RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 SPZ1Q9BXG8 430 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
CACNA1A-213ENST00000593267 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 RASSF10A6NK89 507 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 KLRF2D3W0D1 207 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 UBE2Q2LH0YL09 131 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 F13A1P00488 732 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 INPP5BP32019 993 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 LBX1P52954 281 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 PKN1Q16512 942 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 SLC35G1Q2M3R5 365 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 NOL9Q5SY16 702 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 GPATCH4Q5T3I0 446 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 USP48Q86UV5 1035 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 SCYL3Q8IZE3 742 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 CCDC82Q8N4S0 544 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 GMCL1Q96IK5 515 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 WRNIP1Q96S55 665 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 ALG1Q9BT22 464 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 SH2D4AQ9H788 454 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 WBP1LQ9NX94 342 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 RBM27Q9P2N5 1060 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 MTMR7Q9Y216 660 aa13.37□□□□□ -0.27
CACNA1A-213ENST00000593267 CYTH3O43739 400 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 GOLGA8HP0CJ92 632 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 ECE1P42892 770 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 SLFN13Q68D06 897 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 DLK2Q6UY11 383 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 FBXO18Q8NFZ0 1043 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 ACER1Q8TDN7 264 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 CDCA5Q96FF9 252 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 C8orf76Q96K31 380 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 AIFM3Q96NN9 605 aa13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 FRMPD2Q68DX3 1309 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-213ENST00000593267 F5H6K3 240 aa13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 H3BQV1 296 aa13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 USP2O75604 605 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 NDUFB10O96000 172 aa13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 AKAP17AQ02040 695 aaKnown RBP13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 MAP2K1Q02750 393 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 KLRC3Q07444 240 aa13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 GLIS2Q9BZE0 524 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 RIOX1Q9H6W3 641 aa13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 VCPKMTQ9H867 229 aa13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 GOPCQ9HD26 462 aa13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 FZD1Q9UP38 647 aa13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 V9GY48 417 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-213ENST00000593267 PPP1R12BO60237 982 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 SCG2P13521 617 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 NF2P35240 595 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 SLC1A4P43007 532 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 FOSBP53539 338 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 RESTQ13127 1097 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 MAP3K11Q16584 847 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 PFKFB3Q16875 520 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 CCDC96Q2M329 555 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 FOXD4L5Q5VV16 416 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 CCDC84Q86UT8 332 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 FOXD4L4Q8WXT5 416 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 BEGAINQ9BUH8 593 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 WDR18Q9BV38 432 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 PARP14Q460N5 1801 aa13.34□□□□□ -0.27
CACNA1A-213ENST00000593267 TRPM7Q96QT4 1865 aa13.33□□□□□ -0.27
CACNA1A-213ENST00000593267 PTPRFP10586 1907 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 HSPA8P11142 646 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 PTPRAP18433 802 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 GRM1Q13255 1194 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 KIAA1755Q5JYT7 1200 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 KRT40Q6A162 431 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 BTNL9Q6UXG8 535 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 KCTD1Q719H9 257 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 SHISA4Q96DD7 197 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 CPVLQ9H3G5 476 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 ZSCAN16Q9H4T2 348 aaPredicted RBP13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 AS3MTQ9HBK9 375 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 GPCPD1Q9NPB8 672 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 PICK1Q9NRD5 415 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 GJB4Q9NTQ9 266 aa13.33□□□□□ -0.28
CACNA1A-213ENST00000593267 LOC285556D6RIA3 1793 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 hCG_1642624A0A1W2PR95 340 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 MMP1P03956 469 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 BMP3P12645 472 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 XBP1P17861 261 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 IREB2P48200 963 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 MAP3K9P80192 1104 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 GUCY1B3Q02153 619 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 TRIM29Q14134 588 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 OTUD7BQ6GQQ9 843 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 FAM177A1Q8N128 213 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-213ENST00000593267 LPAR1Q92633 364 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms