RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 MOV10L1Q9BXT6 1211 aaKnown RBP32.3■■■□□ 2.76
SMAD4-213ENST00000591914 SPATC1LQ9H0A9 340 aa32.3■■■□□ 2.76
SMAD4-213ENST00000591914 RNF208Q9H0X6 261 aa32.3■■■□□ 2.76
SMAD4-213ENST00000591914 TSPY2A6NKD2 308 aa32.29■■■□□ 2.76
SMAD4-213ENST00000591914 HMGCRP04035 888 aa32.29■■■□□ 2.76
SMAD4-213ENST00000591914 CYP2B6P20813 491 aa32.29■■■□□ 2.76
SMAD4-213ENST00000591914 GMCL1P1Q8NEA9 526 aa32.29■■■□□ 2.76
SMAD4-213ENST00000591914 UNC93B1Q9H1C4 597 aa32.29■■■□□ 2.76
SMAD4-213ENST00000591914 CWC22Q9HCG8 908 aaKnown RBP32.29■■■□□ 2.76
SMAD4-213ENST00000591914 GJB1P08034 283 aa32.28■■■□□ 2.76
SMAD4-213ENST00000591914 NUP88Q99567 741 aaPredicted RBP32.28■■■□□ 2.76
SMAD4-213ENST00000591914 PPP1R9AQ9ULJ8 1098 aa32.28■■■□□ 2.76
SMAD4-213ENST00000591914 PTPREP23469 700 aa32.27■■■□□ 2.76
SMAD4-213ENST00000591914 RGS2P41220 211 aa32.27■■■□□ 2.76
SMAD4-213ENST00000591914 PPP4R3BQ5MIZ7 849 aa32.27■■■□□ 2.76
SMAD4-213ENST00000591914 WDR78Q5VTH9 848 aa32.27■■■□□ 2.76
SMAD4-213ENST00000591914 LRRC47Q8N1G4 583 aaKnown RBP32.27■■■□□ 2.76
SMAD4-213ENST00000591914 SHCBP1Q8NEM2 672 aa32.27■■■□□ 2.76
SMAD4-213ENST00000591914 TRIB2Q92519 343 aa32.27■■■□□ 2.76
SMAD4-213ENST00000591914 NBPF3Q9H094 633 aa32.27■■■□□ 2.76
SMAD4-213ENST00000591914 IL17RBQ9NRM6 502 aa32.27■■■□□ 2.76
SMAD4-213ENST00000591914 SLC15A5A6NIM6 579 aa32.26■■■□□ 2.75
SMAD4-213ENST00000591914 RANBP6O60518 1105 aaKnown RBP32.26■■■□□ 2.75
SMAD4-213ENST00000591914 MAP2K5Q13163 448 aa32.26■■■□□ 2.75
SMAD4-213ENST00000591914 SAMD1Q6SPF0 538 aaPredicted RBP32.26■■■□□ 2.75
SMAD4-213ENST00000591914 NKX2-3Q8TAU0 364 aa32.26■■■□□ 2.75
SMAD4-213ENST00000591914 APBA2Q99767 749 aa32.26■■■□□ 2.75
SMAD4-213ENST00000591914 COL11A1P12107 1806 aaPredicted RBP32.26■■■□□ 2.75
SMAD4-213ENST00000591914 VWA5AO00534 786 aa32.25■■■□□ 2.75
SMAD4-213ENST00000591914 GJA8P48165 433 aa32.25■■■□□ 2.75
SMAD4-213ENST00000591914 HAND2P61296 217 aa32.25■■■□□ 2.75
SMAD4-213ENST00000591914 GRB14Q14449 540 aa32.25■■■□□ 2.75
SMAD4-213ENST00000591914 TMEM132BQ14DG7 1078 aa32.25■■■□□ 2.75
SMAD4-213ENST00000591914 TRMT44Q8IYL2 757 aaKnown RBP32.25■■■□□ 2.75
SMAD4-213ENST00000591914 SHISA4Q96DD7 197 aa32.25■■■□□ 2.75
SMAD4-213ENST00000591914 IVNS1ABPQ9Y6Y0 642 aa32.25■■■□□ 2.75
SMAD4-213ENST00000591914 LAMA4Q16363 1823 aa32.24■■■□□ 2.75
SMAD4-213ENST00000591914 PCP11498 1178 aaKnown RBP32.24■■■□□ 2.75
SMAD4-213ENST00000591914 NOVP48745 357 aa32.24■■■□□ 2.75
SMAD4-213ENST00000591914 SLF1Q9BQI6 1058 aa32.24■■■□□ 2.75
SMAD4-213ENST00000591914 DSCC1Q9BVC3 393 aa32.24■■■□□ 2.75
SMAD4-213ENST00000591914 PAK6Q9NQU5 681 aaPredicted RBP32.24■■■□□ 2.75
SMAD4-213ENST00000591914 ZNF236Q9UL36 1845 aa32.23■■■□□ 2.75
SMAD4-213ENST00000591914 NMT2O60551 498 aa32.23■■■□□ 2.75
SMAD4-213ENST00000591914 ERCC3P19447 782 aa32.23■■■□□ 2.75
SMAD4-213ENST00000591914 TRIM32Q13049 653 aa32.23■■■□□ 2.75
SMAD4-213ENST00000591914 PLS1Q14651 629 aa32.23■■■□□ 2.75
SMAD4-213ENST00000591914 STAG1Q8WVM7 1258 aa32.23■■■□□ 2.75
SMAD4-213ENST00000591914 IL25Q9H293 177 aa32.23■■■□□ 2.75
SMAD4-213ENST00000591914 MROH8Q9H579 483 aa32.23■■■□□ 2.75
SMAD4-213ENST00000591914 AKNAD1Q5T1N1 836 aa32.22■■■□□ 2.75
SMAD4-213ENST00000591914 TBC1D10CQ8IV04 446 aa32.22■■■□□ 2.75
SMAD4-213ENST00000591914 REPS2Q8NFH8 660 aa32.22■■■□□ 2.75
SMAD4-213ENST00000591914 TOMM22Q9NS69 142 aa32.22■■■□□ 2.75
SMAD4-213ENST00000591914 STX8Q9UNK0 236 aa32.22■■■□□ 2.75
SMAD4-213ENST00000591914 PDE4DIPQ5VU43 2346 aa32.22■■■□□ 2.75
SMAD4-213ENST00000591914 STRNO43815 780 aa32.21■■■□□ 2.75
SMAD4-213ENST00000591914 HOXC6P09630 235 aa32.21■■■□□ 2.75
SMAD4-213ENST00000591914 ZKSCAN1P17029 563 aaPredicted RBP32.21■■■□□ 2.75
SMAD4-213ENST00000591914 RRP12Q5JTH9 1297 aaKnown RBP32.21■■■□□ 2.75
SMAD4-213ENST00000591914 MAP3K21Q5TCX8 1036 aa32.21■■■□□ 2.75
SMAD4-213ENST00000591914 SLFN13Q68D06 897 aa32.21■■■□□ 2.75
SMAD4-213ENST00000591914 PRPF38AQ8NAV1 312 aaKnown RBP32.21■■■□□ 2.75
SMAD4-213ENST00000591914 U2AF1L4Q8WU68 220 aaKnown RBP32.21■■■□□ 2.75
SMAD4-213ENST00000591914 GMCL1Q96IK5 515 aa32.21■■■□□ 2.75
SMAD4-213ENST00000591914 ZNF214Q9UL59 606 aaPredicted RBP32.21■■■□□ 2.75
SMAD4-213ENST00000591914 ZNF213O14771 459 aa32.2■■■□□ 2.75
SMAD4-213ENST00000591914 CCL14Q16627 93 aa32.2■■■□□ 2.75
SMAD4-213ENST00000591914 MFSD6Q6ZSS7 791 aa32.2■■■□□ 2.75
SMAD4-213ENST00000591914 XRN2Q9H0D6 950 aaKnown RBP eCLIP32.2■■■□□ 2.751e-6■■■□□ 18.8
SMAD4-213ENST00000591914 RNF41Q9H4P4 317 aaPredicted RBP32.2■■■□□ 2.75
SMAD4-213ENST00000591914 FEM1BQ9UK73 627 aa32.2■■■□□ 2.75
SMAD4-213ENST00000591914 RAD50Q92878 1312 aa32.2■■■□□ 2.74
SMAD4-213ENST00000591914 SGPL1O95470 568 aa32.19■■■□□ 2.74
SMAD4-213ENST00000591914 SLC25A27O95847 323 aa32.19■■■□□ 2.74
SMAD4-213ENST00000591914 BMP3P12645 472 aa32.19■■■□□ 2.74
SMAD4-213ENST00000591914 CHMLP26374 656 aa32.19■■■□□ 2.74
SMAD4-213ENST00000591914 CENPQQ7L2Z9 268 aaPredicted RBP32.19■■■□□ 2.74
SMAD4-213ENST00000591914 NCAPG2Q86XI2 1143 aa32.19■■■□□ 2.74
SMAD4-213ENST00000591914 RIOX2Q8IUF8 465 aa32.19■■■□□ 2.74
SMAD4-213ENST00000591914 TCP11L1Q9NUJ3 509 aa32.19■■■□□ 2.74
SMAD4-213ENST00000591914 RPTORQ8N122 1335 aa32.19■■■□□ 2.74
SMAD4-213ENST00000591914 ABRAQ8N0Z2 381 aa32.18■■■□□ 2.74
SMAD4-213ENST00000591914 DEFB118Q96PH6 123 aa32.18■■■□□ 2.74
SMAD4-213ENST00000591914 HMX1Q9NP08 348 aaPredicted RBP32.18■■■□□ 2.74
SMAD4-213ENST00000591914 ADORA2AP29274 412 aa32.17■■■□□ 2.74
SMAD4-213ENST00000591914 STAT3P40763 770 aa32.17■■■□□ 2.74
SMAD4-213ENST00000591914 PRKAR2AP13861 404 aaKnown RBP32.16■■■□□ 2.74
SMAD4-213ENST00000591914 CAPN2P17655 700 aa32.16■■■□□ 2.74
SMAD4-213ENST00000591914 RUFY2Q8WXA3 655 aa32.16■■■□□ 2.74
SMAD4-213ENST00000591914 FLRT1Q9NZU1 646 aa32.16■■■□□ 2.74
SMAD4-213ENST00000591914 CTNNA3Q9UI47 895 aa32.16■■■□□ 2.74
SMAD4-213ENST00000591914 NEDD4P46934 1319 aa32.16■■■□□ 2.74
SMAD4-213ENST00000591914 COPB2P35606 906 aa32.15■■■□□ 2.74
SMAD4-213ENST00000591914 SLC1A4P43007 532 aa32.15■■■□□ 2.74
SMAD4-213ENST00000591914 NT5C2P49902 561 aa32.15■■■□□ 2.74
SMAD4-213ENST00000591914 CACNB2Q08289 660 aaPredicted RBP32.15■■■□□ 2.74
SMAD4-213ENST00000591914 NPLOC4Q8TAT6 608 aa32.15■■■□□ 2.74
SMAD4-213ENST00000591914 KIFC2Q96AC6 838 aa32.15■■■□□ 2.74
SMAD4-213ENST00000591914 TEX13BQ9BXU2 312 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms