RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 PRR29P0C7W0 189 aa22.47■■□□□ 1.19
CLIP3-206ENST00000593074 BLIDQ8IZY5 108 aa22.47■■□□□ 1.19
CLIP3-206ENST00000593074 FAM177A1Q8N128 213 aaPredicted RBP22.47■■□□□ 1.19
CLIP3-206ENST00000593074 TRIML1Q8N9V2 468 aa22.47■■□□□ 1.19
CLIP3-206ENST00000593074 CNKSR1Q969H4 720 aa22.47■■□□□ 1.19
CLIP3-206ENST00000593074 LZTS2Q9BRK4 669 aa22.47■■□□□ 1.19
CLIP3-206ENST00000593074 MXD3Q9BW11 206 aa22.47■■□□□ 1.19
CLIP3-206ENST00000593074 OSBPL5Q9H0X9 879 aaPredicted RBP22.47■■□□□ 1.19
CLIP3-206ENST00000593074 A0A087X0B3 334 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 ADAMTS3O15072 1205 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 CYTH3O43739 400 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 MYO1BO43795 1136 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 NOVP48745 357 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 PTGDRQ13258 359 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 PDILTQ8N807 584 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 SYMPKQ92797 1274 aaKnown RBP22.46■■□□□ 1.19
CLIP3-206ENST00000593074 IFNKQ9P0W0 207 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 PCDHA4Q9UN74 947 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 PLIN4Q96Q06 1357 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 GSDMDP57764 484 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 MORC3Q14149 939 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 DAGLBQ8NCG7 672 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 GPKOWQ92917 476 aaPredicted RBP eCLIP22.46■■□□□ 1.19
CLIP3-206ENST00000593074 SMARCE1Q969G3 411 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 EPSTI1Q96J88 318 aa22.46■■□□□ 1.19
CLIP3-206ENST00000593074 M0R2N6 131 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 SMC2O95347 1197 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 LMOD1P29536 600 aaPredicted RBP22.45■■□□□ 1.18
CLIP3-206ENST00000593074 CHRNA5P30532 468 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 HHIPL2Q6UWX4 724 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 SPZ1Q9BXG8 430 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 DBNDD1Q9H9R9 158 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 USP40Q9NVE5 1235 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 SLFN14P0C7P3 912 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 SCNN1DP51172 638 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 PICALMQ13492 652 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 GALNT17Q6IS24 598 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 TYW1BQ6NUM6 668 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 FILIP1Q7Z7B0 1213 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 GRAMD1CQ8IYS0 662 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 MLKLQ8NB16 471 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 CCDC148Q8NFR7 591 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 CCDC34Q96HJ3 373 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 PRIMPOLQ96LW4 560 aa22.45■■□□□ 1.18
CLIP3-206ENST00000593074 FANCCQ00597 558 aa22.44■■□□□ 1.18
CLIP3-206ENST00000593074 ARID5BQ14865 1188 aa22.44■■□□□ 1.18
CLIP3-206ENST00000593074 WWC2Q6AWC2 1192 aa22.44■■□□□ 1.18
CLIP3-206ENST00000593074 SH3RF1Q7Z6J0 888 aa22.44■■□□□ 1.18
CLIP3-206ENST00000593074 TEKT1Q969V4 418 aa22.44■■□□□ 1.18
CLIP3-206ENST00000593074 BARHL2Q9NY43 387 aa22.44■■□□□ 1.18
CLIP3-206ENST00000593074 ZNF219Q9P2Y4 722 aaPredicted RBP22.44■■□□□ 1.18
CLIP3-206ENST00000593074 DHX58Q96C10 678 aa22.43■■□□□ 1.18
CLIP3-206ENST00000593074 DACH1Q9UI36 760 aa22.43■■□□□ 1.18
CLIP3-206ENST00000593074 STXBP3O00186 592 aa22.43■■□□□ 1.18
CLIP3-206ENST00000593074 ATP1A3P13637 1013 aa22.43■■□□□ 1.18
CLIP3-206ENST00000593074 CEP95Q96GE4 821 aa22.43■■□□□ 1.18
CLIP3-206ENST00000593074 UQCRHLA0A096LP55 91 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 VWA3AA6NCI4 1184 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 UQCRHP07919 91 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 TOP1P11387 765 aaKnown RBP22.42■■□□□ 1.18
CLIP3-206ENST00000593074 CCZ1BP86790 482 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 CCZ1P86791 482 aaPredicted RBP22.42■■□□□ 1.18
CLIP3-206ENST00000593074 GABPAQ06546 454 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 ARL6IP4Q66PJ3 421 aaKnown RBP22.42■■□□□ 1.18
CLIP3-206ENST00000593074 KLRF2D3W0D1 207 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 MCM7P33993 719 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 STRIP1Q5VSL9 837 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 KCNQ5Q9NR82 932 aa22.42■■□□□ 1.18
CLIP3-206ENST00000593074 PARP1P09874 1014 aaKnown RBP22.41■■□□□ 1.18
CLIP3-206ENST00000593074 SMARCA1P28370 1054 aa22.41■■□□□ 1.18
CLIP3-206ENST00000593074 FKBP1AP62942 108 aaKnown RBP22.41■■□□□ 1.18
CLIP3-206ENST00000593074 CDC42EP5Q6NZY7 148 aa22.41■■□□□ 1.18
CLIP3-206ENST00000593074 HEATR3Q7Z4Q2 680 aa22.41■■□□□ 1.18
CLIP3-206ENST00000593074 C4orf32Q8N8J7 132 aa22.41■■□□□ 1.18
CLIP3-206ENST00000593074 PAGE5Q96GU1 130 aa22.41■■□□□ 1.18
CLIP3-206ENST00000593074 DDX4Q9NQI0 724 aaKnown RBP22.41■■□□□ 1.18
CLIP3-206ENST00000593074 C10orf71Q711Q0 1435 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 DHX8Q14562 1220 aaKnown RBP22.4■■□□□ 1.18
CLIP3-206ENST00000593074 APOBEC3HQ6NTF7 200 aaKnown RBP22.4■■□□□ 1.18
CLIP3-206ENST00000593074 RASGRP2Q7LDG7 609 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 C7orf43Q8WVR3 580 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 MRIQ9BWK5 157 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 PCDHA6Q9UN73 950 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 PCDHA8Q9Y5H6 950 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 ADAMTSL1Q8N6G6 1762 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 CBFA2T2O43439 604 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 ECE2O60344 883 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 GOLGA8HP0CJ92 632 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 SKILP12757 684 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 CRKP46108 304 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 IL17AQ16552 155 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 CC2D2BQ6DHV5 1058 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 CCDC150Q8NCX0 1101 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 PYM1Q9BRP8 204 aaKnown RBP22.4■■□□□ 1.18
CLIP3-206ENST00000593074 FANCLQ9NW38 375 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 MTMR7Q9Y216 660 aa22.4■■□□□ 1.18
CLIP3-206ENST00000593074 E2F4Q16254 413 aa22.39■■□□□ 1.17
CLIP3-206ENST00000593074 TMC6Q7Z403 805 aa22.39■■□□□ 1.17
CLIP3-206ENST00000593074 MYRIPQ8NFW9 859 aa22.39■■□□□ 1.17
CLIP3-206ENST00000593074 ENOX1Q8TC92 643 aaKnown RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms