RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ALDH1B1P30837 517 aa22.47■■□□□ 1.19
MBD3-209ENST00000592012 SH3RF1Q7Z6J0 888 aa22.47■■□□□ 1.19
MBD3-209ENST00000592012 MLKLQ8NB16 471 aa22.47■■□□□ 1.19
MBD3-209ENST00000592012 FOCADQ5VW36 1801 aa22.47■■□□□ 1.19
MBD3-209ENST00000592012 MCM7P33993 719 aa22.47■■□□□ 1.19
MBD3-209ENST00000592012 WWC2Q6AWC2 1192 aa22.47■■□□□ 1.19
MBD3-209ENST00000592012 FANCLQ9NW38 375 aa22.47■■□□□ 1.19
MBD3-209ENST00000592012 KLRF2D3W0D1 207 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 APBA3O96018 575 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 GOLGA8HP0CJ92 632 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 SKILP12757 684 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 NOVP48745 357 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 CCZ1BP86790 482 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 CCZ1P86791 482 aaPredicted RBP22.46■■□□□ 1.19
MBD3-209ENST00000592012 CEP95Q96GE4 821 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 BARHL2Q9NY43 387 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 MYO1BO43795 1136 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 IL17AQ16552 155 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 CCDC34Q96HJ3 373 aa22.46■■□□□ 1.19
MBD3-209ENST00000592012 MMP10P09238 476 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 PDE6BP35913 854 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 DPP8Q6V1X1 898 aaPredicted RBP22.45■■□□□ 1.18
MBD3-209ENST00000592012 RASGRP2Q7LDG7 609 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 TMC6Q7Z403 805 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 C4orf32Q8N8J7 132 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 RASGRP4Q8TDF6 673 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 PAGE5Q96GU1 130 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 F8W031 263 aaPredicted RBP22.45■■□□□ 1.18
MBD3-209ENST00000592012 STXBP3O00186 592 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 GALNT17Q6IS24 598 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 DAGLBQ8NCG7 672 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 SPZ1Q9BXG8 430 aa22.45■■□□□ 1.18
MBD3-209ENST00000592012 TOP1P11387 765 aaKnown RBP22.44■■□□□ 1.18
MBD3-209ENST00000592012 UBASH3AP57075 661 aa22.44■■□□□ 1.18
MBD3-209ENST00000592012 DOK7Q18PE1 504 aa22.44■■□□□ 1.18
MBD3-209ENST00000592012 ARL6IP4Q66PJ3 421 aaKnown RBP22.44■■□□□ 1.18
MBD3-209ENST00000592012 HEATR3Q7Z4Q2 680 aa22.44■■□□□ 1.18
MBD3-209ENST00000592012 CCDC148Q8NFR7 591 aa22.44■■□□□ 1.18
MBD3-209ENST00000592012 MYRIPQ8NFW9 859 aa22.44■■□□□ 1.18
MBD3-209ENST00000592012 DACH1Q9UI36 760 aa22.44■■□□□ 1.18
MBD3-209ENST00000592012 PCDHA6Q9UN73 950 aa22.44■■□□□ 1.18
MBD3-209ENST00000592012 TTF2Q9UNY4 1162 aaKnown RBP22.44■■□□□ 1.18
MBD3-209ENST00000592012 PCDHA8Q9Y5H6 950 aa22.44■■□□□ 1.18
MBD3-209ENST00000592012 PARP1P09874 1014 aaKnown RBP22.43■■□□□ 1.18
MBD3-209ENST00000592012 AFMP43652 599 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 GABPAQ06546 454 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 FMR1Q06787 632 aaKnown RBP eCLIP22.43■■□□□ 1.18
MBD3-209ENST00000592012 FLAD1Q8NFF5 587 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 DPF2Q92785 391 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 MASTLQ96GX5 879 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 MXD3Q9BW11 206 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 CPVLQ9H3G5 476 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 SERPINC1P01008 464 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 PICALMQ13492 652 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 USP17L2Q6R6M4 530 aa22.43■■□□□ 1.18
MBD3-209ENST00000592012 FAM177A1Q8N128 213 aaPredicted RBP22.43■■□□□ 1.18
MBD3-209ENST00000592012 ENOX1Q8TC92 643 aaKnown RBP22.43■■□□□ 1.18
MBD3-209ENST00000592012 DDX4Q9NQI0 724 aaKnown RBP22.42■■□□□ 1.18
MBD3-209ENST00000592012 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
MBD3-209ENST00000592012 E2F4Q16254 413 aa22.42■■□□□ 1.18
MBD3-209ENST00000592012 ARMCX5Q6P1M9 558 aa22.42■■□□□ 1.18
MBD3-209ENST00000592012 MED15Q96RN5 788 aa22.42■■□□□ 1.18
MBD3-209ENST00000592012 CCDC194A0A1B0GVG4 234 aa22.41■■□□□ 1.18
MBD3-209ENST00000592012 CBFA2T2O43439 604 aa22.41■■□□□ 1.18
MBD3-209ENST00000592012 SMARCA1P28370 1054 aa22.41■■□□□ 1.18
MBD3-209ENST00000592012 DPYDQ12882 1025 aa22.41■■□□□ 1.18
MBD3-209ENST00000592012 CASP1P29466 404 aa22.41■■□□□ 1.18
MBD3-209ENST00000592012 IQUBQ8NA54 791 aa22.41■■□□□ 1.18
MBD3-209ENST00000592012 ZMYND12Q9H0C1 365 aa22.41■■□□□ 1.18
MBD3-209ENST00000592012 NFE2L3Q9Y4A8 694 aa22.41■■□□□ 1.18
MBD3-209ENST00000592012 QSER1Q2KHR3 1735 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 ZNF18P17022 549 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 CFAP100Q494V2 611 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 CCDC150Q8NCX0 1101 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 C16orf45Q96MC5 204 aaPredicted RBP22.4■■□□□ 1.18
MBD3-209ENST00000592012 GSDMAQ96QA5 445 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 MTMR4Q9NYA4 1195 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 PLIN4Q96Q06 1357 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 COL11A2P13942 1736 aaPredicted RBP22.4■■□□□ 1.18
MBD3-209ENST00000592012 DYNC1I1O14576 645 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 ERCC5P28715 1186 aaPredicted RBP22.4■■□□□ 1.18
MBD3-209ENST00000592012 LONP1P36776 959 aaKnown RBP22.4■■□□□ 1.18
MBD3-209ENST00000592012 USP40Q9NVE5 1235 aa22.4■■□□□ 1.18
MBD3-209ENST00000592012 GOLGB1Q14789 3259 aaKnown RBP22.4■■□□□ 1.18
MBD3-209ENST00000592012 SCNN1DP51172 638 aa22.39■■□□□ 1.18
MBD3-209ENST00000592012 TPD52L1Q16890 204 aaPredicted RBP22.39■■□□□ 1.18
MBD3-209ENST00000592012 CT47A1Q5JQC4 288 aaPredicted RBP22.39■■□□□ 1.18
MBD3-209ENST00000592012 ZNF772Q68DY9 489 aaPredicted RBP22.39■■□□□ 1.18
MBD3-209ENST00000592012 HHIPL2Q6UWX4 724 aa22.39■■□□□ 1.18
MBD3-209ENST00000592012 TMX4Q9H1E5 349 aaPredicted RBP22.39■■□□□ 1.18
MBD3-209ENST00000592012 USP17L5A8MUK1 530 aa22.39■■□□□ 1.17
MBD3-209ENST00000592012 DHX8Q14562 1220 aaKnown RBP22.39■■□□□ 1.17
MBD3-209ENST00000592012 INF2Q27J81 1249 aa22.39■■□□□ 1.17
MBD3-209ENST00000592012 PYM1Q9BRP8 204 aaKnown RBP22.39■■□□□ 1.17
MBD3-209ENST00000592012 USP27XA6NNY8 438 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 SFPQP23246 707 aaKnown RBP eCLIP22.38■■□□□ 1.17
MBD3-209ENST00000592012 APOBEC3HQ6NTF7 200 aaKnown RBP22.38■■□□□ 1.17
MBD3-209ENST00000592012 PDXDC2PQ6P474 469 aa22.38■■□□□ 1.17
MBD3-209ENST00000592012 TRMT44Q8IYL2 757 aaKnown RBP22.38■■□□□ 1.17
MBD3-209ENST00000592012 RRP36Q96EU6 259 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms