RNA–Protein interactions for RNA: ENST00000593111.1

PSME3-216, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-216ENST00000593111 LRRC41Q15345 812 aa21.04■□□□□ 0.96
PSME3-216ENST00000593111 SHHQ15465 462 aa21.04■□□□□ 0.96
PSME3-216ENST00000593111 BADQ92934 168 aa21.04■□□□□ 0.96
PSME3-216ENST00000593111 GUCD1Q96NT3 240 aa21.04■□□□□ 0.96
PSME3-216ENST00000593111 MMP19Q99542 508 aa21.04■□□□□ 0.96
PSME3-216ENST00000593111 ZNF236Q9UL36 1845 aa21.04■□□□□ 0.96
PSME3-216ENST00000593111 PGK2P07205 417 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 ATP5JP18859 108 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 FAM47AQ5JRC9 791 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 ZNF697Q5TEC3 545 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 SIRT2Q8IXJ6 389 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 MIER1Q8N108 512 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 KANSL2Q9H9L4 492 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 FBXO28Q9NVF7 368 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 COG6Q9Y2V7 657 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 SLC4A4Q9Y6R1 1079 aa21.03■□□□□ 0.96
PSME3-216ENST00000593111 MYH8P13535 1937 aa21.02■□□□□ 0.96
PSME3-216ENST00000593111 KCTD2Q14681 263 aa21.02■□□□□ 0.96
PSME3-216ENST00000593111 HAUS7Q99871 368 aa21.02■□□□□ 0.96
PSME3-216ENST00000593111 XPNPEP3Q9NQH7 507 aa21.02■□□□□ 0.96
PSME3-216ENST00000593111 A0A0G2JMZ2 1700 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 CHGBP05060 677 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 RARBP10826 455 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 STAT3P40763 770 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 TLE2Q04725 743 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 SNX17Q15036 470 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 C9orf50Q5SZB4 431 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 C16orf86Q6ZW13 317 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 SH3RF1Q7Z6J0 888 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 RIOX2Q8IUF8 465 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 GOPCQ9HD26 462 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 ZBTB40Q9NUA8 1239 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 DDX19BQ9UMR2 479 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 ADAMTS5Q9UNA0 930 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 ZNFX1Q9P2E3 1918 aaKnown RBP21.01■□□□□ 0.95
PSME3-216ENST00000593111 BAZ2AQ9UIF9 1905 aaKnown RBP21.01■□□□□ 0.95
PSME3-216ENST00000593111 UNC80Q8N2C7 3258 aa21.01■□□□□ 0.95
PSME3-216ENST00000593111 UBE3CQ15386 1083 aa21■□□□□ 0.95
PSME3-216ENST00000593111 RNF180Q86T96 592 aa21■□□□□ 0.95
PSME3-216ENST00000593111 PHF6Q8IWS0 365 aaKnown RBP eCLIP21■□□□□ 0.95
PSME3-216ENST00000593111 TINF2Q9BSI4 451 aa21■□□□□ 0.95
PSME3-216ENST00000593111 PDLIM7Q9NR12 457 aa21■□□□□ 0.95
PSME3-216ENST00000593111 TRIM43BA6NCK2 446 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 VWA5AO00534 786 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 PGK1P00558 417 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 FAM83BQ5T0W9 1011 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 ZSCAN25Q6NSZ9 544 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 CTR9Q6PD62 1173 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 TRIM43Q96BQ3 446 aaPredicted RBP20.99■□□□□ 0.95
PSME3-216ENST00000593111 NRBP1Q9UHY1 535 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 PPP1R9AQ9ULJ8 1098 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 PHF24Q9UPV7 400 aa20.99■□□□□ 0.95
PSME3-216ENST00000593111 TAL1P17542 331 aaPredicted RBP20.98■□□□□ 0.95
PSME3-216ENST00000593111 ZNF792Q3KQV3 632 aa20.98■□□□□ 0.95
PSME3-216ENST00000593111 C1orf53Q5VUE5 145 aa20.98■□□□□ 0.95
PSME3-216ENST00000593111 COL25A1Q9BXS0 654 aaPredicted RBP20.98■□□□□ 0.95
PSME3-216ENST00000593111 SEMA6BQ9H3T3 888 aa20.98■□□□□ 0.95
PSME3-216ENST00000593111 TACC3Q9Y6A5 838 aa20.98■□□□□ 0.95
PSME3-216ENST00000593111 LTBP2Q14767 1821 aa20.98■□□□□ 0.95
PSME3-216ENST00000593111 SMCHD1A6NHR9 2005 aa20.98■□□□□ 0.95
PSME3-216ENST00000593111 STK11IPQ8N1F8 1099 aa20.97■□□□□ 0.95
PSME3-216ENST00000593111 CDX2Q99626 313 aaPredicted RBP20.97■□□□□ 0.95
PSME3-216ENST00000593111 PUS7LQ9H0K6 701 aaKnown RBP20.97■□□□□ 0.95
PSME3-216ENST00000593111 CHMP4BQ9H444 224 aaKnown RBP20.97■□□□□ 0.95
PSME3-216ENST00000593111 CNPY2Q9Y2B0 182 aa20.97■□□□□ 0.95
PSME3-216ENST00000593111 DIS3Q9Y2L1 958 aaKnown RBP20.97■□□□□ 0.95
PSME3-216ENST00000593111 ZBED9Q6R2W3 1325 aa20.97■□□□□ 0.95
PSME3-216ENST00000593111 COPB2P35606 906 aa20.96■□□□□ 0.95
PSME3-216ENST00000593111 SLC4A3P48751 1232 aa20.96■□□□□ 0.95
PSME3-216ENST00000593111 NUP88Q99567 741 aaPredicted RBP20.96■□□□□ 0.95
PSME3-216ENST00000593111 MKNK2Q9HBH9 465 aa20.96■□□□□ 0.95
PSME3-216ENST00000593111 ZNF214Q9UL59 606 aaPredicted RBP20.96■□□□□ 0.95
PSME3-216ENST00000593111 COL11A1P12107 1806 aaPredicted RBP20.96■□□□□ 0.95
PSME3-216ENST00000593111 PQBP1O60828 265 aaKnown RBP20.95■□□□□ 0.94
PSME3-216ENST00000593111 CLTBP09497 229 aa20.95■□□□□ 0.94
PSME3-216ENST00000593111 AKR1A1P14550 325 aa20.95■□□□□ 0.94
PSME3-216ENST00000593111 DDX11Q96FC9 970 aa20.95■□□□□ 0.94
PSME3-216ENST00000593111 PARP14Q460N5 1801 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 A0A1W2PQ45 241 aaPredicted RBP20.94■□□□□ 0.94
PSME3-216ENST00000593111 A0A1W2PQY0 241 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 MINDY4BA8MYZ0 360 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 SMARCA5O60264 1052 aaPredicted RBP20.94■□□□□ 0.94
PSME3-216ENST00000593111 ZNF865P0CJ78 1059 aaPredicted RBP20.94■□□□□ 0.94
PSME3-216ENST00000593111 RAG1P15918 1043 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 ITGB8P26012 769 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 SMAD3P84022 425 aaKnown RBP20.94■□□□□ 0.94
PSME3-216ENST00000593111 REPS2Q8NFH8 660 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 LENG1Q96BZ8 264 aaPredicted RBP20.94■□□□□ 0.94
PSME3-216ENST00000593111 SLF1Q9BQI6 1058 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.94■□□□□ 0.94
PSME3-216ENST00000593111 LRRCC1Q9C099 1032 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 TMEM39AQ9NV64 488 aa20.94■□□□□ 0.94
PSME3-216ENST00000593111 ARPP21Q9UBL0 812 aaPredicted RBP20.94■□□□□ 0.94
PSME3-216ENST00000593111 CTDP1Q9Y5B0 961 aaPredicted RBP20.94■□□□□ 0.94
PSME3-216ENST00000593111 SNRNP48Q6IEG0 339 aaKnown RBP20.93■□□□□ 0.94
PSME3-216ENST00000593111 RNPC3Q96LT9 517 aaKnown RBP20.93■□□□□ 0.94
PSME3-216ENST00000593111 STRBPQ96SI9 672 aaKnown RBP20.93■□□□□ 0.94
PSME3-216ENST00000593111 TEX13BQ9BXU2 312 aa20.93■□□□□ 0.94
PSME3-216ENST00000593111 PLXNA1Q9UIW2 1896 aa20.92■□□□□ 0.94
PSME3-216ENST00000593111 F5H6K3 240 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms