8 465 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 STK11IPQ8N1F8 1099 aa12.82□□□□□ -0.36
USE1-203ENST00000593597 LENG1Q96BZ8 264 aaPredicted RBP12.82□□□□□ -0.36
USE1-203ENST00000593597 SPTBN5Q9NRC6 3674 aaKnown RBP12.82□□□□□ -0.36
USE1-203ENST00000593597 VCANP13611 3396 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 SH3RF1Q7Z6J0 888 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 KBTBD3Q8NAB2 608 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 FGD4Q96M96 766 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 DCTPP1Q9H773 170 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 SH2D4AQ9H788 454 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 KANSL2Q9H9L4 492 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 PDLIM7Q9NR12 457 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 ECHDC1Q9NTX5 307 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 ARPP21Q9UBL0 812 aaPredicted RBP12.81□□□□□ -0.36
USE1-203ENST00000593597 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 RIPK3Q9Y572 518 aa12.81□□□□□ -0.36
USE1-203ENST00000593597 TRIM43BA6NCK2 446 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 SLC25A27O95847 323 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 NDUFB10O96000 172 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 ZNF865P0CJ78 1059 aaPredicted RBP12.8□□□□□ -0.36
USE1-203ENST00000593597 FCER1AP12319 257 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 ITGB8P26012 769 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 ADCYAP1R1P41586 468 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 C9orf50Q5SZB4 431 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 SLC17A8Q8NDX2 589 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 OTUD7AQ8TE49 926 aaPredicted RBP12.8□□□□□ -0.36
USE1-203ENST00000593597 FERMT2Q96AC1 680 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 TRIM43Q96BQ3 446 aaPredicted RBP12.8□□□□□ -0.36
USE1-203ENST00000593597 GUCD1Q96NT3 240 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 MMP19Q99542 508 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 CHD9Q3L8U1 2897 aa12.8□□□□□ -0.36
USE1-203ENST00000593597 POTEB2H3BUK9 544 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 FOXP2O15409 715 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 GPAA1O43292 621 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 PRDM1O75626 825 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 STAT3P40763 770 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 IRX5P78411 483 aaPredicted RBP12.79□□□□□ -0.36
USE1-203ENST00000593597 ZSCAN25Q6NSZ9 544 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 APPBP2Q92624 585 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 SEC62Q99442 399 aaKnown RBP12.79□□□□□ -0.36
USE1-203ENST00000593597 TINF2Q9BSI4 451 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 STXBP5LQ9Y2K9 1186 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
USE1-203ENST00000593597 DNAJC25-GNG10A0A024R161 153 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 MINDY4BA8MYZ0 360 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 KBTBD13C9JR72 458 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 F5H6K3 240 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 RNF113AO15541 343 aaKnown RBP12.78□□□□□ -0.36
USE1-203ENST00000593597 ADCY6O43306 1168 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 ADAMTS4O75173 837 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 PGK1P00558 417 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 MYCNP04198 464 aaPredicted RBP12.78□□□□□ -0.36
USE1-203ENST00000593597 KLRC3Q07444 240 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 SHHQ15465 462 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 ARRDC4Q8NCT1 418 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 PI4K2BQ8TCG2 481 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 BADQ92934 168 aa12.78□□□□□ -0.36
USE1-203ENST00000593597 SLF1Q9BQI6 1058 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms