RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 MAP3K21Q5TCX8 1036 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 TRMT44Q8IYL2 757 aaKnown RBP16.52■□□□□ 0.24
APOC1-208ENST00000592535 MB21D1Q8N884 522 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 NUP88Q99567 741 aaPredicted RBP16.52■□□□□ 0.24
APOC1-208ENST00000592535 CRISPLD2Q9H0B8 497 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 OSBPL3Q9H4L5 887 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 CLIP2Q9UDT6 1046 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 IVNS1ABPQ9Y6Y0 642 aa16.52■□□□□ 0.24
APOC1-208ENST00000592535 PLIN4Q96Q06 1357 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 F5H6K3 240 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 TSPY3P0CV98 308 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 TSPY8P0CW00 308 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 ERCC3P19447 782 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 KLRC3Q07444 240 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 FAM47AQ5JRC9 791 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 TICAM2Q86XR7 235 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 SHCBP1Q8NEM2 672 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 NEDD1Q8NHV4 660 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 FLRT1Q9NZU1 646 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 ADAMTS5Q9UNA0 930 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
APOC1-208ENST00000592535 FRMPD3Q5JV73 1810 aa16.51■□□□□ 0.23
APOC1-208ENST00000592535 NDUFB10O96000 172 aa16.5■□□□□ 0.23
APOC1-208ENST00000592535 TFAP4Q01664 338 aa16.5■□□□□ 0.23
APOC1-208ENST00000592535 CACNB2Q08289 660 aaPredicted RBP16.5■□□□□ 0.23
APOC1-208ENST00000592535 TMEM132BQ14DG7 1078 aa16.5■□□□□ 0.23
APOC1-208ENST00000592535 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
APOC1-208ENST00000592535 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
APOC1-208ENST00000592535 NPLOC4Q8TAT6 608 aa16.5■□□□□ 0.23
APOC1-208ENST00000592535 INCENPQ9NQS7 918 aa16.5■□□□□ 0.23
APOC1-208ENST00000592535 PPP1R9AQ9ULJ8 1098 aa16.5■□□□□ 0.23
APOC1-208ENST00000592535 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
APOC1-208ENST00000592535 ALPK3Q96L96 1907 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 VWA5AO00534 786 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 TTLL1O95922 423 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 HOXC6P09630 235 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 CAPN2P17655 700 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 SDSP20132 328 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 ALX1Q15699 326 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 NCAPG2Q86XI2 1143 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 MKL1Q969V6 931 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 ANAPC4Q9UJX5 808 aa16.49■□□□□ 0.23
APOC1-208ENST00000592535 CCDC171Q6TFL3 1326 aa16.48■□□□□ 0.23
APOC1-208ENST00000592535 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
APOC1-208ENST00000592535 STRNO43815 780 aa16.48■□□□□ 0.23
APOC1-208ENST00000592535 HSPD1P10809 573 aaKnown RBP16.48■□□□□ 0.23
APOC1-208ENST00000592535 ADORA2AP29274 412 aa16.48■□□□□ 0.23
APOC1-208ENST00000592535 CCND3P30281 292 aaPredicted RBP16.48■□□□□ 0.23
APOC1-208ENST00000592535 REPS2Q8NFH8 660 aa16.48■□□□□ 0.23
APOC1-208ENST00000592535 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
APOC1-208ENST00000592535 MROH8Q9H579 483 aa16.48■□□□□ 0.23
APOC1-208ENST00000592535 FGAP02671 866 aa16.47■□□□□ 0.23
APOC1-208ENST00000592535 MFSD14CQ5VZR4 134 aa16.47■□□□□ 0.23
APOC1-208ENST00000592535 DPP9Q86TI2 863 aa16.47■□□□□ 0.23
APOC1-208ENST00000592535 RIOX2Q8IUF8 465 aa16.47■□□□□ 0.23
APOC1-208ENST00000592535 DIS3LQ8TF46 1054 aaKnown RBP16.47■□□□□ 0.23
APOC1-208ENST00000592535 DPF3Q92784 378 aa16.47■□□□□ 0.23
APOC1-208ENST00000592535 PAWRQ96IZ0 340 aaKnown RBP16.47■□□□□ 0.23
APOC1-208ENST00000592535 HTATIP2Q9BUP3 242 aa16.47■□□□□ 0.23
APOC1-208ENST00000592535 ZNF214Q9UL59 606 aaPredicted RBP16.47■□□□□ 0.23
APOC1-208ENST00000592535 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
APOC1-208ENST00000592535 TSPY2A6NKD2 308 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 NMT2O60551 498 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 COBLO75128 1261 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 SLC25A27O95847 323 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 PDE4AP27815 886 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 STAT3P40763 770 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 GMCL1P1Q8NEA9 526 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 OGDHLQ9ULD0 1010 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 LAMA4Q16363 1823 aa16.46■□□□□ 0.23
APOC1-208ENST00000592535 ZMYM6O95789 1325 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 H0YGN5 161 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 ORC4O43929 436 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 RANBP6O60518 1105 aaKnown RBP16.45■□□□□ 0.22
APOC1-208ENST00000592535 IGHA2P01877 340 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 FGRP09769 529 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 FCER1AP12319 257 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 CYP2C19P33261 490 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 MNX1P50219 401 aaPredicted RBP16.45■□□□□ 0.22
APOC1-208ENST00000592535 HAND2P61296 217 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 SLFN13Q68D06 897 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 ABRAQ8N0Z2 381 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 ANKLE1Q8NAG6 615 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 PRPF38AQ8NAV1 312 aaKnown RBP16.45■□□□□ 0.22
APOC1-208ENST00000592535 IL17RBQ9NRM6 502 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 DIAPH3Q9NSV4 1193 aa16.45■□□□□ 0.22
APOC1-208ENST00000592535 OLFML2BQ68BL8 750 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 LHX8Q68G74 356 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 CWC27Q6UX04 472 aaKnown RBP16.44■□□□□ 0.22
APOC1-208ENST00000592535 NECAB2Q7Z6G3 386 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 KIFC2Q96AC6 838 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 CHMP4CQ96CF2 233 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 MMP19Q99542 508 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 NBPF3Q9H094 633 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 TOMM22Q9NS69 142 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 FEM1BQ9UK73 627 aa16.44■□□□□ 0.22
APOC1-208ENST00000592535 STX8Q9UNK0 236 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms