RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GLRX3O76003 335 aaKnown RBP15.83■□□□□ 0.12
H3F3B-213ENST00000593254 AKR1B1P15121 316 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 ATN1P54259 1190 aaPredicted RBP15.83■□□□□ 0.12
H3F3B-213ENST00000593254 RTP1P59025 263 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 SHHQ15465 462 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 MFSD14CQ5VZR4 134 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 LBX2Q6XYB7 198 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 CCAR1Q8IX12 1150 aaKnown RBP15.83■□□□□ 0.12
H3F3B-213ENST00000593254 CCDC17Q96LX7 622 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 TTYH1Q9H313 450 aaPredicted RBP15.83■□□□□ 0.12
H3F3B-213ENST00000593254 ARPP21Q9UBL0 812 aaPredicted RBP15.83■□□□□ 0.12
H3F3B-213ENST00000593254 RABGAP1Q9Y3P9 1069 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 SALL3Q9BXA9 1300 aa15.83■□□□□ 0.12
H3F3B-213ENST00000593254 A0A0G2JMZ2 1700 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 GSG1L2A8MUP6 293 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 HOXC6P09630 235 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 MX1P20591 662 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 HDAC1Q13547 482 aaPredicted RBP15.82■□□□□ 0.12
H3F3B-213ENST00000593254 C9orf50Q5SZB4 431 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 GIMAP6Q6P9H5 292 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 SIAH1Q8IUQ4 282 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 RPAP3Q9H6T3 665 aaPredicted RBP15.82■□□□□ 0.12
H3F3B-213ENST00000593254 PRKAG2Q9UGJ0 569 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 BDP1A6H8Y1 2624 aa15.82■□□□□ 0.12
H3F3B-213ENST00000593254 SLC15A5A6NIM6 579 aa15.81■□□□□ 0.12
H3F3B-213ENST00000593254 SPDYE16A6NNV3 312 aaPredicted RBP15.81■□□□□ 0.12
H3F3B-213ENST00000593254 GPAA1O43292 621 aa15.81■□□□□ 0.12
H3F3B-213ENST00000593254 SMAD3P84022 425 aaKnown RBP15.81■□□□□ 0.12
H3F3B-213ENST00000593254 ICA1Q05084 483 aa15.81■□□□□ 0.12
H3F3B-213ENST00000593254 LRRFIP1Q32MZ4 808 aaKnown RBP15.81■□□□□ 0.12
H3F3B-213ENST00000593254 SBK1Q52WX2 424 aa15.81■□□□□ 0.12
H3F3B-213ENST00000593254 CLEC10AQ8IUN9 316 aa15.81■□□□□ 0.12
H3F3B-213ENST00000593254 TRPV1Q8NER1 839 aa15.81■□□□□ 0.12
H3F3B-213ENST00000593254 ROBO3Q96MS0 1386 aa15.81■□□□□ 0.12
H3F3B-213ENST00000593254 PTPREP23469 700 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 CCNA1P78396 465 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 AAMPQ13685 434 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 GRB14Q14449 540 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 SNX17Q15036 470 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 KIAA1755Q5JYT7 1200 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 MYLIPQ8WY64 445 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 ARHGEF10LQ9HCE6 1279 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 EPB41L4AQ9HCS5 686 aaPredicted RBP15.8■□□□□ 0.12
H3F3B-213ENST00000593254 TMX2Q9Y320 296 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 CHD9Q3L8U1 2897 aa15.8■□□□□ 0.12
H3F3B-213ENST00000593254 MYH4Q9Y623 1939 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 M0R2C6 588 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 CYBAP13498 195 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 GNAT2P19087 354 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 ANKRD45Q5TZF3 282 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 SLC39A5Q6ZMH5 540 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 NPLOC4Q8TAT6 608 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 SYMPKQ92797 1274 aaKnown RBP15.79■□□□□ 0.12
H3F3B-213ENST00000593254 SH2D4AQ9H788 454 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 VCPKMTQ9H867 229 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 BTBD7Q9P203 1132 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 ATP11BQ9Y2G3 1177 aa15.79■□□□□ 0.12
H3F3B-213ENST00000593254 COL11A1P12107 1806 aaPredicted RBP15.78■□□□□ 0.12
H3F3B-213ENST00000593254 ZNF236Q9UL36 1845 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 CNGA1P29973 690 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 CYP2C19P33261 490 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 ATP2B2Q01814 1243 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 COG2Q14746 738 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 GJC2Q5T442 439 aaPredicted RBP15.78■□□□□ 0.12
H3F3B-213ENST00000593254 BADQ92934 168 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 FSD1Q9BTV5 496 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 TANGO6Q9C0B7 1094 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 KANSL2Q9H9L4 492 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 CWC22Q9HCG8 908 aaKnown RBP15.78■□□□□ 0.12
H3F3B-213ENST00000593254 HOXC10Q9NYD6 342 aa15.78■□□□□ 0.12
H3F3B-213ENST00000593254 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
H3F3B-213ENST00000593254 MYO9BQ13459 2157 aa15.77■□□□□ 0.12
H3F3B-213ENST00000593254 TMEM265A0A087WTH1 108 aa15.77■□□□□ 0.12
H3F3B-213ENST00000593254 EEF2P13639 858 aaKnown RBP15.77■□□□□ 0.12
H3F3B-213ENST00000593254 FOSL2P15408 326 aa15.77■□□□□ 0.12
H3F3B-213ENST00000593254 RASA1P20936 1047 aa15.77■□□□□ 0.12
H3F3B-213ENST00000593254 ZMYM1Q5SVZ6 1142 aa15.77■□□□□ 0.12
H3F3B-213ENST00000593254 C1orf53Q5VUE5 145 aa15.77■□□□□ 0.12
H3F3B-213ENST00000593254 ARRDC4Q8NCT1 418 aa15.77■□□□□ 0.12
H3F3B-213ENST00000593254 SEC62Q99442 399 aaKnown RBP15.77■□□□□ 0.12
H3F3B-213ENST00000593254 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.77■□□□□ 0.12
H3F3B-213ENST00000593254 PDLIM7Q9NR12 457 aa15.77■□□□□ 0.12
H3F3B-213ENST00000593254 XIRP2A4UGR9 3374 aa15.77■□□□□ 0.11
H3F3B-213ENST00000593254 MINDY4BA8MYZ0 360 aa15.76■□□□□ 0.11
H3F3B-213ENST00000593254 PATL2C9JE40 543 aaKnown RBP15.76■□□□□ 0.11
H3F3B-213ENST00000593254 WDR46O15213 610 aaKnown RBP15.76■□□□□ 0.11
H3F3B-213ENST00000593254 TDO2P48775 406 aa15.76■□□□□ 0.11
H3F3B-213ENST00000593254 SPICE1Q8N0Z3 855 aa15.76■□□□□ 0.11
H3F3B-213ENST00000593254 IVNS1ABPQ9Y6Y0 642 aa15.76■□□□□ 0.11
H3F3B-213ENST00000593254 SMCHD1A6NHR9 2005 aa15.76■□□□□ 0.11
H3F3B-213ENST00000593254 ZNFX1Q9P2E3 1918 aaKnown RBP15.76■□□□□ 0.11
H3F3B-213ENST00000593254 TRIM43BA6NCK2 446 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 APPP05067 770 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 PDE1AP54750 535 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 TRIM60Q495X7 471 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 WDR78Q5VTH9 848 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 OLFML2BQ68BL8 750 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 SH3RF1Q7Z6J0 888 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 IFNL3Q8IZI9 196 aa15.75■□□□□ 0.11
H3F3B-213ENST00000593254 MB21D1Q8N884 522 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms