RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 HAUS7Q99871 368 aa21.05■□□□□ 0.96
RETREG3-212ENST00000593251 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.05■□□□□ 0.96
RETREG3-212ENST00000593251 FBXO28Q9NVF7 368 aa21.05■□□□□ 0.96
RETREG3-212ENST00000593251 SLC5A4Q9NY91 659 aa21.05■□□□□ 0.96
RETREG3-212ENST00000593251 GREB1LQ9C091 1923 aaPredicted RBP21.04■□□□□ 0.96
RETREG3-212ENST00000593251 RAD21O60216 631 aa21.04■□□□□ 0.96
RETREG3-212ENST00000593251 EEF2P13639 858 aaKnown RBP21.04■□□□□ 0.96
RETREG3-212ENST00000593251 C16orf86Q6ZW13 317 aa21.04■□□□□ 0.96
RETREG3-212ENST00000593251 AMOTL1Q8IY63 956 aa21.04■□□□□ 0.96
RETREG3-212ENST00000593251 FERMT2Q96AC1 680 aa21.04■□□□□ 0.96
RETREG3-212ENST00000593251 CCDC17Q96LX7 622 aa21.04■□□□□ 0.96
RETREG3-212ENST00000593251 SLC4A4Q9Y6R1 1079 aa21.04■□□□□ 0.96
RETREG3-212ENST00000593251 FCER1AP12319 257 aa21.03■□□□□ 0.96
RETREG3-212ENST00000593251 ADCYAP1R1P41586 468 aa21.03■□□□□ 0.96
RETREG3-212ENST00000593251 TRIM60Q495X7 471 aa21.03■□□□□ 0.96
RETREG3-212ENST00000593251 FAM47AQ5JRC9 791 aa21.03■□□□□ 0.96
RETREG3-212ENST00000593251 ABRAQ8N0Z2 381 aa21.03■□□□□ 0.96
RETREG3-212ENST00000593251 FAM161BQ96MY7 647 aa21.03■□□□□ 0.96
RETREG3-212ENST00000593251 PRDM5Q9NQX1 630 aaPredicted RBP21.03■□□□□ 0.96
RETREG3-212ENST00000593251 MYH4Q9Y623 1939 aa21.03■□□□□ 0.96
RETREG3-212ENST00000593251 UNC80Q8N2C7 3258 aa21.03■□□□□ 0.96
RETREG3-212ENST00000593251 SMARCA5O60264 1052 aaPredicted RBP21.02■□□□□ 0.96
RETREG3-212ENST00000593251 PGK2P07205 417 aa21.02■□□□□ 0.96
RETREG3-212ENST00000593251 LRRC41Q15345 812 aa21.02■□□□□ 0.96
RETREG3-212ENST00000593251 UBE3CQ15386 1083 aa21.02■□□□□ 0.96
RETREG3-212ENST00000593251 CTR9Q6PD62 1173 aa21.02■□□□□ 0.96
RETREG3-212ENST00000593251 PUS7LQ9H0K6 701 aaKnown RBP21.02■□□□□ 0.96
RETREG3-212ENST00000593251 POTEB2H3BUK9 544 aa21.01■□□□□ 0.95
RETREG3-212ENST00000593251 SLC25A27O95847 323 aa21.01■□□□□ 0.95
RETREG3-212ENST00000593251 FAM83BQ5T0W9 1011 aa21.01■□□□□ 0.95
RETREG3-212ENST00000593251 DIEXFQ68CQ4 756 aaKnown RBP21.01■□□□□ 0.95
RETREG3-212ENST00000593251 STK11IPQ8N1F8 1099 aa21.01■□□□□ 0.95
RETREG3-212ENST00000593251 DDRGK1Q96HY6 314 aa21.01■□□□□ 0.95
RETREG3-212ENST00000593251 MMP19Q99542 508 aa21.01■□□□□ 0.95
RETREG3-212ENST00000593251 ADAMTS5Q9UNA0 930 aa21.01■□□□□ 0.95
RETREG3-212ENST00000593251 SHHQ15465 462 aa21■□□□□ 0.95
RETREG3-212ENST00000593251 C9orf50Q5SZB4 431 aa21■□□□□ 0.95
RETREG3-212ENST00000593251 SH3RF1Q7Z6J0 888 aa21■□□□□ 0.95
RETREG3-212ENST00000593251 BADQ92934 168 aa21■□□□□ 0.95
RETREG3-212ENST00000593251 GUCD1Q96NT3 240 aa21■□□□□ 0.95
RETREG3-212ENST00000593251 KANSL2Q9H9L4 492 aa21■□□□□ 0.95
RETREG3-212ENST00000593251 VWA5AO00534 786 aa20.99■□□□□ 0.95
RETREG3-212ENST00000593251 TAL1P17542 331 aaPredicted RBP20.99■□□□□ 0.95
RETREG3-212ENST00000593251 SNX17Q15036 470 aa20.99■□□□□ 0.95
RETREG3-212ENST00000593251 RIOX2Q8IUF8 465 aa20.99■□□□□ 0.95
RETREG3-212ENST00000593251 GOPCQ9HD26 462 aa20.99■□□□□ 0.95
RETREG3-212ENST00000593251 PDLIM7Q9NR12 457 aa20.99■□□□□ 0.95
RETREG3-212ENST00000593251 PPP1R9AQ9ULJ8 1098 aa20.99■□□□□ 0.95
RETREG3-212ENST00000593251 STAT3P40763 770 aa20.98■□□□□ 0.95
RETREG3-212ENST00000593251 KCTD2Q14681 263 aa20.98■□□□□ 0.95
RETREG3-212ENST00000593251 FAM109BQ6ICB4 259 aaPredicted RBP20.98■□□□□ 0.95
RETREG3-212ENST00000593251 ZSCAN25Q6NSZ9 544 aa20.98■□□□□ 0.95
RETREG3-212ENST00000593251 NUP88Q99567 741 aaPredicted RBP20.98■□□□□ 0.95
RETREG3-212ENST00000593251 TINF2Q9BSI4 451 aa20.98■□□□□ 0.95
RETREG3-212ENST00000593251 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.98■□□□□ 0.95
RETREG3-212ENST00000593251 LRRCC1Q9C099 1032 aa20.98■□□□□ 0.95
RETREG3-212ENST00000593251 XPNPEP3Q9NQH7 507 aa20.98■□□□□ 0.95
RETREG3-212ENST00000593251 ZNF214Q9UL59 606 aaPredicted RBP20.98■□□□□ 0.95
RETREG3-212ENST00000593251 MCM3APO60318 1980 aa20.97■□□□□ 0.95
RETREG3-212ENST00000593251 EYSQ5T1H1 3165 aa20.97■□□□□ 0.95
RETREG3-212ENST00000593251 TRIM43BA6NCK2 446 aa20.97■□□□□ 0.95
RETREG3-212ENST00000593251 PGK1P00558 417 aa20.97■□□□□ 0.95
RETREG3-212ENST00000593251 ZNF792Q3KQV3 632 aa20.97■□□□□ 0.95
RETREG3-212ENST00000593251 REPS2Q8NFH8 660 aa20.97■□□□□ 0.95
RETREG3-212ENST00000593251 TRIM43Q96BQ3 446 aaPredicted RBP20.97■□□□□ 0.95
RETREG3-212ENST00000593251 LENG1Q96BZ8 264 aaPredicted RBP20.97■□□□□ 0.95
RETREG3-212ENST00000593251 RARBP10826 455 aa20.96■□□□□ 0.95
RETREG3-212ENST00000593251 TLE2Q04725 743 aa20.96■□□□□ 0.95
RETREG3-212ENST00000593251 C20orf194Q5TEA3 1177 aa20.96■□□□□ 0.95
RETREG3-212ENST00000593251 ZNF697Q5TEC3 545 aa20.96■□□□□ 0.95
RETREG3-212ENST00000593251 STRBPQ96SI9 672 aaKnown RBP20.96■□□□□ 0.95
RETREG3-212ENST00000593251 ARPP21Q9UBL0 812 aaPredicted RBP20.96■□□□□ 0.95
RETREG3-212ENST00000593251 RASA1P20936 1047 aa20.95■□□□□ 0.94
RETREG3-212ENST00000593251 CHMP4BQ9H444 224 aaKnown RBP20.95■□□□□ 0.94
RETREG3-212ENST00000593251 NRBP1Q9UHY1 535 aa20.95■□□□□ 0.94
RETREG3-212ENST00000593251 PHF24Q9UPV7 400 aa20.95■□□□□ 0.94
RETREG3-212ENST00000593251 CUL9Q8IWT3 2517 aa20.95■□□□□ 0.94
RETREG3-212ENST00000593251 GSG1L2A8MUP6 293 aa20.94■□□□□ 0.94
RETREG3-212ENST00000593251 MINDY4BA8MYZ0 360 aa20.94■□□□□ 0.94
RETREG3-212ENST00000593251 ZNF865P0CJ78 1059 aaPredicted RBP20.94■□□□□ 0.94
RETREG3-212ENST00000593251 SLC4A3P48751 1232 aa20.94■□□□□ 0.94
RETREG3-212ENST00000593251 TSHZ3Q63HK5 1081 aa20.94■□□□□ 0.94
RETREG3-212ENST00000593251 SLF1Q9BQI6 1058 aa20.94■□□□□ 0.94
RETREG3-212ENST00000593251 RCAN3Q9UKA8 241 aa20.94■□□□□ 0.94
RETREG3-212ENST00000593251 DIS3Q9Y2L1 958 aaKnown RBP20.94■□□□□ 0.94
RETREG3-212ENST00000593251 ITGB8P26012 769 aa20.93■□□□□ 0.94
RETREG3-212ENST00000593251 SBK1Q52WX2 424 aa20.93■□□□□ 0.94
RETREG3-212ENST00000593251 C1orf53Q5VUE5 145 aa20.93■□□□□ 0.94
RETREG3-212ENST00000593251 SNRNP48Q6IEG0 339 aaKnown RBP20.93■□□□□ 0.94
RETREG3-212ENST00000593251 RNF180Q86T96 592 aa20.93■□□□□ 0.94
RETREG3-212ENST00000593251 MKNK2Q9HBH9 465 aa20.93■□□□□ 0.94
RETREG3-212ENST00000593251 ECHDC1Q9NTX5 307 aa20.93■□□□□ 0.94
RETREG3-212ENST00000593251 RIPK3Q9Y572 518 aa20.93■□□□□ 0.94
RETREG3-212ENST00000593251 A0A1W2PQ45 241 aaPredicted RBP20.92■□□□□ 0.94
RETREG3-212ENST00000593251 A0A1W2PQY0 241 aa20.92■□□□□ 0.94
RETREG3-212ENST00000593251 F5H6K3 240 aa20.92■□□□□ 0.94
RETREG3-212ENST00000593251 AKR1A1P14550 325 aa20.92■□□□□ 0.94
RETREG3-212ENST00000593251 KLRC3Q07444 240 aa20.92■□□□□ 0.94
RETREG3-212ENST00000593251 OSBP2Q969R2 916 aa20.92■□□□□ 0.94
RETREG3-212ENST00000593251 CNPY2Q9Y2B0 182 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms